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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0338700 |
| Transcript ID | LotjaGi6g1v0338700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calmodulin-binding protein; TAIR: AT5G57580.1 Calmodulin-binding protein; Swiss-Prot: sp|Q9FKL6|CB60B_ARATH Calmodulin-binding protein 60 B; TrEMBL-Plants: tr|A0A072V4D6|A0A072V4D6_MEDTR Calmodulin-binding protein; Found in the gene: LotjaGi6g1v0338700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:65301115..65307291) extracted from Lotus japonicus Gifu genome v1.2.
AAGTGAACAAAAACAAATTAAAACAAAAGATGTATCAAAAAGGATAAGGGAATTTATTCCCATTTAAAAAAAAAGTATAT TATCAATCACAAAAAGAATTGGATAAAGATGCTTGACCTTTCTTGTTGCTCTTTCTAGTTTATCCCTCAACTATTGTACT CTAGAGGCGTGACCTAACATCATTGGAATTGGTCCAAATGATTCATGCCTTAAACCTTCTTAAACAACATCTTATATCCA AATTGAGCCCATAAAAAATCTCTAGTGGAAAAATCTAAAACATCTCCAACACCTTCAATCTGACGCCATCATCCCTACCG TCGGTGAGTGACCCTACCTGCTGAATCACCCACCCCTGACAAATATTCTCAATCCAACGGCCCAAATCACGTTCCAGAAA ATCCACGGTCCACCCAACCCCAACAACCCCCTCCCTGATTCGCAAAAATCAGTTACTATTAGGGTGTGCTGTACAGTGTG CGTTGAATTGGAGAAGACGAGAAAATTCGCAGACGCTTCAACGAAATTTCTCAGATTCTGCACTTTCTGCTTTCTGCTTT CTGCTTTTCTATCCGCTTTCGATTCCGATCGAATCGATTCCTTTGCTGTTTCCCCTTTTGTATTTCATTTATTTGTTTAA CTGATTCGGAGACGAAATCTGCCAGCTGAGCTTGTTTGGATGCTGAGAAAACGAAGGAAAAGAACTGCAGATTCAAGCTG AATTCGGTGAGGTGTGGTGTGGCGGCGCTAGGGTAGCTAGGATTATTTTCTTTCACTTTCTCAGCAAACAAACAGGGTGA GGAGGAATTCAAGAATGCAGAGGAGATCGAACAGTATGACGAGGGAGAAGCGAGGGTTGGATTCAAGTGCTGCTGAGGAA GACCAGCCTGAAAGGAAACGACCTGCTTTGGCTAGGTAAATTGTTTCCGCATTCTAGATTATTTCATTTGTGCTTTAAGG GTTTTGGTTTAGATTTCTAGTGCTTATCTTTGAGTTTTGCCGATAAAATTCGATGCTCGAATCGCCAGAGATCATTCATT TATTGTTATGTAAATGCAATATCTAGAGTTCCAGATACTGTAAATATATAGATTCATTCCATGTACCTAGTCCAGAAATG GAAGCTTTGGTAGATTCATTTGGGATATGAAGTATTACTTGACTAGAACAATTTCCGGTTTAGGTCGTAATGAAGTGGAA TAGATACTACCACTACATATTCCATTTAATTAAAATGTGTGTAATGGGTCATAGGGTATGAGTGAGGGAATTAAATTTGT TGCCTGCATGGGTAAAAGTTTTCCAAATGCGGATGTAGCCATGTATACTTTAGTATTCCACCCCAGACTAAGGGTTTAAC CCATTGTCACCCGTACCTAGAATTAGACTACTCAAACATATTGTCCACCCATACTCATTTTATCATAGTATTAGTATTGA TGTGTTGGTTTGTTAAAGCTTAATTTGACGTCTTAAATTTGCTGATGAATGGATTTTTTCATCATTTATTTGTATCGATA TTTGCAGTGTAATTGTTGAAGCCCTGAAGGTGGACAGTCTTCAGAAACTTTGCTCATCACTGGAGCCTATTCTACGAAGA GTTGTAAGAACATTAATGTCATTGTAGTATTGATTTGATGCCTGCTGGACTATTTATTAGAAGTTATCACTTGCGTCTGA GACTGACAATTTGGCCCCGAAAACAACAAACGGGCTGTAGGCCAGTAGAAAGTTTTGTGCCCTGTAGGCTGGTTTCCCTC GCCTACATGTCACTACTGTGAAGCTTAAATAAATTGGGTAGAGAACTTGGGGTCTCATATTCAAACCTTAACAGTTAACA AGCTGAAAAGGGGGATTTTTTTTCTTCTAGAAACTTACTCCTTATGAAAAAGGCTTTCTGGAATAATATTTAATTACCTC ACTCGGATTCTACTTGTGATGAAGTCCATCATTCTGTAATGCGATGTCCATATGCCTTGTCTTGTCAAACAAAATTTTAT GGATTCATCTTATATCTTTTTGCATGTTGCTTCTAAATAGGTTAGCGAAGAAGTGGAGCGTGCTTTAGCAAAATTAAGCC CTGCCAAGCTTAGTGGGAGGTATATTTTGTCCCCTCAGAAGCTCCTTTAAATACTTTCTTATATCAAGTGTATATGCACA GCGTACGGTTTGACTAAGTACCACGCCTCGCTACTCCCACAGATTTCACATTTTATCATTAAGTATTTAATCTTGATTCA CCATTAGTGTGAAAGTTTTTTGCACTGTTATCCAATTAAGTGCTAGGCTTCTAGAGTTCTAGTGCATCATTAATTTAAAG ATATGCTCTCCTAAATCCTGATCTTTAACTTCTTATGCTTTGCTTTCATGGCATGATTCCTCTTGCCAATGACTTGTTTT CCTGAAGTTTAACACATGATTGAAGCTGACAGAGATCCTGTTGTATCTCAAAAGTCAAATTTAATGACCCATAATTGTTT GGTGTTACGTGTGTGGATCTTATCCTAACATATTGGCATGTATCATTTTTTTTTTCTAATACTCAAGTAAAATACAGATC TTCTCCCAAGCGCATAGAAGGCCCTGATGGCAGCAATTTGCAATTACAATTTAAGACCAGATTATCCCTTCCCCTCTTTA CTGGTGGGAAGGTGGAAGGAGAGCAGGGAACTGCCATACATATTGTTTTGATTGATGCTAACACAGGCCATTTTGTCACA TCTGGCCCAGCATCATGTGTCAAACTAGACATTATTGTACTTGAAGGGGATTTCAATAATGAGGATGATGATAATTGGAG TGAAGAAGAATTCGAGAGCCATATTGTGAAAGAGCGAGATGGAAAAAGACCTCTTCTAACTGGTGATCTTCAAGTGGCGC TGAAGGATGGTGTAGGAACACTAGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCCGGCTG GGGCTCAAAGTTTCCTCAGGATGTTGTGAGGGAATGCGCATTCGAGAAGGCAAAACAGAAGCTTTCACTGTTAAGGATCA CCGTGGAGAATGTAAGTACATAGCTTCATTAATTTTTTCCTTTCCTGATTTTATTGTAATGAAACTTATACTTGATTGTA GTATACAAGAAACATTACCCACCGGCCTTGAGTGATGAGGTATGGAGATTGGAGAAGATTGGCAAGGATGGGTCCTTTCA CAAAAGGCTAAAAAAAGCAGGTATATGTACTGTTGAAGATGTCCTACGACTTGTGGTCAGAGACCCACAGAGATTGCGCA ATGTAAGAATCTAGAAACTTTTTATTAGGGGAGCTGGGGAAGGAGTTTTAAGTTTGACCAAATGTTCAAATGCTTTTGGT TTGGGTTTGTCTGTGTGATATAGATTTTTGATCTATCCAAGATTCCAAGTTTTTCATATGTTAACTATCCTTATGTAGAT TCTCGGGAGCGGCATGTCGAATAAAATGTGGGATATTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTCT ATGTATATTATGCTGATGATGCAAGGAATATTGGTGTTGTTTTCAATAACATATATGAGTTGAGTGGCTTAATTGCCAAT GACCAATATTACTCTGCTGATACTCTATCCGAAAGTCAAAAGGTAGGTAAACCCGTACAGGAAATTTTGCACTTATGTTT GAATTTGGACTGTACTGTTGTATTTCTTCCATATATGCTAAATCTAATTCGTCTTTCCACTTATTGAAAATGTGGTCCAC CCTGGCGGCTTTGTTGTTGGTACAAGCAATTCTTCATCATCAGGGCATCCAGCCCTAAGAATATATACACTTAATTGGAT CCTCCGCTTGGCATGAAGTTGTTTTGCTTCTACTTTCAGAGTTCTTGCTGTATGAAACTTTTTGCTAGTTTAAGATCTTT CTCAGTCAAAGCCCAGACGGGGTATTCATTATGGGGTTTTTGGAACTAGAGTGAACAGATCAAATGCATAGTTGGCTTAA TACAAATACACCACTTATTGTTTTAGGTGTACGAGATAAGCTGGAAATTCTTCTTTCCCAGGAATTGGGAAATTTAAAGA AGTTTCTGTTTTAAAAGCAAAGAAAAAGGTGAAATTTCTGAAAAATGTGACTCTATTCTTGTAGGTTTATGTGGACACAT TGGTGAAGAAAGCATATGAGAACTGGATGCATGTTATTGAGTATGATGGCAATTCTCTGCTAGATTACAATCAGAATAAG AGTTTAGCCACCTCCCAACCTCAGGCTCCTGTGGTTTCCCTTAATTATTCAAATTCAAACTCACTTGATCAGCAGCAGAT CTCCATCCAAGGTCTATCAGTTCCTGTACCTACAGAGCAGCCGTCAATGGATCCAGGAGTAACAGTTGGAGGTATGTAGT TCCAACTTCCAAGTAAAAGATTACTATATTAGCAAAGCAAAAGAAGCACAAGGCTTTTGCAGTTTTAGTTTACATTGTTT CTTTTTAACTACCCCTTTCCACCTTTTTCCTGTTTTCTTTCTTTTCCTTGTATTTTTTTTTTCCTTTTTTACCCTGTCCA TGCATTCACCATCCTCAATGTTTCTCTTTGGTACTTGATTATGTGGACAGATTCTTCACACACACCCGAACCCTGCACAC ACCTTGAGCAGAAAACTTACTTTTTATTTAGATTACGCTAGAAAATAGCATTTACTTCTTAGATTTTAGAGGGCTTGACA TATATTGATATGATAGTTTTGTTACGCGTCTTATTGTGAAAACATTATCCCTTGAGGTTAATGTTAGCATAAGTGATCAT TGCATTACATGGCCAATTTATTGAGTTGATTTCATGAGATTTATGTGTGCAGGTTATTGTGATGGTGCGAATACCAGATT CTCAATGCAACCACAGAATGCAAATTTTAATTCTTCTATTCAGGTTGAAAATATTGCATTCCCATTACCAAACCAGCTGA TGAGTGCTTCACACTCTCAACTTCCAAGAAATGAAAATGAGCTCACCCTGGGTCCACCCCAATCAGCCACTCCTGGCTTT CAGAGTGTCAGTATCTCAAATCCTACCTATAGAGGATTTGAAGATTTCTTTCCGGAAGAAGAGATTCGTATTAGAAGTCA TGAGATGCTAGAAAATGAAGACATGCAACATCTGCTCCGTATTTTTAATATGGGAGGGCAATCTCATGCTTCCTTTAATG CTCCTGAAGATGGATACCCTTATTCATCTGCTTATATGCCTGCAACTTCCACGAACTACAACTTAGATGACGAGCGAAAC CGTTCCTCAGGTAAGGCTGTTGTGGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAAAGC TGCTGAGAGGCGGGCACAACTTGTTGAGCTGGTTGACTCGTAAAATATGATATTGGAGGCATGTCATCTGTGATGATCTG ACAATAATAGCATCAAATGCTCCTCTTATGGCATCCAGAGTTGTTATCATGCTGATTTTTAACAGCATGAGTAGACAAGA AATCTTGATTGAATTTTTGTGTGCAGCAACCTTTGCTGTGACTGTATAGGAAGATCACTATGCAACAACTCTAATATATG GCTTTCCTTGTGATGTTTTTCCAATCTTCATTCTTGCCTGCACATTGTGAAGACCTGGCCGTTTTTACCGCCTGGTTTAA ACAGAAGAAGTTTGCAGTGGCTTAAACCTGCCAGGATCTCGGTCTGGAAAGTCGGAAAGACTGTGTTGTTTGTTTACATT AGCAGGGTGTAGCTGAAGAATGTTGTGTTTTATTGCTTTGTAAAGTAGTTATGATCAATACCATTGCAGGAGTTGGAACT GGTATTTGCTTGTTTGCTTTATGGATGTTTCAGCAGGCTTACGAGTCTGCATTCCTTGTCAGGGGCTGAGACTTCTCACT TCTGATACATATTTAATATTCCCGGATGGGCTGATAAATAAATCACTCATTTTTAACTGAGAATTTCACATTTTACATTT CATATGCGAGTGTTTATTTTTTTTTTGTCGAGTCGAGTGTATGCTTTTAAAATGGAGCAAGACTAAGAACACCACCTACA AGTCTAAATAGTAAATATATCATCCTTGCACCATACCCCTGGTAAATTAAAGTTCTGGAAATTAAAATCCAGAACACAAT TATTCGAACTACATTTG
CDS sequence (LotjaGi6g1v0338700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGAGGAGATCGAACAGTATGACGAGGGAGAAGCGAGGGTTGGATTCAAGTGCTGCTGAGGAAGACCAGCCTGAAAG GAAACGACCTGCTTTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTGGACAGTCTTCAGAAACTTTGCTCATCACTGGAGC CTATTCTACGAAGAGTTGTTAGCGAAGAAGTGGAGCGTGCTTTAGCAAAATTAAGCCCTGCCAAGCTTAGTGGGAGATCT TCTCCCAAGCGCATAGAAGGCCCTGATGGCAGCAATTTGCAATTACAATTTAAGACCAGATTATCCCTTCCCCTCTTTAC TGGTGGGAAGGTGGAAGGAGAGCAGGGAACTGCCATACATATTGTTTTGATTGATGCTAACACAGGCCATTTTGTCACAT CTGGCCCAGCATCATGTGTCAAACTAGACATTATTGTACTTGAAGGGGATTTCAATAATGAGGATGATGATAATTGGAGT GAAGAAGAATTCGAGAGCCATATTGTGAAAGAGCGAGATGGAAAAAGACCTCTTCTAACTGGTGATCTTCAAGTGGCGCT GAAGGATGGTGTAGGAACACTAGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCCGGCTGG GGCTCAAAGTTTCCTCAGGATGTTGTGAGGGAATGCGCATTCGAGAAGGCAAAACAGAAGCTTTCACTGTTAAGGATCAC CGTGGAGAATTATACAAGAAACATTACCCACCGGCCTTGAGTGATGAGGTATGGAGATTGGAGAAGATTGGCAAGGATGG GTCCTTTCACAAAAGGCTAAAAAAAGCAGGTATATGTACTGTTGAAGATGTCCTACGACTTGTGGTCAGAGACCCACAGA GATTGCGCAATATTCTCGGGAGCGGCATGTCGAATAAAATGTGGGATATTCTTGTTGAGCATGCAAAGACTTGTGTTCTC AGTGGAAAACTCTATGTATATTATGCTGATGATGCAAGGAATATTGGTGTTGTTTTCAATAACATATATGAGTTGAGTGG CTTAATTGCCAATGACCAATATTACTCTGCTGATACTCTATCCGAAAGTCAAAAGGTTTATGTGGACACATTGGTGAAGA AAGCATATGAGAACTGGATGCATGTTATTGAGTATGATGGCAATTCTCTGCTAGATTACAATCAGAATAAGAGTTTAGCC ACCTCCCAACCTCAGGCTCCTGTGGTTTCCCTTAATTATTCAAATTCAAACTCACTTGATCAGCAGCAGATCTCCATCCA AGGTCTATCAGTTCCTGTACCTACAGAGCAGCCGTCAATGGATCCAGGAGTAACAGTTGGAGGTTATTGTGATGGTGCGA ATACCAGATTCTCAATGCAACCACAGAATGCAAATTTTAATTCTTCTATTCAGGTTGAAAATATTGCATTCCCATTACCA AACCAGCTGATGAGTGCTTCACACTCTCAACTTCCAAGAAATGAAAATGAGCTCACCCTGGGTCCACCCCAATCAGCCAC TCCTGGCTTTCAGAGTGTCAGTATCTCAAATCCTACCTATAGAGGATTTGAAGATTTCTTTCCGGAAGAAGAGATTCGTA TTAGAAGTCATGAGATGCTAGAAAATGAAGACATGCAACATCTGCTCCGTATTTTTAATATGGGAGGGCAATCTCATGCT TCCTTTAATGCTCCTGAAGATGGATACCCTTATTCATCTGCTTATATGCCTGCAACTTCCACGAACTACAACTTAGATGA CGAGCGAAACCGTTCCTCAGGTAAGGCTGTTGTGGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTC GGAAGAAAGCTGCTGAGAGGCGGGCACAACTTGTTGAGCTGGTTGACTCGTAA
Protein sequence (LotjaGi6g1v0338700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQRRSNSMTREKRGLDSSAAEEDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLSPAKLSGRS SPKRIEGPDGSNLQLQFKTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHFVTSGPASCVKLDIIVLEGDFNNEDDDNWS EEEFESHIVKERDGKRPLLTGDLQVALKDGVGTLGELTFTDNSSWIRSRKFRLGLKVSSGCCEGMRIREGKTEAFTVKDH RGELYKKHYPPALSDEVWRLEKIGKDGSFHKRLKKAGICTVEDVLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVL SGKLYVYYADDARNIGVVFNNIYELSGLIANDQYYSADTLSESQKVYVDTLVKKAYENWMHVIEYDGNSLLDYNQNKSLA TSQPQAPVVSLNYSNSNSLDQQQISIQGLSVPVPTEQPSMDPGVTVGGYCDGANTRFSMQPQNANFNSSIQVENIAFPLP NQLMSASHSQLPRNENELTLGPPQSATPGFQSVSISNPTYRGFEDFFPEEEIRIRSHEMLENEDMQHLLRIFNMGGQSHA SFNAPEDGYPYSSAYMPATSTNYNLDDERNRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELVDS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 28 | 28 | - | – | |
| PANTHER | 8 | 627 | 620 | 0.0 | – | |
| PANTHER | 8 | 627 | 620 | 0.0 | ||
| Pfam | 93 | 384 | 292 | 3.2E-130 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calmodulin binding | Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states. |
Expression pattern of LotjaGi6g1v0338700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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