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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0341300 |
| Transcript ID | LotjaGi6g1v0341300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Equilibrative nucleoside transporter family protein; TAIR: AT4G05120.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9M0Y3|ENT3_ARATH Equilibrative nucleotide transporter 3; TrEMBL-Plants: tr|K7MA00|K7MA00_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0341300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:65501671..65504692) extracted from Lotus japonicus Gifu genome v1.2.
TTCTGAGTAATAGCGTGCGTCAATTACTACTCCATCACCAAAGTATATTAGAGTAAGACCTTCCTTGACATCAGCCAACG TTACTATAAGACCCGACGTGATTAAATGTCACACTAGCTGTCACTACCTACATATGTTAATTTTCTCCTAGAATCACTCC CAACTCATATAAGAATCACTATATTCAATGGTGTGAATATTGAAATTGAAATTGATTATTCACTCCACACAACTCTGCCT CACTTCTTTCTCAGATTATAATCCCTATATATTTCAATATTTGTACACTTTCTCTTTGTTTGATTTTGCGTACAAGGTTC AAATTCGGTTTATTAGGCACGTACGTCTGGTTTACTTTCTCTTCATTCATTCATGTTGCTTAATTTATTTTCTTCAATTC CATACAGTCCATGAAGTATTTATTTCCTTGAAAGAATTCTACAAATTGTGTGTGTTCATGCTGATTTAATTGCTTCTGAC AGGGATTAGTCATGACAGTTTCTGATGAAAATGGAGCAGCAACAAAGCTCAAGGTATTTGTACTACAAATTATTAACCAT GACTAACATTACTGTATTTTATTTTGTTCATGATTGTTGTTTGATGGCAACAACAATTTCAATTCATTTATTCTGAGCAG GGGAAATTTCAAGCCACGGCTGTGTGTTTCATTCTAGGACTTGGATCCCTGGTTGCGTGGAATAGTATGTTGACAATAGG AGATTACTACTACAAATTGTTCCCTGTGAGTATCTCATCACTTCTTCAGTTTCAAGTGAACCAACAATGATTTTAGAATC TCCAGTTTTCATTTTTAGTAGAAATATTGATACAAATTGAAGTGACTGTGAAATTGGGGAAATGTGAATGCAGGAAAAAG TGTCTATTATCTTTCAATGTTCCAACTGTAATAGAAATGTGCTTGTAAATTGCAATTTATTGTCAAATAATTGTGAGGTA TTGCTCTAACAAGTTATTTCCTGTAGAAATATCATCCGTCGCGAGTACTCACCCTCGTTTATCAACCATTTGCACTGGTA ACTATGACAATACTAGCCCACTATGAGTCAAGGATCAACACTAGGATGCGGATATTAGCAGGATACAGTCTTTTCTTTGT TAGCACTTTGTTAGTTCTTGTTGTAAGTACTAGTTCTCCAATTCAGTTAATTATTTTCTTCTTCAGAAAGTATACAATTC ATTATCTCCATGATTCTATATCATTTGATGTTTGCTACACCTAATTTAAGTGAATTTCATCTAATAGCTTCTGAATACTT TGTGTGACAGCTAGATCTAGCAACATCAGGGAAAGGGGGGCTTGGAACTTATATTGGCCTGTGTGCACTTTCTGCTTGTT TTGGATTCGCAGATGCTCTTGTCCAAGGTGGTATAGTTGGAGACATGTCTTTTATGTGTCCTGAGTTCATCCAGGTTGGT TTCACGCGTCTCTATATGTTGTGAAATTCTTATATGCTTGTGGAGTAAGTGAAACATCTTACTGAGTCTAAGGATATCAT GAATGTGCGTGTTTTTCTTGCATCTATTGTCTTGAAATAATAGTTTTGTTCTGTCTTCTTGACTAAATCATATCGTTTTA ATGCGCCGCAGTCCTTCCTAGCTGGTTTAGCTGCCTCAGGAGCTCTAACATCTGGTTTGAGACTTCTCACCAAAGTGGCT TTTGAGAAGTCTGATAATGGGCTTCGAATCGGAGCTAGTATGTCACTCTTACTCACTAATGGACATGTGCTTTTCAGCTT TACTCTCAATGGATTTTGATTTTGAAGCTTCTATTCTTCGATATATGATGGTTAATTCCTTATTTTGCAGTAATATTCTT TGCAATCTCAACTTGCTTTGAGTTAATATGCATTGTTCTCTATGCGAGCTATTTCCCTAAGTTTTCCATAGTAAAGCATT ATCGTTCAAAGGCCGCCTCAGAAGGATCGAAAACTGTTTCAGCGGATCTTGCAGCGGCTGGCATTAAGAATGAAATAAAT GATGAAGTAATGTAACTTGTGTTAAACTGATTTTATATATGCTAAGCACCAGCAAGTACTTTTTAATGACTTGAAACACT TTTGGAACTAATGCAGGTCGGATTTGATGCTAAACCACAAGAACGACTCAGCAATAAACAACTATTTCTTCAAAATATTG ATTATGCAGCTGATTTATTTCTGATATATGTTTTAACCTTGTCAATTTTCCCTGGTTTCTTGTTTGAAAACACTGGATTA CACAAGCTAGGGGATTGGTAAGCACTTATTAAATAATTCCCAATTTTTTGGTCATCCAAGTGAGTTTTCAAATGACACAT CTAGTGTTCTTTTTAGGTACGCACTTGTTTTAATTGCAATGTACAATGTCTTGGATCTAATATCCAGATATATTCCCCTG ATCAAATGCCTGAAGTTGGAATCCAGAAATGGCTTATTCATTGCAATTCTGTCTAGATTCTTGTTGATCCCTGCATTTTA CTTCACAGCAAAATATGGTGACCAGGGATGGATGATTTTCCTTGTGTCATTCTTGGGACTAACCAATGGCTATCTCACTG TTTGTGTGCTTACAGTCGCACCCAAAGGTTACACGGTAAATTCTTTAGCACTTTTTTCTAATCTCCACCATGTTCATAAA TTATACAGAATGAACTTTGAGTATCAATTGATTTTGTTTGTCATATGTTTATGGTTTTGTAGGGTCCTGAACAGAATGCA TTAGGTAACTTGCTTGTGGTGTTTCTTGCGGCTGGCCTATTTGCTGGAGTAGCTCTTGATTGGTTGTGGCTTATAGGGAA ATCAGGATTCTAAAATGAAGCAATCTATGTAAATACTGATTTTTTAGGTGGTTTCTCTTTGCTTAAGCGGGTATTAAGCA CCTAGGTAATGCTTCCATCTTAAAGCCATGGTTTAGATTGGCAGAACATCATTTAATAAAACAATTTTTCTTTTTATGTT TATTCCATGTGACTACAATTTATGCATCCGCCTTCCTCAAGTTGAATTTTCCTAAATTCATC
CDS sequence (LotjaGi6g1v0341300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAGTTTCTGATGAAAATGGAGCAGCAACAAAGCTCAAGGGGAAATTTCAAGCCACGGCTGTGTGTTTCATTCTAGG ACTTGGATCCCTGGTTGCGTGGAATAGTATGTTGACAATAGGAGATTACTACTACAAATTGTTCCCTAAATATCATCCGT CGCGAGTACTCACCCTCGTTTATCAACCATTTGCACTGGTAACTATGACAATACTAGCCCACTATGAGTCAAGGATCAAC ACTAGGATGCGGATATTAGCAGGATACAGTCTTTTCTTTGTTAGCACTTTGTTAGTTCTTGTTCTAGATCTAGCAACATC AGGGAAAGGGGGGCTTGGAACTTATATTGGCCTGTGTGCACTTTCTGCTTGTTTTGGATTCGCAGATGCTCTTGTCCAAG GTGGTATAGTTGGAGACATGTCTTTTATGTGTCCTGAGTTCATCCAGTCCTTCCTAGCTGGTTTAGCTGCCTCAGGAGCT CTAACATCTGGTTTGAGACTTCTCACCAAAGTGGCTTTTGAGAAGTCTGATAATGGGCTTCGAATCGGAGCTATAATATT CTTTGCAATCTCAACTTGCTTTGAGTTAATATGCATTGTTCTCTATGCGAGCTATTTCCCTAAGTTTTCCATAGTAAAGC ATTATCGTTCAAAGGCCGCCTCAGAAGGATCGAAAACTGTTTCAGCGGATCTTGCAGCGGCTGGCATTAAGAATGAAATA AATGATGAAGTCGGATTTGATGCTAAACCACAAGAACGACTCAGCAATAAACAACTATTTCTTCAAAATATTGATTATGC AGCTGATTTATTTCTGATATATGTTTTAACCTTGTCAATTTTCCCTGGTTTCTTGTTTGAAAACACTGGATTACACAAGC TAGGGGATTGGTACGCACTTGTTTTAATTGCAATGTACAATGTCTTGGATCTAATATCCAGATATATTCCCCTGATCAAA TGCCTGAAGTTGGAATCCAGAAATGGCTTATTCATTGCAATTCTGTCTAGATTCTTGTTGATCCCTGCATTTTACTTCAC AGCAAAATATGGTGACCAGGGATGGATGATTTTCCTTGTGTCATTCTTGGGACTAACCAATGGCTATCTCACTGTTTGTG TGCTTACAGTCGCACCCAAAGGTTACACGGGTCCTGAACAGAATGCATTAGGTAACTTGCTTGTGGTGTTTCTTGCGGCT GGCCTATTTGCTGGAGTAGCTCTTGATTGGTTGTGGCTTATAGGGAAATCAGGATTCTAA
Protein sequence (LotjaGi6g1v0341300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTVSDENGAATKLKGKFQATAVCFILGLGSLVAWNSMLTIGDYYYKLFPKYHPSRVLTLVYQPFALVTMTILAHYESRIN TRMRILAGYSLFFVSTLLVLVLDLATSGKGGLGTYIGLCALSACFGFADALVQGGIVGDMSFMCPEFIQSFLAGLAASGA LTSGLRLLTKVAFEKSDNGLRIGAIIFFAISTCFELICIVLYASYFPKFSIVKHYRSKAASEGSKTVSADLAAAGIKNEI NDEVGFDAKPQERLSNKQLFLQNIDYAADLFLIYVLTLSIFPGFLFENTGLHKLGDWYALVLIAMYNVLDLISRYIPLIK CLKLESRNGLFIAILSRFLLIPAFYFTAKYGDQGWMIFLVSFLGLTNGYLTVCVLTVAPKGYTGPEQNALGNLLVVFLAA GLFAGVALDWLWLIGKSGF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PIRSF | 3 | 417 | 415 | 3.3E-81 | ||
| PANTHER | 4 | 416 | 413 | 1.5E-218 | ||
| PANTHER | 4 | 416 | 413 | 1.5E-218 | – | |
| TMHMM | 19 | 41 | 23 | - | – | |
| Phobius | 21 | 44 | 24 | - | – | |
| SUPERFAMILY | 22 | 406 | 385 | 1.83E-6 | ||
| Phobius | 45 | 55 | 11 | - | – | |
| TMHMM | 56 | 73 | 18 | - | – | |
| Phobius | 56 | 75 | 20 | - | – | |
| Phobius | 76 | 86 | 11 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 87 | 106 | 20 | - | – | |
| Phobius | 107 | 111 | 5 | - | – | |
| PRINTS | 107 | 127 | 21 | 1.4E-5 | ||
| TMHMM | 112 | 134 | 23 | - | – | |
| Phobius | 112 | 132 | 21 | - | – | |
| Pfam | 125 | 412 | 288 | 2.8E-31 | ||
| Phobius | 133 | 143 | 11 | - | – | |
| Phobius | 144 | 162 | 19 | - | – | |
| TMHMM | 147 | 169 | 23 | - | – | |
| Phobius | 163 | 181 | 19 | - | – | |
| Phobius | 182 | 206 | 25 | - | – | |
| TMHMM | 184 | 206 | 23 | - | – | |
| Phobius | 207 | 265 | 59 | - | – | |
| Phobius | 266 | 285 | 20 | - | – | |
| TMHMM | 270 | 287 | 18 | - | – | |
| Phobius | 286 | 296 | 11 | - | – | |
| Phobius | 297 | 316 | 20 | - | – | |
| TMHMM | 297 | 316 | 20 | - | – | |
| Phobius | 317 | 327 | 11 | - | – | |
| Phobius | 328 | 348 | 21 | - | – | |
| TMHMM | 329 | 346 | 18 | - | – | |
| Phobius | 349 | 353 | 5 | - | – | |
| PRINTS | 353 | 369 | 17 | 1.4E-5 | ||
| Phobius | 354 | 378 | 25 | - | – | |
| TMHMM | 356 | 378 | 23 | - | – | |
| Phobius | 379 | 389 | 11 | - | – | |
| PRINTS | 390 | 414 | 25 | 1.4E-5 | ||
| TMHMM | 390 | 412 | 23 | - | – | |
| Phobius | 390 | 413 | 24 | - | – | |
| Phobius | 414 | 419 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleoside transmembrane transporter activity | Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Nucleoside transmembrane transport | The directed movement of nucleoside across a membrane. |
Expression pattern of LotjaGi6g1v0341300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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