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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0302900 |
| Transcript ID | LotjaGi6g1v0302900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT1G25270.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q4PT23|WTR6_ARATH WAT1-related protein At1g25270; TrEMBL-Plants: tr|G7IL80|G7IL80_MEDTR WAT1-related protein; Found in the gene: LotjaGi6g1v0302900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:62033440..62041164) extracted from Lotus japonicus Gifu genome v1.2.
GAGATATATAAGTGCTTGAAAATCCTCTTTCAAAATATGATTACTTGCGCAAAAATATATATAACACTGCCTTTCCTCTA CTCTAATAATGCCTTCTTATAGTTCTAGCTTTCAGTTTCTCTATCTCTCGTTCACTATCAGTCTATCACACACACTTATC TTCTTAAGTGAAATGTAAGCCCTTTTTCAGAGTGCACTGACTAAAGATGAAGAACATTGGCAATGTGGTGCAGGGGTTGA AGCCAACGTTGGTAATGGTGGGGGTGCAGATAGCAATGGCTGGGGTGAATGTGCTGCTCAAGCTCGCTGTAAACGATGGC ATGAACTTGACGGTGGTTACTGCCTACCGATTTGTATTCGCCACTGCTTTCATAGCTCCACTTGCTCTCATCCTTGAAAG GTTCATTCCTGCTTTAATTAATAATCATTTTAATTAATTATAGATCCAACTGATATATATTGTCCATGAATTATGTTAGC AGGAAGAAGAGGACAAAGATGACTTGGATGCTGCTGTTTCAGTCATTTCTCTGTGGTTTATTTGGGTATGTAATTAATGT CATGTTCCTTTATTATATATCATTTCATTGATACCCCTTATTGATTGAATTTAGAAGCATCGATAGCTTGCATTAATTTC TTTCACGTATCCTGATATTCATTTGTGAAGTAATCAACTAAATCTTTCTTCTTTCACACTCATCTTGTTGCCACATATAT TTCTAAGTTATTTCAGTTAGCTTTTTGCTCTTAAGTTCAAGCACACAGCATCTAACCGAAATCATGTACTAGTTAGATAA AGTAATATATATCTAAGAAGTACGATCTTAGTTTAATTTTTTTTAATATTTAATTATGCACTAATAACTAATTTAGTGCA TCTCTAGATACGTTATATCTTATATATAATCATAGCATTGTATAAGATATGCCGTCTTGGAAGCAAATTGAAGAACAAAC TGTCCTCTTTGATGGAAAACTCTCTGTCTTTCAGGGGCGCGTGTCTGCTGCTTTAAAATGGTATTATCTTCATTACCCTT GTTTTTTCTTTCTTTCTTCAAAATTAAGTGTGTTGCTAAAGTTTGTAAACAGATCCAAAGTAGGTTCTTATGGGGACGGG TGAGTAGAGGTCCAAAATAGCTTGGTTTAAGTGGGATAAGGTGTATTGTTCAAAAGAAACAGGGGGCTGGAATGAGAGAC ATTTGATACAGTGTTGTTAGGATAATGCAGATGGAGGTTAGTTAGTAATTACAAGATAGATTATGGTGAGGGTATTAAAA GCTAAATATGGGGATGCTGTTGAGGGTGGTCAGGAATGAAACTTCAAAATTCAAGAGATTGTATGATATTTCCGATTAAC ATCATCATTTGGTGAGTGAGATGGGTAAATGGGTGGATGAAGCTTGGGTTTGGAAATTTAAAAGGAGAAGGCTGTTGTTT CAATGAGAGAAACAATTGTATGAAAGTTTGACGCGGGATATACAATCAATTCACTTGAAGCATGAGGTTGATGATGTGGT AGTGTTGGAATGCAAATGCAACCAGGAGTTATTCTGTAAAATCAGCATATGCTGTGATTCATGATTGAGATTTCCAAATT AACAAAGCTTCTTTCAGAAATCTATGGAAGGTGGTTGCTCCATCCAAGGTCAATGCTTTTGTTTGGCGTGTTATGTTGAA TAGGATTCAAACAAAGACTTATTTGAGAAAGTAAAATATAATAAATTCTGAATTAGAATGCTTGTGTCCATTTTGTCATA TTGAGGAAGAAACCACTAGTCATCTTCTATTCACATGTTCGCTTTCTTCAATAGTATGTAACATATGTTATAAGTGGCTG GGTTTCCATACTGTGTTAAGTTTTGATTTGATTAATTATGCAGAGGAGCATCTCAAAACTTCTACTTAGAGTCTCTGGCT TTAACTTCAGTAACGTTTGCAGCCGCCATGTCTAACCTTACACCAGCCATAACCCTTATTATTGCCGCTTCCTTCAGGTA AGTAAAGTAATTAGCCATGGCTTGTACTTTACTAACATTCTTTTTTCAACTTCTAATTCAAACTAATTCTCTTTTTTTTC CCGGATTTGTCTATCAAGTGGAAAATTAAATAGACTGCTAGTGTAATCCATGTATATATAAATGACTTTAAGAAAAGTTA TCCTTTTATTTTACATTAATGATTGCTGAACCCCTGTGACACTAAATTTTTTATGGCCATTTTAGATCGCCACCAAACGA GCCTTTATCGTTTTCTTTTTAACTTGCTAATTTTTTTTTTTGGTTACATTTTAACTTGCTAATTTATGACAATCTAAAAC TGCCATAAAATTGGGTGTCTCGACACCGATCACTGCGGTTTGTTTTAATACCTTTTTGGATCAATTTCATACTTATGTTT TACCAAACAATTTAAAGAGCACAAGGATAAATGAATGGAAGCTTCAATGATATTACTTGTTTCAAGACTATTTACCTCAT TTTCATGTTCTCATCATTCACATTCGTTCGTGTATCTTGTTCAAAAATATTCTTAATATAAAGAGAATTTTTTTCCTTAT TCAATGTGTCCTCAGATTGGAAAAAATAAATTTAGAAACTACAGCAGGGAAGGCTAAGATAGTGGGTACAATAACTGGAA TTGGTGGGGCAATGGTTCTGACTTTGGTTAAAGGCAAGGAAATCAAGATAGAGTCCTTCCACGTGAACCTTTTGCACCCC CAAAACGGTACACATCCACACGCCGGTGGTACCGGTGAGAACCTCTTGGGTGCTCTTTGCAGCCTAGCCAGTGGCACCTC TTACTCATTGTGGCTCATTATTCAGGTCAGTTTAATTTGGTTTAGCAACTAAACTTTTGTTTTATGATAAATTAGTTCCT TTATACTAGTATCATAGGGTTGTTCTTCGAATGTATCTTATTGATGTGTTATGATATTTTCTAAACTAACTTTTTTGATT TACAATCTAGTCCAATATTTTAAACAATGAATTAAAGGATACTGAACTCTATATTTTTATAAGAGTACCGGAGTAATGCT TTATTTATTAACTTTGAACTCATGTGTCTCAGAGAAAGATGACAGAAAGGTATGACGGTCATTACACAAGCACGGCGTTA ATGTCGTTTTGGGCTTCAGTGCTATCCTTTGTGTTTGCTCTTTTCATTGAGAGAGATTGGAGTCAGTGGAGGTTGGGTTG GAATATTAGACTCCTAACTGTTGCTTATGCGGTATATATGCTTTTTCTTTCTTTTCACACCTTTTATTTAAACTTTTCCG AAAATGAAGAAAACATATTGTATAAAAAAACTGCATAATTAAAATAATGTGGAAATATATATATCAATATGGATTCACTA CAAAAAAAACGTTTTTTAGTGGGGTTTTTTTCTTGCAATTAGTGGGGGTTTTCAACCCCCGCGAGTTACTTAGCGGGGGT TTTGAAAAATCCCGAAGTTACACTCGCCACAAATTATTAGCGGCGTTTTTCAGCAAACCCTGGTACCTGCATATACATTT AGCGGCGTTTTTTAGCGGGGGTTTTAAACCTCCCTTATCCGCAAGCTTTTTTTAACGGGAGTTTTCAACCCCCTTAAATG CAAGAGATTATTTACAGCTTTAAACTTGCCTTGGCTACCAAAGTTTATTCTAGGGACATTTTTAACCTAGAATAAGAGCC AATTGACACATTACAAATTGAACATCATAGAAAAAATAACAGCAGAGAGAAGGGATAAGGAATCCATAACAATGAAGATG CATGATTTTGGTGATGATGTGCGACCCTTTGTAAGGTTCCCTGTGAGCAATACCTTGAAGGTATTGCATGTCATAGAAAT CAAAGATGCAATAAGTTAAGTAGCATTACCTCTACCAATTATGGCAATTGAAGGGAGAGTCAGTAGCTAGGGTGCTTGTC CAAAAACATCAACAGACAAAGGTCTAGTACATAATAAAACCAATGTTGCAGCAACCATAAGCTGCATTCAATAGAAAATC ATTCACTTACAGAAAATAACGAAAGCACGGTTTTGACATGTCACTTATAGTATGTTTGCAAATCATTCTACTATTTATCG CAAAGCCAAAACCAGTTGTGGGAGAAGCTTATGGGTGACAGAATTGATTCTGAGGAATCGAAATATGTTATTACTTAAAG AGACTTGTATGTAAGCATCAAGTAGTCCAAAGAGTAGTAATAGATACCTTGTCAGCTACGGGATCTAAGAACGCACCAAA TGAATATTTTAACTTCATCTGCATTGCAAATATAGAAAAGACAAGTGATAAACATCTCAAACATGGAACAATGAAAAAGG AATGTCTGGTACGTATTTGAAAAACACATTGGATCTACATACCAACAATTCCAGAACAAGTTGTAACAAATTTCAGTCCA CCTGTGGACTTGTTCCCCTCATTGATACGCCTCAACAGGTCAGAACATTCACTTTCTGTATACGTGGTTGAATCTTCGCA CACATTTAACTCAGATGGATCTTGCCGATCAATCTTTAGCACTCTCCAATATGTCCTGTTCTTGTCCCTTCCTATCATGT AAAAGTTCTGTGGCACAAACATAAAAACAAAAGCACATCCAAGCACGTAATTCAGTATATCTCAAATGGGATATCAAGAG TTAAATATAAACATTGGATTAGACAGGCATTGTAATTCTAGGGCCATATTTCCAAACCAAGTATCTAAATCATAAACAGA GGCCAGAAGATAACCCCTTCCAAATTTAAGGCAAATCCCATTTCAAGGTCAAATAGAAATAGGAAGTATTCGCATAGATG CTCACATTGCCAGAGAATAAAAGTTACATTCAAATTCACTTTGGAAGTAAAGGGTATATGTATATATGCTTATTGGAGAT TATCTACTAGAAAATGCACTAAATAAGCTCCAATAAGTGCTCTTTGGTTTGCATCCAATCGGGTACGTATAAAAACATCA AATTAGTGAAAGAATGAGAGCTAAATCAGACAATGGAATTAGTTTACCAATTTATCTACTTCTGTCTACTTAGTCAACTA ATTCTCATCCTGTAAAATATTGAACCTATACATTGAGGCCTGTAACAAAAGAAATCCAATGATTACATAGTTTCCTGATT CAAACATTTAACATTGCAATTTCAAAACAAAGAAGAACCACCAATGATAATAAATTCACTGGAATACTTAATATCCACAA ACACTAGAAAGAAGAATAAAAGTGCATAGCATCATACCGATAGAGTCTCATAGATCCTAAACTTGTTCATACAGGAAGGT GTAGAAGCAGGAGGAGAAGAAGACTGAGAAGAAGCCTCATTCTCTGACGACGCCATGACTATAGCTACTCTCAGATCCCC CGAGCCACAGGCTCAGAGGGAAACCATCAAAATTGCATGCAAACAGTAGCCACCTGAATTTCCCTTCACAAGATCACCAC CTCTAACACAAGGTGGAGGAGGAGCCACAGCAACAACCACACACAGAAACGCAAACAACCAAATCAAACAACAACAACAA CTCCATGCTCTGCGAAATCCTAGGCTGCTTCAAATACATCATTCTCTTCTCCGATCACAATTATCCACCTCTCTTCCCGT TCCAGCTCCTCCACCAACCGCCGCCGCTATCGTCGCCGCCGTCCGCAGCCGCCTGAGATATTCACCACCCAAGCTTGACG CGAAGACTCGGCACAACACAGATCTTCAAATTGCGAATCGCGATTCTATGGAAATGGAGAGGAATGTGCAGAGGAAATTA TCAACGTTTGCGTAGAACCCTAAATCGCAATCTGAAAGAGAATTGAGAAGCGAGATCGAAGAGAGTGATCGAAGGGAGCT CGAAACAGAAGAAATCGGTGGAAATCGGGAGGTTGGAATCGGTGGAATCAGGTTGAAATCGGTGGAAATCAGGTTGAAAT CGGTGGAAATCGAGATCAAATTGGTGGAAATCCATGGTTGAACGAACGAGTGAGAGTTGAGAACGAGAACGAACGAGTGA GAGTGACTGAGAGTGATGGAGAACGAGAACGAGGGGGTAATTAATGAAAATTTTGCGGGGGTTATTAAAACCCCCCTTAA CTATTAAAAAGCAACGACATTTGCGGGGGTTATCAAAACCCCCGCTAAAAAACCCCCACTAAATAACGTTTTTTTTGTAG TGATTATTGATTCTATTAAGATAAAAAATGATGTGAATTGAGTGTTGTAGGGTATAGTGATCTCTGGACTGGTGGTGGTT GTAATTTCATGGTGTGTCCAGATGAGAGGCCCATTGTTTGTCGCTATTTTCAATCCTCTGGTGCTTGTGATTTTGGCCTT CGCTTGTTCTACGATATTGAATGAGAAGCTATATTGGAAGGTACATATCTCGAAACCTCTAGTTATTTTCACAATATAGA GTACAATACTTATCATATTTTGTATTGCTTCATAAATTAGTTGTTCACCTACAAAATGCAATTAATGAGTATGTAGCTCT GCAAATTTCAATCATATTTATGAAGGGAGGATTGACATCAATCCATTTAGTTTCAAGAATATTTGTTAATTAATTTCAGC ATCATTGGAGCAGTGTTGATTGTATGTGGCTTATATGCGGTTATATGGGGTAAGAGCAAAGAGATGAAGATGAATACAGT ATTGGTATCTTCAAATGAATCAGATAGAGTCGAGATAGTCTTGAGATCTACAGGATCAGAAGAGAACAGCAACAGCAATG GTATCCAAGTGATTAGGGATGATGAAGATTCATCAGCAGAGGACATGAAGAGCAAAGTGCATATGTTCACAATCAAGGAA AAGAATTAAGTTCTACCTAGTAATGCCTGAATATTCAACTCTCTAACTTGCCGATAGAGATAGATAGTACAGTGGAAAAC TATGCATCCTTTTCAAACAGAAAATGTTAGTAGACACCCATATTAGGAAGAGATGGAAAGAAAAATGAGATATAGGTGAT AATGTGAAATATCATGTAATAATAGGAGTTAGAGAGAAAAATATACGTGTGGTTTTTAATTGTCTCTAACAAATGAGTTT GTGTTGAAGCCGGCCCCAACATGCTACTGGCGGGCTTTTAAATTTTAACGGTTTCCAACTTTCAGGCTTTGTTTGGTTTA TGAGAGAAAGAGAGATGAGTAGAGGGAAAGAGGTAAGAAATGTAGTGGATTTGTGGATTATTCGTTTGATACTAAGAGAA GAAAGAGAGGAGAGCAAAAGTAAGTTTTGTTTTTATAAATAAAGATGTATCCAGTTTGGAAGATTTTGTGGCGGCTATAA ACAAATTCTGGAGATGTTGAACCGCCAATAATGAGTAAAACAAAACCGATTTGGGGAGACCGTAAAAGGTAGAGGACTCA ACACTGTGGCTCCCCCTCCCTCCCTTCCACTAAATAAGGGTGAGCACCCCCTATCCCAATATTTTTCTCTCCCCTATTTC AACCGTGGTTTTTTCTTTCAATCTTTCTTGCTCTTCTTAGGAGAGTTTGCTCTCAAGATTTTTCATATAATTTCCCTTGC AATTGAAGAACAAACAAAGTATAATCCAACTATAATTAATTTTTTTACATTGGAAATATAAATTGCACTCACTAATGATG ATCTTAGACTTTCCTCTCCCTAACTCATTTGTCCCCCCCCCAACTTTTATCGCTTGAACTATTATTCGAGGACTAACGGT AATTAATCTGAAGTTGGATGTCAAAGCATCTCAGACAAACTAAAT
CDS sequence (LotjaGi6g1v0302900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAACATTGGCAATGTGGTGCAGGGGTTGAAGCCAACGTTGGTAATGGTGGGGGTGCAGATAGCAATGGCTGGGGT GAATGTGCTGCTCAAGCTCGCTGTAAACGATGGCATGAACTTGACGGTGGTTACTGCCTACCGATTTGTATTCGCCACTG CTTTCATAGCTCCACTTGCTCTCATCCTTGAAAGGAAGAAGAGGACAAAGATGACTTGGATGCTGCTGTTTCAGTCATTT CTCTGTGGTTTATTTGGAGGAGCATCTCAAAACTTCTACTTAGAGTCTCTGGCTTTAACTTCAGTAACGTTTGCAGCCGC CATGTCTAACCTTACACCAGCCATAACCCTTATTATTGCCGCTTCCTTCAGATTGGAAAAAATAAATTTAGAAACTACAG CAGGGAAGGCTAAGATAGTGGGTACAATAACTGGAATTGGTGGGGCAATGGTTCTGACTTTGGTTAAAGGCAAGGAAATC AAGATAGAGTCCTTCCACGTGAACCTTTTGCACCCCCAAAACGGTACACATCCACACGCCGGTGGTACCGGTGAGAACCT CTTGGGTGCTCTTTGCAGCCTAGCCAGTGGCACCTCTTACTCATTGTGGCTCATTATTCAGAGAAAGATGACAGAAAGGT ATGACGGTCATTACACAAGCACGGCGTTAATGTCGTTTTGGGCTTCAGTGCTATCCTTTGTGTTTGCTCTTTTCATTGAG AGAGATTGGAGTCAGTGGAGGTTGGGTTGGAATATTAGACTCCTAACTGTTGCTTATGCGGGTATAGTGATCTCTGGACT GGTGGTGGTTGTAATTTCATGGTGTGTCCAGATGAGAGGCCCATTGTTTGTCGCTATTTTCAATCCTCTGGTGCTTGTGA TTTTGGCCTTCGCTTGTTCTACGATATTGAATGAGAAGCTATATTGGAAGCATCATTGGAGCAGTGTTGATTGTATGTGG CTTATATGCGGTTATATGGGGTAA
Protein sequence (LotjaGi6g1v0302900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNIGNVVQGLKPTLVMVGVQIAMAGVNVLLKLAVNDGMNLTVVTAYRFVFATAFIAPLALILERKKRTKMTWMLLFQSF LCGLFGGASQNFYLESLALTSVTFAAAMSNLTPAITLIIAASFRLEKINLETTAGKAKIVGTITGIGGAMVLTLVKGKEI KIESFHVNLLHPQNGTHPHAGGTGENLLGALCSLASGTSYSLWLIIQRKMTERYDGHYTSTALMSFWASVLSFVFALFIE RDWSQWRLGWNIRLLTVAYAGIVISGLVVVVISWCVQMRGPLFVAIFNPLVLVILAFACSTILNEKLYWKHHWSSVDCMW LICGYMG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 14 | 14 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| PANTHER | 9 | 324 | 316 | 4.2E-157 | ||
| PANTHER | 9 | 324 | 316 | 4.2E-157 | – | |
| Pfam | 14 | 150 | 137 | 6.4E-12 | ||
| Phobius | 15 | 35 | 21 | - | – | |
| Phobius | 36 | 40 | 5 | - | – | |
| Phobius | 41 | 63 | 23 | - | – | |
| TMHMM | 44 | 63 | 20 | - | – | |
| SUPERFAMILY | 47 | 154 | 108 | 2.22E-9 | – | |
| Phobius | 64 | 74 | 11 | - | – | |
| Phobius | 75 | 93 | 19 | - | – | |
| TMHMM | 75 | 94 | 20 | - | – | |
| Phobius | 94 | 98 | 5 | - | – | |
| Phobius | 99 | 125 | 27 | - | – | |
| TMHMM | 104 | 123 | 20 | - | – | |
| Phobius | 126 | 136 | 11 | - | – | |
| Phobius | 137 | 155 | 19 | - | – | |
| Phobius | 156 | 186 | 31 | - | – | |
| Phobius | 187 | 206 | 20 | - | – | |
| Pfam | 188 | 311 | 124 | 2.2E-7 | ||
| Phobius | 207 | 217 | 11 | - | – | |
| TMHMM | 217 | 239 | 23 | - | – | |
| Phobius | 218 | 239 | 22 | - | – | |
| Phobius | 240 | 250 | 11 | - | – | |
| Phobius | 251 | 275 | 25 | - | – | |
| TMHMM | 254 | 276 | 23 | - | – | |
| Phobius | 276 | 281 | 6 | - | – | |
| TMHMM | 281 | 303 | 23 | - | – | |
| Phobius | 282 | 303 | 22 | - | – | |
| Phobius | 304 | 327 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0302900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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