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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0321300 |
| Transcript ID | LotjaGi6g1v0321300.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT4G18710.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q39011|KSG7_ARATH Shaggy-related protein kinase eta; TrEMBL-Plants: tr|I3T330|I3T330_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0321300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63769491..63772224) extracted from Lotus japonicus Gifu genome v1.2.
TATTGCAATTCTTAACAGGAGATGTCTACTTCTGTTATCAATGGGAATGATTCCCTAACTGGTCACATCATATCTACAAC AATTGGAGGCAAAAATGGGGAGCCCAAACAGGTATGTTTTGAATTATTTGCCTAGTTGTTCAAAATTCTATTTGATATTT ATCCTGGGTAGCAAGTTTGATTTCTTGTACAATGATTCTTGTAGACTATTAGTTACATGGCAGAACGGGTTGTGGGAACT GGATCATTTGGAATTGTTTTCCAGGTATGCTAATACTAGATTCATAGTTGTTGCTGTCTCCGCCAATTTTGCGACATGCT GATTGTTTATCCTCTCAGGCAAAATGCTTGGAATCTGGAGAGGCGGTCGCCATTAAGAAGGTTTTACAAGACCGAAGATA TAAGAATCGTGAACTGCAGCTGATGCGTGTGATGGATCATCCAAATGTTGTCTCTCTGAAGCATTGTTTCTTTTCCACTA CAAGTACAGATGAACTTTTTCTGAATTTAGTGATGGAATATGTTCCAGAATCCATGTATAGGGTCATCAAGCACTACAGT AATGCTAATCAAAGAATGCCTATCATCTATGTGAAGCTTTATATGTACCAGGTATGCCTCACTTTCTGGTGATTCAAAAA CTTCTGATTTATCTTCTCACTCCCTGATAATATTTCTTGGTGGGCATACAGATTTTCAGGGGATTGGCGTATATCCACAC TGTTCCTGGAGTTTGCCACAGAGATTTGAAGCCTCAAAATATATTGGTTCGTTTATATATTCTTGCTGAAAGCAGTACTT ATACATTATAAGTCAAAATTCTTGTTAAAAGTAGTACTTATTTCTGGATCTGATTTCATTCTGTGCATTCTCCAGGTTGA TCCTCTTACACACCAAGTTAAGCTATGTGATTTTGGAAGTGCAAAAATGCTAGTACGTTGACCTCCTCATTTTACTTTAA CATGCTTAGTTTTTTCCTGTTTTGTGCTTAACAATGTTTTTAATATTAGCTACATAGTAACTTATCTAGAATGTCAACCA ATAATCTACCAATTTCCTCAACGTTTGACAGTGTGGACGAAGAGGGTACAGTTATTATGCTGTGTTTGATAGTAGTTTCA TATGCTAGTATCTTGCTCTGCTCAGCTGCAAGCTGTGGATCTGTCTTTTTATTTTTTCTTTTCTTGTGTGTGTATTTTTG CTAAATTGAGTATTTTGAGATGGTTTTGACCTTTTTGTGGAAACCAGTGTATATTGGTTCTTTCTGAGGGTTGTCATGTT CCGCATGCATCTAAATGACTAACTTGTAGCAAAGACTCTTACAGTTTCCATGATCATGGTTCCCCTAATAAATTGATTTC TCTTTTTCCCCAATGGAATGTTTCTTGTAGTAACCTTGGATTTTGTCTGTTCAGGTTAAGGGTGAAGCTAACATATCATA CATATGTTCACGTTTCTATCGAGCTCCAGAACTTATATTTGGTGCCACCGAGTATTCTACTTCAATTGATATTTGGTCTG CTGGCTGTGTCCTTGCTGAGCTGCTTTTGGGCCAGGTTTGTGTCATTGTTTTAGTTTCATCATCATGATCATTTACTGCA AAATGATGCAAGTATTCTTTCAATTATTTGCCACAAACATGTCGTCTGACATAATTTAAGCATTTGAACTTTGCAGCCAT TATTCCCTGGAGAAAATGCAGTGGACCAGCTCGTGCATATTATAAAGGTGTGATTGGTGTCAGCATTTATCAAATGTTTC TAGATCATGCTTGTAACAAAGTCAGTCATCTATAAATTTGTGTATTTCAGGTCCTTGGAACACCCACTCGGGAGGAAGTA CGCTGTATGAATCCTAATTACAATGACTTCAGGTTTCCACAAATTAAAGCACACCCATGGCACAAGGTCTGCAATTTTTA TCTCATTTACTGTAGGTTTTTTCAGATGATGAAGATTTTGTAGACTTTCTAACACTTCAAAATTGTATAGATCTTTCACA AAAAGATGCCTCCAGAAGCTATTGATCTTGCTTCCCGGCTTTTGCAATACTCTCCAAGTCTTCGGTGTACTGCGGTGAGT GTGGTTAGCTGGTCTCTCTTTTTCTATCTAAAAACCAGCATAGCAATGTAATAATAACTTTTTTTTTGTTATGCAGCTTG AAGCATGTGCACATCCTTTCTTTGATGAACTCCGAGAACCCAATGCTCGTCTGCCAAATGGTCGTCCACTTCCCCCTCTA TTCAACTTCAAACAAGAAGTAAGTACTTAAAACATCTTTGGTGGATAAACTTGGGCTCTAGCGGTAATCTATGTGTGACA AAATTGATACTAAGTACTCACTATTTGGCAAAAGATTGACAAAATTAGAAGTTTGAAAACATTCCATATATACTCATTCC ATTTTCTAAGCTTTAGATTTGTCTGGTAGTCTGAATTTCCACTAGCAAGTGATTCTTTCTTTTGACCCGTGTATTCACAA GATACACTCTGGTTTTGTATGTATTTTTTCTTTTGTGTGTCTATTTCATTGAGTCGTATGCTCACAAAGCAATGCACTAT GTTATCATTTCCTGATCCGATTAACATCCTAGTTAAACAAAAATGATGGGCAACTATATTGTGACTTTACCTTGACAGAT ATCCGGAGCATCTCCAGAGCTTGTTAACAAATTGATACCTGACCATGTGAAGCGGCAAATAGGACTACAATTTGTTCATG TGCCAGCATCTTAA
CDS sequence (LotjaGi6g1v0321300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCCTAATTACAATGACTTCAGGTTTCCACAAATTAAAGCACACCCATGGCACAAGATCTTTCACAAAAAGATGCC TCCAGAAGCTATTGATCTTGCTTCCCGGCTTTTGCAATACTCTCCAAGTCTTCGGTGTACTGCGCTTGAAGCATGTGCAC ATCCTTTCTTTGATGAACTCCGAGAACCCAATGCTCGTCTGCCAAATGGTCGTCCACTTCCCCCTCTATTCAACTTCAAA CAAGAAATATCCGGAGCATCTCCAGAGCTTGTTAACAAATTGATACCTGACCATGTGAAGCGGCAAATAGGACTACAATT TGTTCATGTGCCAGCATCTTAA
Protein sequence (LotjaGi6g1v0321300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNPNYNDFRFPQIKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFK QEISGASPELVNKLIPDHVKRQIGLQFVHVPAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 100 | 100 | 1.3E-18 | – | |
| PANTHER | 1 | 110 | 110 | 1.0E-70 | – | |
| PANTHER | 1 | 110 | 110 | 1.0E-70 | – | |
| SUPERFAMILY | 5 | 83 | 79 | 3.01E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0321300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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