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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0299900 |
| Transcript ID | LotjaGi6g1v0299900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mediator of RNA polymerase II transcription subunit 33A; TAIR: AT3G23590.1 REF4-related 1; Swiss-Prot: sp|Q9LUG9|MD33A_ARATH Mediator of RNA polymerase II transcription subunit 33A; TrEMBL-Plants: tr|I1MFD7|I1MFD7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0299900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:61770740..61778047) extracted from Lotus japonicus Gifu genome v1.2.
GTTGAACTCGCGACGGCGACGATGGAGGTTTCCGCCGCGCTGAGCAACTGGAGCAAGGCGGCGGAGCTGACGAAGGCGGC GCAGGAGAAAGGGAGTGATCCTCTGGTTTGGGCTATTCAGATGTACTCCAACTTGAACTCTGCCGGAGAGTCTCTTCCCT CACCGGAACTCGCTGAGTTCTTGGTCTCTTACATTTGCTGGGAGAATAATGTTCCCATTCTCTGGAAGTTTCTCGATAAG GCTCTTATGCTCAAGATCGTTCCTCCTATGCTTCTTCTCGCTCTCCTCTCTCTCAGGTTTCACCTTCATCTTTGGCTCGT AATTTCTATACACTGTCCAGCATTCTGATCCATATGTTAGGTTGTTCAATTCACACTACAGAGACAGGGTTCCCTGTTAG GCCATGAATCTTTGTAGTTTTATGTGTTGACTAATTATTGCTCTTTGGTGTTTGTTAGATTAGAGCCATGTTTATCTGTC TATATCGAAACAAGGTCTATATGTCTGTTGTGTTCCCTGATGTATTGCTGTTTTTGTGTGTTGATATGTTATGTTGATAT CTCTATTGTTTTTTGCAGGGTTATTCCATGTAGACATGTCCAACCTGCAGCATATAGGCTATATTTGGAACTCCTCAAGA GGCATGCCTTTGATCTTCAATATCAGATTAACCGGCCGGATTACGAAAAGTAAGCTGGAAATGATATGATACTTTTTTAT TCGACAAGTTTCTTGCTTCATTTGCTTACAACTTCCAAGTTATTGTGTCCAGTGATGTTAATTCTTGTGCTTATGCTATG GACAGGGTCATGAAATCTATAGATGATGTTCTTCATCTTTCCGACATATTTGGCATGTCACATAGTGAGCCTGGCATTCT GGTGGTTGAATTTATTTTTTCGATTGTCTGGCAGTTGCTTGATGCATCATTGGATGATGAAGGTTTGCTGGAATTTATTC CTGAAAAAAATTCTAGATGGGCAATACTGTATCAAGAAATGGATCTGGATAGGCATGACAATTACAGTGATAAAAAGGCT GAACAACTTGAGATATTGCAAAATGCAAATACACTTATGGCTGTTGAGATAATTGGGCAGTTTTTGCAGGATAAAAAATC TTCAAGGCTTCTTTACTTGGCTCGCCGAAATTTGTAAGTATTTGAAACCTTTATATTTATCCTTCACACTTTCTGTCAAA TTTTACCATAGTCAAGCAGAATTTATCTATTCATTCTTAAATTTCCTATCCAATTCATTTGGCATTTGATTCCCCATTTT CCATTTCCATTTTTCTTCGGTTAAAAATGACTCCGAAGGATTCATAGAATTATTTGTTCTTTTACAGTTATTATGGTTGT GATTTCTTGCAGTTTTTTTTTTCTCACAAATGTTGATTTCACCCTACCACATCTTGTGGGATAAGGCTTGATTATTGTTG TTGCCTTTTTGGACTTTATTGGCTCAACATCTTACTTCCATTTTACCAGGCCTGCACATTGGCTAAGTTTTGTTCAACGG CTACAGCTGCTTGGAACAAATTCATTAGCATTGAGAAAATCAAGAATTCTATGTCCTGAAGCACTTTCGCATCTGACTTC AGATACTTGTATGGCATTGCCTCGAGAATGCAAAACAAATTCACAGCAAAAGTTCCAGTCAGTTATGGCTTTTGAATATC TTTCTTCTTCTGCATCACTTTGTCATGGTGCTAGTCATTCTGCTCTTTGGATTCCTCTTGATCTGATGCTGGAGGATGCC ATGGACGGCTATCAAGTCAGTGCAACTAGTTCTATTGAAATAATTAGCGGTAAGACAGAGAATAGCAATTGGAATCTTAC TGAAATGGTAGATATAGTCTTCTTAACTTCAATTTAGGAACTTGTGAGATGAAAAAATTGCATTTTGTAGGTTTGATAAA GACCCTCCGAGCAATAAATGGCACCTCTTGGCATGACACTTTCCTTGGCCTCTGGTTAGCAACTCTTCGTCTTGTTCAGA GGGTAAATTTCTCTCTCCAATTCAATGTGTCTTCCTATGAAATTTTGGTTTTAAATTGTCTTGTACATTAATTACTTCTA GTATTCCATTACCATAAACTTTGCAGTTAAGAAATTTGCATCAGTGGTTTACACCTTTAATTTAACTATTGATATATTTA TAGGAAAGAGATCCGATTGAGGGCCCAATGCCTCATCTTGATACTCGCTTATTCATGCTGTTTTGTATCCTACCTCTTGT TGTTGCCAATCTTATTGAGGAGGAGGAAAGGACACCGGTAGATGAAAAAGACAATGGCCCTACAGATCACTGGAAAGAGA AAATGGTTCCAGGAAAATGTCGCAATGATTTAGTCTCAAGTCTCCAGGTATTGGGTGATTATCAGAGCTTGCTCCTTCCA CCTCAATCTGTTGTTGCTGCTGCAAATCAGGCTGCTGCAAAAGCAATGCTATTTGTTTCTGGCATAGGGAATGCATATTT TGACTGTCTCACCATGACAGAGATGCCAGTGAACTGTTGTAAGGGATATTGCTTTTATTGTCAATCGTAATTTGTACATG AATCTTTGACAACTAGAGTAATTTCTATCAATTTCAGGAATTTGTACAGCTCTAACCACTTATTTTCCTAAATCCTAATA AATTTTCCAAGAAATCCTTTGTTATAGTTTTCCATATATTTTTTAGATTTTTTTTTTTCTTTTCAGCTGGAAACATGCGT CATCTGATAGTTGAGGCATGTATTGCCCGAAATCTACTCGATACATCTGCATACTTATGGCCAGGTTATGTGAGTGGACG GATCAATCAGATACCTCAGTGTATGCCAGCTCAAGTACCTGGCTGGTCATCATTTATGAAGGGAGCCCCGCTTACTTCTG TGATGGTTAATGCTCTGGTTTCAAGTCCTGCTACAAGGTATGATCGAACTTTTGTGTATTCAGGCAATTGGTTTATTGCC CTATTTGGGTGTAATTTTGAGAACTAGCAAACTTCTGATTGAGCAAAGGTGTTACATTATAGTGTTTATTCTACTCCCCT CTGTTAAGCCTATAGCCACAATGCTATGACCTTTATCATATGGGTGAATTTAAGGTTTTCTTTATTTTAATTTCATTTTA AATGAATCCGTTGCTGTGTAGATGTTCAGAGATAATTTACTAAATACAACATGATTTGATCATAAACTTAATTTGTAACA TAACAAAAGCCACTACAAGCTGGTAGACTTAAAATTACTTTCTAAAATTCTGTGGCCTGGTCTTCAGTTTTTCTTTTTCT TTCCTGAAGCCAGGTATGTCAGATGCTCTTTTTTGTAAATTTACCAAAAGGTAAAGCAACTGAATTTACGCTCCTGGATT TGATGGAAGCTTAGCAGAACTGGAGAAAATTTTTGAAATTGCACTTGGGGGATCAGAAGATGAAAAGATATCTGCTGCTG CTATTCTTTGTGGAGCATCCTTAATTCGGGGATGGAATATACAGGTAGTGAAGTTAGACAGTAGCAAATATGAAAACTTC AACTTGCTTAGTAGTGTAGACAGTAGACTTGGAGAACATATCCTTCTTCTAAACCACTTTCCCATTCTAATTTGGAACTT GGATCTCTGTTTTATGCAGGAGCACACTGTTCATTTCATTCTTAGGTTATTATCTCCCCCAGTACCAGCAGGGAACACTG AAGGAAATAACTATTTGATTAATTATGCTCCAATACTAAATGCACTCTTTGTCGGAATTGCTTCTGTCGATTGCGTTCAA ATATTTTCACTGCATGGCTTGGTAAGTTTAATTTAATCCCAAATTTAAAATCTTGTTGATATTTGATAGAACCTATAATT TATATAAATGAAAGCTGAGGATCAGCTCCTACATTAGATGAAATCCTCTGAAAACTGAATTGCAACCAGAAAGATTGAAT TAGAAAATTATGTTGAAGATAACCAAATACAGCCTAAATAAAAGCTAATTTATATAAATGAAAGCAAAATTTATTGAAAT CCTTCTAGAAGATTCTGATGTTATATGTGTAGATCATGTTCCCTCGTAGTGTGATAATCTAGTTGCAACATTGCAATACA GTCTTTTACAGTTTTACGAGAGGACAAAGCATAATGCAATGAATTACTGTATTGTCACTTTGTTAGTATGTTGTTACAAG TGAAGAGATTTCATATACCTTTAACACCCTTGAATTTCCAAGTTGCTGACATGTTCCCTAATGCCCTGAAGAAGGATGAT TTTGTGAGGCTGTGACTATTAGAATTTGGGTTAGACCTAAACACTAACTTGGCCATATCTCTAGTCGATGTTGGACTTCA CAACACATCCCCTCACGCCCAAGGCTGGACATCTGGAGTGTGGAAATTACGAGAATGAACATCTGCAAGTGACTCATATA TGGTTGGTCTCCAAAAATGGATCTAGGATAGACTCTAACACCATATTAGAATTTGAGTTAGGCCTAACTCAATCCCAAAA GCTAGCTTAGAACTTAGAAGTACTTATTTGACCATATGTCTAGTCAATGTGAGACTTCTCAACAGTGACATTGACAAGCT TAGCATGATGAAATTCTTTGCTTCAACTGTTTGTTCAGTAATTAATGTAATTGATGCTATAATTAGCAAGTAATTACTTA GCTGTCAATAGCACAATATGAACAGAAAACTAGGAAGAATTTAGGCAGCTAATTAGGAGATATTCAACTGGAAAATTTAT TTTCTATTTATTATATAGTTTTTTTACCTTTGTATAGGAGCTGGCATATGATTCTGATATATATATATATATATATATAT ATAGGAACTCTTTTCTTTTTTCAATTTGAATTAATGCATTTCCCAAATTCCAACCAGGTTCCACAGCTTGCCTGTTCATT GATGCCAATATGCGAGGTTTTAGGGTCATGTTTACCTAATATATCATGGACGTTACCATCAGGGGAAGAAATATCTGCCC ATGCTGTGTTTTCAAATGCATTTATTCTTCTCTTAAAGCTATGGAGATTTAACCGTCCTCCCCTTGAATATGGAATTGGA GAAGTACCCACAGTTGGCTCTCAATTAACTCCTGAATACTTATTGCTGGTACGAAATTCCCACTTAATGTCAGCTGGTAA CGTCCACAAAGATCAATACAGGAGGAGACTCTCAGAAATTGCAAGTTTATCATCGCCAAATTCGGTATTTGTTGACTCCT TTCCAAAATTAAAAGTTTGGTATCGGCAGCATCAAGCATGTATAGCTTCAACTCTCTCTGGCCTTGTTCATGGGACCCCT TTTCATCAGATTGTTGAGGGGCTTCTTAACATGATGTTCAGAAAGATTAATCGAGGAAGCCAGACTACTATTATATCGGG AAGCAGTAGCTCTTCTGGACTTGGAAATGAAGATGCCTGTATAGGGCCAAAGTTGCCTGCTTGGGATATTCTTGAAGCCA TTCCCTTCGTAATTGATGCTGCTCTAACAGCCTGTGCTCATGGAAGACTGTCTCCGCGTGAGTTGGCAACAGGTATGTGT GTTTGATCAGATAAGGCCTAAGGGAACACACCAAATAGCTTGCAGGGCTCATGATTTCTAAGTTACAAAGAGTCTAACTG GCTGTTGTAAAACCTTAAAAATGTTTCATCTTCAAAATTCTCATTGTTTTGTCTTTAACCTCTAAATATAGAACAATCAG ACAAGTTCATGTTCATGTAGTTCTTCCTTGATGTATGCAACAATATCATAATTCTAAATGCTTTCTTAATATTTTTATCA GGTCTTAAAGATTTAGCTGATTTCCTTCCTGCATCTCTTGCAACCATAATTAGTTACTTCTGTGCTGAAGTAACTCGCGG AGTTTGGAAACCAGCATCTATGAACGGAACAGATTGGCCAAGCCCCGCTGCAAAGCTACAGAATGTTGAGGAGCAGATCA AGAAAATTTTGGCTGCAACTGGTGTTGTTGTGCCTAGCCTTGCTCCAGGTTTGTCTTGTTGTTCTGACCATAAATTCTGA CACTTCTTAAAATCCTGAAAATGCTTTTTCAGCAAAAACAATATACATTTACAAGGATCCAACATATTAATTACAATCTG CATCCATATAATTCATCTTTTACACTGCCTGAACCAAGTATTAATATTGATTGCTGTTTAGAAATGTCCTCCATCTTATT TTTCTCTTCCAATGGGCATCATTTCCACAGGAGACACCTCTCCTGCCACACTTCCATTGCCCTTGGCTGCCTTCACTAGC CTTACCATAACATACAAAGTTGATAGATCATCAGAGCGTTTTCTTAATTTAGCTGGCCAAACATTGGAGAGCCTTGCTGC AAGTTGTCCATGGCCTTGCATGCCAATTGTGGCTTCCTTGTGGACCCAAAAGGCAAAACGTTGGACTGACTTCCTTGTCT TCTCAGCATCTAGAACCGTCTTCCTCCACAACAGTGATGCAGTAGTCCAACTTCTTAAAAGCTGCTTCACAGCTACCCTT GGAATGAATGGCTCTCCTATCTCATCCAGTGGTGGTGTTGGAGCTCTCCTTGGTCATGGATTTAAGGCCCATTTAAGTGG AGGGATCTGCCCTGTTGCTCCTGGTATTCTTTATTTACGGGCTTATCGGTCAATCAGAGACATGGTTTTCCTGACGGAAG AAATCCTTTCCATCTTGATGCAGTCAGTGAGAGAAATAGTGTGTGGGGGGTTACCAAAGGAGCGATTGGCAAAGTTGAAA GCAACGAAAGAAGGCATGAAATATGGACAGGTTTCGCTTGCTGCCTCAATGAGCCGGGTGAAGCTTGCAGCTGCCCTTGG GGCTTCTTTAGTATGGATATCTGGAGGGTTGACGCTGGTTCAATTATTAATAAAAGAAACTTTGCCATCATGGTTTATAT CTGTTCACGGCCTAGAGCAGGAAGAAAAGTGTGATGGAATGGTTACAATGCTAGGAGGATATGCACTTGCTTACTTTGCT GTTCTTTGTGGGGCTTTTGCTTGGGGAGTTGATTCATCATCATCAGCTTCAAAGCGACGTCCAAAAGTTCTAGGTTGCCA CATGGAGTTTCTTGCAAGTGCACTTGATGGTAAGATATCGCTTGGCTGTGATTCTGCTACTTGGCGTGCCTATGTGTCAG GTTTTGTGAGCTTGATGGTAGGTTGCACACCAAACTGGGTACTGGAAGTTGATGTACAAGTGTTGAAGAGACTGAGCAAT GGGTTGAGACAGTTAAACGAGGAAGAGCTTGCTCTTGCTTTGTTGTCCGCTGGTGGTGTAGGTACCATGGGTGCGGCAGC TGAGCTCATCATTGACACTGAAATGTAA
CDS sequence (LotjaGi6g1v0299900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGTTTCCGCCGCGCTGAGCAACTGGAGCAAGGCGGCGGAGCTGACGAAGGCGGCGCAGGAGAAAGGGAGTGATCC TCTGGTTTGGGCTATTCAGATGTACTCCAACTTGAACTCTGCCGGAGAGTCTCTTCCCTCACCGGAACTCGCTGAGTTCT TGGTCTCTTACATTTGCTGGGAGAATAATGTTCCCATTCTCTGGAAGTTTCTCGATAAGGCTCTTATGCTCAAGATCGTT CCTCCTATGCTTCTTCTCGCTCTCCTCTCTCTCAGGGTTATTCCATGTAGACATGTCCAACCTGCAGCATATAGGCTATA TTTGGAACTCCTCAAGAGGCATGCCTTTGATCTTCAATATCAGATTAACCGGCCGGATTACGAAAAGGTCATGAAATCTA TAGATGATGTTCTTCATCTTTCCGACATATTTGGCATGTCACATAGTGAGCCTGGCATTCTGGTGGTTGAATTTATTTTT TCGATTGTCTGGCAGTTGCTTGATGCATCATTGGATGATGAAGGTTTGCTGGAATTTATTCCTGAAAAAAATTCTAGATG GGCAATACTGTATCAAGAAATGGATCTGGATAGGCATGACAATTACAGTGATAAAAAGGCTGAACAACTTGAGATATTGC AAAATGCAAATACACTTATGGCTGTTGAGATAATTGGGCAGTTTTTGCAGGATAAAAAATCTTCAAGGCTTCTTTACTTG GCTCGCCGAAATTTGCCTGCACATTGGCTAAGTTTTGTTCAACGGCTACAGCTGCTTGGAACAAATTCATTAGCATTGAG AAAATCAAGAATTCTATGTCCTGAAGCACTTTCGCATCTGACTTCAGATACTTGTATGGCATTGCCTCGAGAATGCAAAA CAAATTCACAGCAAAAGTTCCAGTCAGTTATGGCTTTTGAATATCTTTCTTCTTCTGCATCACTTTGTCATGGTGCTAGT CATTCTGCTCTTTGGATTCCTCTTGATCTGATGCTGGAGGATGCCATGGACGGCTATCAAGTCAGTGCAACTAGTTCTAT TGAAATAATTAGCGGTTTGATAAAGACCCTCCGAGCAATAAATGGCACCTCTTGGCATGACACTTTCCTTGGCCTCTGGT TAGCAACTCTTCGTCTTGTTCAGAGGGAAAGAGATCCGATTGAGGGCCCAATGCCTCATCTTGATACTCGCTTATTCATG CTGTTTTGTATCCTACCTCTTGTTGTTGCCAATCTTATTGAGGAGGAGGAAAGGACACCGGTAGATGAAAAAGACAATGG CCCTACAGATCACTGGAAAGAGAAAATGGTTCCAGGAAAATGTCGCAATGATTTAGTCTCAAGTCTCCAGGTATTGGGTG ATTATCAGAGCTTGCTCCTTCCACCTCAATCTGTTGTTGCTGCTGCAAATCAGGCTGCTGCAAAAGCAATGCTATTTGTT TCTGGCATAGGGAATGCATATTTTGACTGTCTCACCATGACAGAGATGCCAGTGAACTGTTCTGGAAACATGCGTCATCT GATAGTTGAGGCATGTATTGCCCGAAATCTACTCGATACATCTGCATACTTATGGCCAGGTTATGTGAGTGGACGGATCA ATCAGATACCTCAGTGTATGCCAGCTCAAGTACCTGGCTGGTCATCATTTATGAAGGGAGCCCCGCTTACTTCTGTGATG GTTAATGCTCTGGTTTCAAGTCCTGCTACAAGCTTAGCAGAACTGGAGAAAATTTTTGAAATTGCACTTGGGGGATCAGA AGATGAAAAGATATCTGCTGCTGCTATTCTTTGTGGAGCATCCTTAATTCGGGGATGGAATATACAGGAGCACACTGTTC ATTTCATTCTTAGGTTATTATCTCCCCCAGTACCAGCAGGGAACACTGAAGGAAATAACTATTTGATTAATTATGCTCCA ATACTAAATGCACTCTTTGTCGGAATTGCTTCTGTCGATTGCGTTCAAATATTTTCACTGCATGGCTTGGTTCCACAGCT TGCCTGTTCATTGATGCCAATATGCGAGGTTTTAGGGTCATGTTTACCTAATATATCATGGACGTTACCATCAGGGGAAG AAATATCTGCCCATGCTGTGTTTTCAAATGCATTTATTCTTCTCTTAAAGCTATGGAGATTTAACCGTCCTCCCCTTGAA TATGGAATTGGAGAAGTACCCACAGTTGGCTCTCAATTAACTCCTGAATACTTATTGCTGGTACGAAATTCCCACTTAAT GTCAGCTGGTAACGTCCACAAAGATCAATACAGGAGGAGACTCTCAGAAATTGCAAGTTTATCATCGCCAAATTCGGTAT TTGTTGACTCCTTTCCAAAATTAAAAGTTTGGTATCGGCAGCATCAAGCATGTATAGCTTCAACTCTCTCTGGCCTTGTT CATGGGACCCCTTTTCATCAGATTGTTGAGGGGCTTCTTAACATGATGTTCAGAAAGATTAATCGAGGAAGCCAGACTAC TATTATATCGGGAAGCAGTAGCTCTTCTGGACTTGGAAATGAAGATGCCTGTATAGGGCCAAAGTTGCCTGCTTGGGATA TTCTTGAAGCCATTCCCTTCGTAATTGATGCTGCTCTAACAGCCTGTGCTCATGGAAGACTGTCTCCGCGTGAGTTGGCA ACAGGTCTTAAAGATTTAGCTGATTTCCTTCCTGCATCTCTTGCAACCATAATTAGTTACTTCTGTGCTGAAGTAACTCG CGGAGTTTGGAAACCAGCATCTATGAACGGAACAGATTGGCCAAGCCCCGCTGCAAAGCTACAGAATGTTGAGGAGCAGA TCAAGAAAATTTTGGCTGCAACTGGTGTTGTTGTGCCTAGCCTTGCTCCAGGTTTGTCTTCTCCTGCCACACTTCCATTG CCCTTGGCTGCCTTCACTAGCCTTACCATAACATACAAAGTTGATAGATCATCAGAGCGTTTTCTTAATTTAGCTGGCCA AACATTGGAGAGCCTTGCTGCAAGTTGTCCATGGCCTTGCATGCCAATTGTGGCTTCCTTGTGGACCCAAAAGGCAAAAC GTTGGACTGACTTCCTTGTCTTCTCAGCATCTAGAACCGTCTTCCTCCACAACAGTGATGCAGTAGTCCAACTTCTTAAA AGCTGCTTCACAGCTACCCTTGGAATGAATGGCTCTCCTATCTCATCCAGTGGTGGTGTTGGAGCTCTCCTTGGTCATGG ATTTAAGGCCCATTTAAGTGGAGGGATCTGCCCTGTTGCTCCTGGTATTCTTTATTTACGGGCTTATCGGTCAATCAGAG ACATGGTTTTCCTGACGGAAGAAATCCTTTCCATCTTGATGCAGTCAGTGAGAGAAATAGTGTGTGGGGGGTTACCAAAG GAGCGATTGGCAAAGTTGAAAGCAACGAAAGAAGGCATGAAATATGGACAGGTTTCGCTTGCTGCCTCAATGAGCCGGGT GAAGCTTGCAGCTGCCCTTGGGGCTTCTTTAGTATGGATATCTGGAGGGTTGACGCTGGTTCAATTATTAATAAAAGAAA CTTTGCCATCATGGTTTATATCTGTTCACGGCCTAGAGCAGGAAGAAAAGTGTGATGGAATGGTTACAATGCTAGGAGGA TATGCACTTGCTTACTTTGCTGTTCTTTGTGGGGCTTTTGCTTGGGGAGTTGATTCATCATCATCAGCTTCAAAGCGACG TCCAAAAGTTCTAGGTTGCCACATGGAGTTTCTTGCAAGTGCACTTGATGGTAAGATATCGCTTGGCTGTGATTCTGCTA CTTGGCGTGCCTATGTGTCAGGTTTTGTGAGCTTGATGGTAGGTTGCACACCAAACTGGGTACTGGAAGTTGATGTACAA GTGTTGAAGAGACTGAGCAATGGGTTGAGACAGTTAAACGAGGAAGAGCTTGCTCTTGCTTTGTTGTCCGCTGGTGGTGT AGGTACCATGGGTGCGGCAGCTGAGCTCATCATTGACACTGAAATGTAA
Protein sequence (LotjaGi6g1v0299900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVSAALSNWSKAAELTKAAQEKGSDPLVWAIQMYSNLNSAGESLPSPELAEFLVSYICWENNVPILWKFLDKALMLKIV PPMLLLALLSLRVIPCRHVQPAAYRLYLELLKRHAFDLQYQINRPDYEKVMKSIDDVLHLSDIFGMSHSEPGILVVEFIF SIVWQLLDASLDDEGLLEFIPEKNSRWAILYQEMDLDRHDNYSDKKAEQLEILQNANTLMAVEIIGQFLQDKKSSRLLYL ARRNLPAHWLSFVQRLQLLGTNSLALRKSRILCPEALSHLTSDTCMALPRECKTNSQQKFQSVMAFEYLSSSASLCHGAS HSALWIPLDLMLEDAMDGYQVSATSSIEIISGLIKTLRAINGTSWHDTFLGLWLATLRLVQRERDPIEGPMPHLDTRLFM LFCILPLVVANLIEEEERTPVDEKDNGPTDHWKEKMVPGKCRNDLVSSLQVLGDYQSLLLPPQSVVAAANQAAAKAMLFV SGIGNAYFDCLTMTEMPVNCSGNMRHLIVEACIARNLLDTSAYLWPGYVSGRINQIPQCMPAQVPGWSSFMKGAPLTSVM VNALVSSPATSLAELEKIFEIALGGSEDEKISAAAILCGASLIRGWNIQEHTVHFILRLLSPPVPAGNTEGNNYLINYAP ILNALFVGIASVDCVQIFSLHGLVPQLACSLMPICEVLGSCLPNISWTLPSGEEISAHAVFSNAFILLLKLWRFNRPPLE YGIGEVPTVGSQLTPEYLLLVRNSHLMSAGNVHKDQYRRRLSEIASLSSPNSVFVDSFPKLKVWYRQHQACIASTLSGLV HGTPFHQIVEGLLNMMFRKINRGSQTTIISGSSSSSGLGNEDACIGPKLPAWDILEAIPFVIDAALTACAHGRLSPRELA TGLKDLADFLPASLATIISYFCAEVTRGVWKPASMNGTDWPSPAAKLQNVEEQIKKILAATGVVVPSLAPGLSSPATLPL PLAAFTSLTITYKVDRSSERFLNLAGQTLESLAASCPWPCMPIVASLWTQKAKRWTDFLVFSASRTVFLHNSDAVVQLLK SCFTATLGMNGSPISSSGGVGALLGHGFKAHLSGGICPVAPGILYLRAYRSIRDMVFLTEEILSILMQSVREIVCGGLPK ERLAKLKATKEGMKYGQVSLAASMSRVKLAAALGASLVWISGGLTLVQLLIKETLPSWFISVHGLEQEEKCDGMVTMLGG YALAYFAVLCGAFAWGVDSSSSASKRRPKVLGCHMEFLASALDGKISLGCDSATWRAYVSGFVSLMVGCTPNWVLEVDVQ VLKRLSNGLRQLNEEELALALLSAGGVGTMGAAAELIIDTEM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1321 | 1321 | 0.0 | ||
| PANTHER | 1 | 1321 | 1321 | 0.0 | – | |
| Phobius | 1 | 74 | 74 | - | – | |
| Phobius | 75 | 94 | 20 | - | – | |
| Phobius | 95 | 694 | 600 | - | – | |
| Phobius | 695 | 712 | 18 | - | – | |
| Phobius | 713 | 1148 | 436 | - | – | |
| TMHMM | 1070 | 1089 | 20 | - | – | |
| TMHMM | 1149 | 1171 | 23 | - | – | |
| Phobius | 1149 | 1171 | 23 | - | – | |
| Phobius | 1172 | 1197 | 26 | - | – | |
| TMHMM | 1195 | 1217 | 23 | - | – | |
| Phobius | 1198 | 1217 | 20 | - | – | |
| Phobius | 1218 | 1296 | 79 | - | – | |
| Phobius | 1297 | 1318 | 22 | - | – | |
| Phobius | 1319 | 1322 | 4 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Mediator complex | A protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. The mediator complex is required for activation of transcription of most protein-coding genes, but can also act as a transcriptional corepressor. The Saccharomyces complex contains several identifiable subcomplexes: a head domain comprising Srb2, -4, and -5, Med6, -8, and -11, and Rox3 proteins; a middle domain comprising Med1, -4, and -7, Nut1 and -2, Cse2, Rgr1, Soh1, and Srb7 proteins; a tail consisting of Gal11p, Med2p, Pgd1p, and Sin4p; and a regulatory subcomplex comprising Ssn2, -3, and -8, and Srb8 proteins. Metazoan mediator complexes have similar modular structures and include homologs of yeast Srb and Med proteins. | ||
| Biological process | Regulation of phenylpropanoid metabolic process | Any process that modulates the frequency, rate or extent of phenylpropanoid metabolic process. |
Expression pattern of LotjaGi6g1v0299900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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