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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0319000 |
| Transcript ID | LotjaGi6g1v0319000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycerol-3-phosphate acyltransferase 3; TAIR: AT5G60620.1 glycerol-3-phosphate acyltransferase 9; Swiss-Prot: sp|Q53EU6|GPAT3_HUMAN Glycerol-3-phosphate acyltransferase 3; TrEMBL-Plants: tr|A0A1J7GPL3|A0A1J7GPL3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0319000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63598159..63601800) extracted from Lotus japonicus Gifu genome v1.2.
ATGAATAGCTCTGGGACACTCAAGTCTTCAAGTTCTGAGTTGGATCTTGATCGACCCAACATTGAAGATTACCTCCCATC AGGAGCCCTTATTCAACAAGAACCTCATGGCAAGCTTCGCCTGTATGCCTTCTCTTTTCCATATTCTGCTTGTGCTGTTA TTTGGATTTGCACGTACACTGGGAATTCAATAAGAAGCAGTATTTTCTTCTCTTGATATTTTTGGAGAATGGAGTTTTAG TTGTCATTTAACATTCATAGTTTTCTCCTTTCTTGTGGAATGTTTTTTCAGGTTTGATTTGCTAGACATTTCTCCTACTT TATCTGAGGCGGCGGGTGCTATTGTAGATGTAAGCTTTGTCCCTCATATTTCGTTCACTGTTTTATATCAGTGATTTTCT TTTTGAGAACCAATTACGATGAAATTGTTATAAAACTGTACAGTGTCTTGCTTCCACAAATATCTTCATCTCAAATTTTA TGTTTCCTTCTCATCTTTCTTTAGGGTATTCTTGATAATCAGCAAACTTATATTTTAAAGCTCAATGTCAGCGAATGTGT GTGTGTGTAATATATGTGTCTATACGGAATCTTAAAGTTATTGTCTTATTTTGTTATATCTAAGACCTTTTTCTGCTCTC CGGTTAGACGTTGGTGGTTTGCTCACCTGTTCTGAACTTTTTATGTTGGACAGGACACATTCACGAGATGCTTCAAGTCA AATCCTCCTGAGCCATGGAATTGGAATATTTATTTGTTTCCTTTGTGGTGTTTTGGAGTTGTGGTTCGATATTTGATTTT GTTCCCTTCAAGGTCAGCTTCTTTCTAAAGCCAGGCATCATATAGTAACCACAAATCTAGCTATTATAGGATCTAGATAG CTGATTTTAGATGCCTTTGCTCTTTTGTAATTAAGCAATGAGATTGACATTATGTTATGAATTATAAATTTATAACTTTT AGGATATGATTTGAACTTCAATTTTCACTATCTAATTCACCTTTCGTATTTGGCCTATTTGTCTCTCTTTGCTTCTTTTC ATGTTAATGATTCCTTTTCTGTCATTTTCTCTGGCAAAGTGATGCCATCCTAATTGACTCTGCAGGGTTCTAGTGTTAAC AATAGGATGGATAATATTTCTTTCATCCTTCATTCCAGTGCACTTCCTATTGAAAGGACATGACAAGTTGAGGAGAAGCA TTGAGGTGCATATTCAACTTATTTTGGCTTTATTTCACCTTTTCTTATTTAAATACTCTGTCTGTACTCTTACACACTAC TAAAACTACAGTAAATGACCATTCTAAGAGCTTGAAATGTAAATGACCCTTTCGAATTTTAATTTTTTTTTATTCAGTTT AGTCTTTAACATGCACTCTCTTTGCATTGACCTTCAGTTCATCAAATTAATTGTATTTAAATTGGTTGTTTCCTTCAGAG GACTTTGGTAGAGATGATATGCAGTTTCTTTGTTGCCTCTTGGACTGGAGTTGTCAAGTACCATGGGCCAAGGCCTAGCA GGCGACCGAAACAGGTTTGTCTAACATTTACTGATTTTGTCATTTTATCCTTCTTTACGTATTCAAGCTGGAGTAAAAGT TACTTCTTACTAATAGGAGCTTTCCCTTCATTTGTTTAATAGGTTTTTGTGGCCAACCATACTTCCATGATTGATTTCAT TGTCTTAGAACAGATGACTGCATTTGCTGTTATTATGCAGAAGCACCCAGGATGGGTTGGTAAGCATATAGAGCTATCTT GTGTAGAACATATTACACAAAACTTATTCCTTCATATTGGATAAGAAGCTTTATGTTTTAAGCATTGGTATATAATTACA CTCATGTTCTAACCACTAAGCGAATATGATAAGAACTGGCATGTATATAATTGATAGCTCTTTAGTTCATCAAATTAATT GTGTATGTTGGTGTGTATATAATTACACTCATGTTCTAGCTACTAATTGGTAGAAGAATTGAATGAAAGAAGAATTTTTG AGAAAAGTCTCTTATTCTCCAGAATTGGAAAACAGAGGAAAAGAAAGTATTACCTCCTGGATTTTCGAGAGACCCAGTTC TCTCCACTACTTCCCAGTATCCCACTAATTTCCTACCTTTTCCCATTTTTCCTTTCCTATTTATAGCATCAGGGTAGTTA TTTCCATGCTAATAGTAATCCTAACTAACTATGACAGCTAGGATAGTATTTTGTTACAATTAACAAGTTACTACTAACAA GTAACAACTAACTCTCCTATTCAGATTTAGGATGCAGGGTTATTTTCCCCTGCATTGCTCTCATAGACCCTTGTAATATG GGGTAGAATCTTATCATAATGTGACTAGTTCACCCAATATATGTGGTGGTGTGCTTTGGGGGGGGGGGGGGGGTCAGGTT CACACCATTTTGTTCTTAGGCATTATATCCCTTGCTGTCAGGGATGATTTAGAGAAACTTATAGCTTGGTATTGTTGAAT TATTATCATAATTTATCTTGACAAAAAATGATTTGTTAAGTTTATTAAAAAATTTAGCTCCTCTGCAGGATTATTGCAGA GTACCATTTTGGAGAGTGTAGGATGTATCTGGTTCAATCGTACAGAGGCAAAGGATCGAGAAATTGTGGCAAGGAAGTTA GTATAAATATAGTCAGTAGAAAATATATTTTCGTGTCTAATTACTATTTTTATTATATGATTTTTCATGTTTCAGGTTGC GGGATCATGTCCAGGGAGCTGACAACAACCCTCTTCTCATATTTCCTGAAGGAACTTGCGTGAATAATCACTATACAGTC ATGTTCAAGAAGGTATGGGAATCATTTGCAATTGCAGTCAATGTAAAATGAGTTATGTCCTGCTATCATATTTTTGCATT ACATTTTTTTATTCTTTTACGTGGTATGTTTTCTTTTCCTCTTCCTATACTCAGGAAACTTCTATTGAAACCTAATTTTT AATGGTGTTTAGGGTGCATTTGAACTTGGCTGCACAGTTTGCCCAGTTGCAATCAAGTACAACAAAATATTTGTAGATGC TTTTTGGAATAGTCGAAAGTAAGACGTTTCTAATGTTAAATTATTTCTACTAAGCTCACTGTTCAATGCTTATGATAGAG ATTCTAAGTTTCATGCATTTGCAGGCAATCATTCACTACGCATCTGTTGCAGCTAATGACATCTTGGGCTGTTGTTTGTG ATGTTTGGTACTTGGAGCCACAAAATCTGAAGCCCGGAGAGACAGCCATCGAGTTTGCAGAGAGGTACATAATCTGATCC TGATTGTTTGCGCTTGTTTGGCTTTCACTAGATGTTGAAATTGTGTCAATTTTATTGTAATTATGCAGGGTGAGAGACAT AATCGCACATCGTGCTGGCCTAAAAATGGTTCCTTGGGATGGATACCTGAAGTATTCTCGTCCTAGCCCAAAGCATAGAG AAAGAAAGTAAGCTTAATTTCCTAGTTTCTTGGTATCCACTATGCTGTCATATTCTACATGACCTATGACATAGGTGTAT CATTTGGATTATCAATTTTTTATATTCTTATGTCTCTGGTATTTAATCTTTGGTGGTTATCATGTATTTGCAGGCAGCAG AACTTTGCCGAGCTAGTGCTGCGACGCTTGGAGGAGAAATGA
CDS sequence (LotjaGi6g1v0319000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATAGCTCTGGGACACTCAAGTCTTCAAGTTCTGAGTTGGATCTTGATCGACCCAACATTGAAGATTACCTCCCATC AGGAGCCCTTATTCAACAAGAACCTCATGGCAAGCTTCGCCTGTTTGATTTGCTAGACATTTCTCCTACTTTATCTGAGG CGGCGGGTGCTATTGTAGATGACACATTCACGAGATGCTTCAAGTCAAATCCTCCTGAGCCATGGAATTGGAATATTTAT TTGTTTCCTTTGTGGTGTTTTGGAGTTGTGGTTCGATATTTGATTTTGTTCCCTTCAAGGGTTCTAGTGTTAACAATAGG ATGGATAATATTTCTTTCATCCTTCATTCCAGTGCACTTCCTATTGAAAGGACATGACAAGTTGAGGAGAAGCATTGAGA GGACTTTGGTAGAGATGATATGCAGTTTCTTTGTTGCCTCTTGGACTGGAGTTGTCAAGTACCATGGGCCAAGGCCTAGC AGGCGACCGAAACAGGTTTTTGTGGCCAACCATACTTCCATGATTGATTTCATTGTCTTAGAACAGATGACTGCATTTGC TGTTATTATGCAGAAGCACCCAGGATGGGTTGGATTATTGCAGAGTACCATTTTGGAGAGTGTAGGATGTATCTGGTTCA ATCGTACAGAGGCAAAGGATCGAGAAATTGTGGCAAGGAAGTTGCGGGATCATGTCCAGGGAGCTGACAACAACCCTCTT CTCATATTTCCTGAAGGAACTTGCGTGAATAATCACTATACAGTCATGTTCAAGAAGGGTGCATTTGAACTTGGCTGCAC AGTTTGCCCAGTTGCAATCAAGTACAACAAAATATTTGTAGATGCTTTTTGGAATAGTCGAAAGCAATCATTCACTACGC ATCTGTTGCAGCTAATGACATCTTGGGCTGTTGTTTGTGATGTTTGGTACTTGGAGCCACAAAATCTGAAGCCCGGAGAG ACAGCCATCGAGTTTGCAGAGAGGGTGAGAGACATAATCGCACATCGTGCTGGCCTAAAAATGGTTCCTTGGGATGGATA CCTGAAGTATTCTCGTCCTAGCCCAAAGCATAGAGAAAGAAAGCAGCAGAACTTTGCCGAGCTAGTGCTGCGACGCTTGG AGGAGAAATGA
Protein sequence (LotjaGi6g1v0319000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNSSGTLKSSSSELDLDRPNIEDYLPSGALIQQEPHGKLRLFDLLDISPTLSEAAGAIVDDTFTRCFKSNPPEPWNWNIY LFPLWCFGVVVRYLILFPSRVLVLTIGWIIFLSSFIPVHFLLKGHDKLRRSIERTLVEMICSFFVASWTGVVKYHGPRPS RRPKQVFVANHTSMIDFIVLEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRTEAKDREIVARKLRDHVQGADNNPL LIFPEGTCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIFVDAFWNSRKQSFTTHLLQLMTSWAVVCDVWYLEPQNLKPGE TAIEFAERVRDIIAHRAGLKMVPWDGYLKYSRPSPKHRERKQQNFAELVLRRLEEK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 76 | 76 | - | – | |
| PANTHER | 33 | 369 | 337 | 1.0E-170 | – | |
| PANTHER | 33 | 369 | 337 | 1.0E-170 | – | |
| TMHMM | 74 | 96 | 23 | - | – | |
| Phobius | 77 | 95 | 19 | - | – | |
| Phobius | 96 | 100 | 5 | - | – | |
| SUPERFAMILY | 96 | 335 | 240 | 1.83E-10 | – | |
| TMHMM | 100 | 122 | 23 | - | – | |
| Phobius | 101 | 122 | 22 | - | – | |
| Phobius | 123 | 133 | 11 | - | – | |
| Phobius | 134 | 154 | 21 | - | – | |
| TMHMM | 135 | 152 | 18 | - | – | |
| CDD | 140 | 350 | 211 | 1.81322E-98 | – | |
| Pfam | 152 | 273 | 122 | 9.1E-19 | ||
| Phobius | 155 | 376 | 222 | - | – | |
| SMART | 165 | 276 | 112 | 2.6E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transferase activity, transferring acyl groups | Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi6g1v0319000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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