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LotjaGi6g1v0327700.1

Overview

Field Value
Gene ID LotjaGi6g1v0327700
Transcript ID LotjaGi6g1v0327700.1
Lotus japonicus genome version Gifu v1.2
Description NAC domain-containing protein; TAIR: AT4G28500.1 NAC domain containing protein 73; Swiss-Prot: sp|O49459|NAC73_ARATH NAC domain-containing protein 73; TrEMBL-Plants: tr|A0A151SAN6|A0A151SAN6_CAJCA NAC domain-containing protein 8; Found in the gene: LotjaGi6g1v0327700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:64265613..64271072) extracted from Lotus japonicus Gifu genome v1.2.

TTCCTATGTAATAAGAGCTTAGGAATCTAAAACAATTAAGATGCCTCATGTAGTTAAGATCATCAAAAGCATTGTGATGT GTATAAAGCTGTCAAATATGCCAATGGTTTAACTCCATTAAGTAACTGCATATATACAAATAGAATCTCATCATGGGTCA CTGTCCCTAACCAATTCAATTTTTATCACTAAAAAGTCTTTAATATAAACTTCTAGAAGACTGAAAACAGAAAATTTGCT TGCTGAATTTACAATGATAACAATCGGAAATTCAGATTATAAGTTGCCTCAAGCATTCATTTCCAGTGAGCAGGCAGTGA AATCTGGGTTGTTATCTACCTGCATAAATATGACTTCCAATCAAATACAAAGTATTCTAAGAGTTTGTAGACAAGAATTA CAGGGGTGGTTTAACAATCCTCAAGTAAAACAACTAGAAAATAAACTATAAACATCATCGAGTAGCCAAGTAGGTAAGAA TCAAGACTGGTCCTGCCCAATATCTTTTATGATCAGATTTTAATCTATCTATCTATATAATTAGGCAAGACTTAAGAGAA CACTATTATAATACAAAAGTTATTTTACAGAGGAAGAGCTTGGAAACAGCAAACAAACTGAAGCACAATGATGAGTACCA AAGGCCATTAGGCAGTAAACTATATCATTCAACTCACAGCAAGCCATATAACTAAAAAACCCACTACAAGGTTCTTCATA AATCAAATTATATGCACGATATGATATGTAATATCTTACAAGAACACAGATGTAAGGATAATGCTATTATGCCAATGCTA ACACTAGAATTGATTCTGTAGAATAATAGACTACAAAATCAGCTGGTTTATGCAGGAGGTACAGATTTATTACCATTTAG TATACACTTTTTATTTGATGGCTAGGTTCCCAGAGAGCTTGATTAAGGATCTTCATGGACTAATACTAGTTGGAAACTTA GTTAATAGAAGAATTTCAAATTAATTTTTGTGGTAAGGATTCTTCAGATAGAATGGTTGTTACTTGTAAGGATTCCAGGC TGTTCCCCCACCCATCTTCACTACTTTTAGCAGCTTCTCGATCAAACCATCGGAATAACAGACAATTAAATGCAAATTCA TAATACATTGGCGGTACAGGTCTTGCTACCTCTTGTTTTCAACTTCAAATTGAAATCCTTCAACTAGTCAAAAGAAGCAT CTCTTAAAGAATATGGAAAGGAAAATAAGAGGAAGGTAAAAAATGCAATCCATAGTTGATATATTACCATTTACATATAA ATATGGATTAATGGTCAAATTAGTCTATGTGTTTGTCATCTCATTTCATTTTCGTCCCTAGTTGGAAAAAATTGCCGACA TACCTCTCTGTTTGCACTAAGTTTAGTTTCGGTCCTCACCCCTCTAACGATCATGTCCAATGACATACAAACGTGACATG TTGATATCTACGTCATTTAATTAATTTTTAATTTCTAGATATATAATTAGTAAATAAAATAAAATTTATAATTAACAAAT TAAAATTAAAAAATTATTAATCACTAAATAAATCACCTAATAACTAATCACTCGTAGCCTTAATGGACAAGCTTGAAAAA CTAGAGATTCACAATTATTCATTCTATTGACTTTTAAGTACATTACTCCATAGGTTTTTATTTATAAACCAAAAGCAATT TTATTCATAGCGTAAAAACAATACTCTTAATATTTTTTTTTCTTTTGATCCGCGAATATTCTCCTCTCCAATTCATGTCT TCAACTCGACCCACTTACCTATCCTTTGGGGTCACTGTACTCTAATTCTAACCCTTAAATAATATACTTGCCAAGCGAAA TTTCTAGATAAATAATTAAAAACTTGAAGGAAAAAAAGAAGATAAATATTCTCCTTTCTTAAAAAAAAAGCAGAAACTTA ATGCCCAAGCTTCGCATGCGTGGCTTCTTTGAGAAGCTCACAAAGACGTGTCGGCGATTGTTGAAATTTAAAACAGGACT GTGATCGCATGTGTTCTGTCTATTGTGGCTTACTTTGACCCCAATATCCAGACCAGTAATCTCATTCCAAATCATCTAAA CCTCAATGTTAAATGACAAAAACGTCCCTCAAACATGACCTGTAACTTGTTGATCCGAACAACCCCGAAAAGTCGAAGTC TTTGGCTGCAAGTGTCGTGTACCATAACATGATCTCTCTTTTTTAATGGCAAAATACGATATATGTTCTACACGTTGAAG AAGTATTATAATCCACTTAATTAGAAATAAAAAAAATTTGGACACTAAATGAGAAGATGTAGTGTGTAATAAGGGTACCA TTTAAGTTCGATCAATTATTTTAAATTTAAGAAAAAATCGTGCTAGCTAGCTAGGCCACATTTATTCCTTGTTTACAAGC GTATATAGATGAGCATAGCCAAACGTGCCCTGCAAGTAACCTTTTCCTATATGTTGAGTTGAGCCTTTCATATGTTTCTT TTATCGGCTATAATAACCCTTAATTTGTCCTCTATCGATCTCTTCTTTTCTTCGTGAGCAAGAACCAGCAGTTTGGGATA TCAGGAAATATTCAATCATTGAATCAGAAGAAGGAAAAGTAAGAAATTGCTATGGTAGAATATGAAATTCTCTCCCTTTC AGCACAACAAGTATAACTAAAATGATCCAGGATATAAAAGTGTCCCAAAAAGGCACTAGCTTTACCTTTCTTCACCCTTT CTCATCTCTATTTTGCTGATTACTATTTGTTTTTATTACTAGAAAGCTGATATTGTAGGAGGGAGTAGAAGCGAAAAGGG TTCTGAAAATTTGTGGTATATATCATTAGAAGTTAACAAAGAAAGATGAAATGGTGCAATGACTCTGATAAGGAGAAGGG CAATGAATATTTAATCACGCCCACGAATACTCCTAAAGCTATCATCAATCTCACAGAAGGAATTCATACAATAAAATGCC CCTCATGTAGCCATAACATGGAAGTCAGAGATCAGGTACTAATTAATTTAAGGTTTTTTGATTCTCACATAACATATAGG AATTCCTTCTCTTGTGTTTATGCTTAATTTTAGTTCATAACAAGTTGATTTTGTTCATGCACCAATTTAATAGGGTGGAA TTCATGGATTGCCGGCTGGAGTGAAGTTTGATCCAAATGACCAAGAAATACTGGAGCATTTGGAGGCCAAGGTAGTTTCT GATGTGTGCAAGCTTCATCCCCTTATTGATCAGTTCATACCAACGCTTCAAGGCGATAATGGAATCTGCTATACACACCC AGAAAAGCTACCAGGTGTTGATTTTTTTTTCCCTTACTTAAAATAGTTTAGTTGAGACATTGCATATGCATGTTCTAGCC ATCGTTGAAATTATCATTTATTGGGAGGCACATCTTGATATATATGCGCGCGGCACCACATGTGTGAAATTAATTGTTTT AGAAATGAAAATGTTTTTTTCTTTCAAAAGGTTCAAAGTATAAGGCGGTTTAGAATCACATCAGAACATTTATGCTCTCT AAATGGGTTGGCAATGACTGCCAAACTCAAAAAAGAAGGTTGCTCAAAAAAGAAGGTTGCTACCTTGTCATTCTTTTGAT GGGGGCTTTCTCAACCTCTTACCGGATATAAAGATACAAATAAGAGTTCCTAATTCATAGTTAAGAATTCCTGATTCATA GTTATTATAACTATACCTACTCAAGTCCACTAAGCTAAATGCTTAGAACTTGAAGAGTTGTGAACCTCTCGGGTCCCAAA TACCTAAATCCGGCCATAGGTAGCACGACAAAAAGGACAGCTTAGAGAAGTAACGGGGTGGACACGGAAGATCTTAGCTA GAATCATAACGCACGCTTATATGCTATTAACTTACCCAGGAATAGTTCTAATTAAATATCAATATCACACTAAAGACCCC ATAATTGAGACTCATAAGTGTTACTTAAGAATTCAAATGCCAGCCACAAGGAACTTTTAAGAGGGAGTTTACCTCATTTG GAAGAGGCATCTTCACTTGCATACGAATTTTGGGACCTAGGCCTCATTCCTAATGTTTGGTCTAATTCCCCAAGTTTTGT AAATGTTGCCTTTGGGATATTCACTCAGTCACAGTTGATTTTGCTTCCTTTTGACACTAATATGAGATTTTCTCTCTTTT TCTTCATATAATTTAGTCATGCATAAATTCACACTAACAAAACCAGTTCCTTTACGTAATGCAACTATATATGAGAAATT GTTCCTTTGAAATAATGCAGGAGTTAGCAAAGATGGGCAGGTCCGCCACTTCTTTCACAGGCCTTCTAAAGCATACACAA CAGGAACAAGGAAAAGAAGAAAGGTTCACACTGATGATGAAGGAAGCGAAACTAGATGGCACAAAACAGGGAAAACTAGA GCTGTTTTTGCTGGTGGTGGTGCAGTGAAGGGTTTTAAAAAGATTATGGTACTCTACACCAACTTTGGCAGGCAAAGGAA GCCTGAGAAGACCAATTGGGTGATGCATCAATACCATCTTGGCAGTAATGAAGAAGAGCAAGATGGAGAATTAGTTGTTT CAAAGGTCTTCTACCAGACACAACCTAGACAATGTGGTACTTCCATTATAAGAGATCCTCCATAGTGAAAGCTCCCCACA ACCTATTCCAGACTTGGGGATGTCCAAGGTGATGGTTCTTTTTATTGGACTAGCGACAGAAGCAAGCAAAGCAAGAGTGG AGAGAAAGTAACACTGGAAGAGCTTAACAATGATATATATAGGCCATGACTTTGTATTTTAGTCTAAACCATTGATGATT AGATCTAACGGTCGTGAGTTATTCTTAGGTTCTCGTACAAAAACATCATTCTTATAAGATAAATCCTCTCTCTCTCTCTA TATATATATATATATATATAATATATATAATATGTTGATTTTACTTTATGGCTAATTGACAGTATTTATTCATGGGACCA GAATGAATGAAATTCAAGGTTGAAGATCAGGGGAGATACATATGGTGGACATGTTCAAATATATAATATAATTGACCCTG ACTATACCTTGTTAAATTTCTAAGCAAAAGTGGGTAGTGGTGTCAAAATGGGCATGGTCTCTGGCCAGCCCATTTAACTT ACACTCTTTCTTATTGGAGTTACATTGAAAATTCTAGTAGATATTATCACAATATACCAGAACAAATCACAGCACATAGC ACATATTGGTGACATATATCAAAACTACCAATACACGACAAATGGAAAAGAACTTCCAAAGATTTCAAAAATGGTAACAA GATGCAAATAAATAAATAAATTAAAGAATGAATAGGAACCCTACCGGGATGAAGTCTTGTTTGAGTAGCTTATAGTGAGA AGAGGTTGACAAACAAGCCTTCAAGCTACAGGAAGATCATTTGCACCAAAATTAACAACTTGACTTGCTTGAAAATGAAA TTATATAATCAAATATTTTG
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0327700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAATGGTGCAATGACTCTGATAAGGAGAAGGGCAATGAATATTTAATCACGCCCACGAATACTCCTAAAGCTATCAT CAATCTCACAGAAGGAATTCATACAATAAAATGCCCCTCATGTAGCCATAACATGGAAGTCAGAGATCAGGGTGGAATTC ATGGATTGCCGGCTGGAGTGAAGTTTGATCCAAATGACCAAGAAATACTGGAGCATTTGGAGGCCAAGGTAGTTTCTGAT GTGTGCAAGCTTCATCCCCTTATTGATCAGTTCATACCAACGCTTCAAGGCGATAATGGAATCTGCTATACACACCCAGA AAAGCTACCAGGAGTTAGCAAAGATGGGCAGGTCCGCCACTTCTTTCACAGGCCTTCTAAAGCATACACAACAGGAACAA GGAAAAGAAGAAAGGTTCACACTGATGATGAAGGAAGCGAAACTAGATGGCACAAAACAGGGAAAACTAGAGCTGTTTTT GCTGGTGGTGGTGCAGTGAAGGGTTTTAAAAAGATTATGGTACTCTACACCAACTTTGGCAGGCAAAGGAAGCCTGAGAA GACCAATTGGGTGATGCATCAATACCATCTTGGCAGTAATGAAGAAGAGCAAGATGGAGAATTAGTTGTTTCAAAGGTCT TCTACCAGACACAACCTAGACAATGTGGTACTTCCATTATAAGAGATCCTCCATAG
Download CDS Sequence

Protein sequence (LotjaGi6g1v0327700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKWCNDSDKEKGNEYLITPTNTPKAIINLTEGIHTIKCPSCSHNMEVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSD VCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVF AGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFYQTQPRQCGTSIIRDPP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31079:SF20
1 227 227 4.1E-132 –
PANTHER
PTHR31079
1 227 227 4.1E-132 –
SUPERFAMILY
SSF101941
51 216 166 1.7E-37
IPR036093
ProSiteProfiles
PS51005
56 216 161 33.478
IPR003441
Pfam
PF02365
57 197 141 1.9E-22
IPR003441
Gene3D
G3DSA:3.30.310.150
65 221 157 7.4E-24
IPR036093

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0327700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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