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LotjaGi6g1v0347800.1

Overview

Field Value
Gene ID LotjaGi6g1v0347800
Transcript ID LotjaGi6g1v0347800.1
Lotus japonicus genome version Gifu v1.2
Description Oligopeptide transporter, putative; TAIR: AT5G64410.1 oligopeptide transporter 4; Swiss-Prot: sp|Q9FME8|OPT4_ARATH Oligopeptide transporter 4; TrEMBL-Plants: tr|A7UQT0|A7UQT0_MEDTR Oligopeptide transporter OPT family protein; Found in the gene: LotjaGi6g1v0347800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:66052980..66059820) extracted from Lotus japonicus Gifu genome v1.2.

ATTCGTCATCTAAAACAAAAGGACAAAGTGTACATTACTAAATTTAAAATTGTAACACCACTCACATAAACAATGAATAT ATGAAGCTCATCATTCCCCTTAATCATGATCCTGCACAAGTGAAGTCCTCCAAAATTGAATGTAACGAAAAACAGCTCAA CCAAGAAACCACCATGAACTCCGACACAGAGAAGCAAACCACGGCGGCCACAGACGTAGACATAGACGAAGATGAACTAT CTCCCGTGGAAGAAGTCCGTCTAACCGTAACAAACACCGACGACCCGACCCAACCCGTATGGACATTCCGGATGTGGTTC CTGGGTCTACTCTCATGCTCCCTCTTGTCCTTCCTCAACCAGTTCTTCGCTTACCGCACAGAGCCACTCATCATAACACT CATCACCGTTCAAGTCGCCACCCTCCCAATGGGCCATTTCATGGCGACGGTGCTTCCAAAAACGAAGTTCAGGGTCGGGT CGAAAGTGCTGTCGTTCAACCCGGGTCCGTTTAACATGAAGGAGCACGTTCTGATAACTATATTCGCCAATGCCGGAAGC GCATTCGGATCCGGGTCGCCGTATGCGGTGGGGATTGTGAATATAATAAAAGCATTTTATGGACGCAGTATCTCCTTTCA TGCTGCTTGGCTTCTCATCATTACCACTCAGGTAACTTAGTGAGGTTAATCATTATTCTTTTTTTTTTCTTGATTTTTTT ATTTGAAAAGTATATACTAAAATTTATCTATTTACCTTTTTTTCCCTTTTGATTGGTGTTTCCTCGTATTATATATTTTA CTTGAACTTGTTCCTTCTTCCTTCTTCCTTCCCTTTCTTTTGCAGAACGATGCCTTGAAATCCCATTAATTCCACCATAA ATGGAGTGATACAATATATTCTAATATAGAACTAGATATAATTTATCCTAATTGTTGAGGTGTTGTATGGGTTGTTAATA ATTACTACATAATAATTATGTGTGTATTATTATTGTCAAACCACTAATTATCTCAAAAGTTTAAGCTGTTAGGTAACGAT TGAATGAACGGTTTTATATTTTTTATAACACGCCACCTCATGCAAAAAACCTTTGGACTTGAAGTGTGAATAATGCACAT GCTCACTTACTAGAATCGAACTCTAGACTGCTAAGTTATATATGTTCTAAACTTCTAATACTATGTCAAATAATCAATTA TCTCAAAAACTTAAGTTGTTGGATAACGACTAAATGAACAATTTTATATTATATTCTAATAATTATACTCATTTTATATT ATTTTAAGAGATTTTGTTTGGTATATAAATTTTAAGATAAGGGAATACATCCCTGCAAGATAGTGTATTACTACATTTAA CCAACACTTTGAGGACATTTAAGAGAAAAATATATATGAGTGACCTAAAATAATAAACAAGTTTATTAATATTAGGTCTA AAACCATTTTGCAGTTTAATTCAACTATTCACACCTTAAAAAAAAACTATTCACAAATTGTGACGTGAATTATTAGAAAT AATAATGGAAATTATTTGTCTCTTGTTCAACAATTTTTTTTTTTTGAAATAATTAGTTTATGATATAATATCAGATCCTC AATGGGCAAACAGTTTAAACTCTAGAATTCGATTATCGCTACTTGTTCCTTGATTGACATGAATTATGTGTTTGCTTGCA GGTACTAGGATATGGATGGGCAGGGTTGCTGAGGAAGTACGTGGTGGAACCAGCCCATATGTGGTGGCCCAGCACTCTCG TCCAGGTCTCTCTTTTCCGGTATGTATGCCATAATGCCAATCAAAACGAGTCCCTCTTTAATCAAATCATATATGTACCA TTTAGTATTTACTTTTTAATAGAATACTCTTGGCTTATAGAACTGCGATTAGGATGAACTATGAAACATGCATTAAGAGA GAACAAAATAACAATTGGGTTTCGTAGAATTTAATTTGTGGAAATCACATGTCTTGTTTTATTTTCACACAACTTGATCT TATTATAAAAGGGGTTGTCTTTTGTCTAAGTCATTGATTTCTAAGTTGAACTTATCCTGCACTGTATCATGCATTATTTA ACGTGTAGTACGTATGAAATGGAGAAAATTGCACTATTATATTGAGATCATTTTCTTAGGCATAAATTGAGGAGGGAGAT ATGATGGATCGATGAAGATAATGCTTGAGTATATTGGTGGGAAATAATGACACTGAGCTGGCCCAGCTGTGCCATAAAAG ATTCATGTCAGATTCCACACAAAAAATTCAGATTCACACAGTTGACTTTTAGTAAAAGAAAAAAACAGTGTTGACTTGGT ACACGGTTAACGTCCGTGTCAAGCATTTATTAAGCTTGATTCGGTTCGGTTCAAATCTATGGTCCTTGAATTAGCGTCAC AAACCACAATTACTCTCTCCTTTCACTTATATTCAATATTTCAATTCTCTTAGAGTAATTAGAAAATATGAAAGTAGATT TATAAAGAAATATTTAATACATCCTAGATATTATAAAGGGACTATACTTGAATGCATGGAGGAAAATTTGAGAAGTAATG TAGATTCATGCGTTGAAGTCAACTTATATATCAAAATTTTGTTTCTTCAATGTTAAACTCAACTTGATCATGCATTAAAA TACGTGAAATCATATTTAGTTAACTCTAACGTTAAGCTAAACATGCACACAATCATTTTTATTTAGCGTAGTTTTGATTC ACATAATTTTTTTACTGTAAATCCAAACATGTAATTTGATTTGACCAACAACCCGGAAAAATTGCTTGTGATTAGGAAGA CTTGTTTCTACATAAATGAGGAGAATAAAGAGAAATTTTCACTTTTAATTATTTCTATTATCTATCTAAACAATAGATAA AAAACCCACTCATTTTCTATTATCTTGATCGATTTTATTTTTATCCATTTCTTACTCTCTCATGATATACTAGCATTTTT ATTTTTCTTGACTTGGATTCTGGCTATTTACCAAAAAACTGTTCGTCTGGTATGCAGAGCATTGCACGAGAAAGAAGACC GCAAACTCTCAAGAGCAAAGTTTTTCACCATTGCACTAGTTTGCAGCTTCTCATGGTACGTGATCCCTGGATACTTCTTT ACAACGCTAACAAGCATCTCATGGGTCTGTTGGGTCTTCTCCAAATCAGTCACAGCTCAACAACTCGGTTCAGGTTTGAG AGGTTTGGGACTCGGAGCAATCACACTGGACTGGACTGCTGTTGCTTCATTCTTGTTCAGTCCTCTTGTCTCACCATTCT TTGCCATTGTCAATGTTTTTGTGGGATATGTAGTCATAGTCTATGCTGTGATTCCTATTGCATATTGGGGTTTGAATGTG TATCAAGCAGATAGGTTTCCTATTTTCTCCTCACACTTGTTTACCTCTGAAGGTCAAAAGTATAATATATCTAATATTGT CAATGACAAGTTTGAGTTGGATGTTGAAAAGTATACCCAGCAAGGTAGAATTCATCTCAGTGTGTTTTTCTCTCTTACTT ATGGGTTTGGATTTGCCACCATAGCTTCCACTCTTACTCATGTTGCCTGCTTCTATGGAAGGTAATGCTACTCAAATTGT TCAACAGTTTTGTTTAATTTCTTAGTATAGCCCTTGTTTGGAAGAGCTTATTTGAGTTTATCGTATATCATAAGCGTTTA TGCAAGTGTTTCTGAGAGCTTCTCACAGTAGCTTATGACCTAGCTGTTTTGAGGTTATTTTCTTAAGTTGCTGGCAAATG AATAAGCGCTAATGTGATACCATAATCACTTCATTAAGGTGTTATTGAGTTTGAAAATTCTGGAACAAAAAGAAGATTCC TAAATCTGGGATGTAATGTAATATTGAGTTTGAAAATTTTGGAACAAACATATACAACAGTATGTTCTCAAATCTATATT GCTTTTGTTGACAGAAGTTAATTTAATTTATATGATTCAAAAGTACTCTGTAGTTGCATATTGTACAAACTAATGAATAT CTGCATTATAGTTCTCAGAATTCTAGAAAATTTACTTATGTAGGCTAGAGGTTTAGAAATTTTATGCTTTAAAGAATAAC TTGGGTACATATTGTATTAAAAGGATGGATTGGATTAAAACATTTGTGATGATTTTCTAAAACTTTCAAGAGTTCATGTT CAATGTCTAAAACATTTTTAATGAGCTAGCAGCTATATCATTGAAAAAAATGCTATGTTTTGATTGATGTATAACTAAAT ATGTAGGGAGATTATGGAGCGCTACCGTGCTTCTTCCAAAGGAAGAGAAGATATCCACACAAAATTGATGAAAAGATACG AAGACATACCTTCTTGGTGGTTTTATGCATTGCTGGTTGCGACGCTTGCAATTTCTCTTGTGCTATGCATCTTTCTAAAT GACCAGATTCAGATGCCATGGTGGGGACTTCTCTTTGCTGGAGCACTAGCTTTTGTGTTTACCCTCCCCATTAGCATCAT AACAGCCACCACAAACCAGGTTAATATCATGAAACTTTTGCACCCTTTTATGTGAAAACTGAAAAAACAAGCATTGGCCA AGTCTCCCTTGTGCTATAACTAACTTTTATTTGAAAGAAACAGGGGTGACAAAGATGAAGCTCATAGAGAATTGGTCAAA GGAGTTCTAACTATTTCAAATCCAATTGCTTCAAAAACTTAAAAGTCCTAAACTGTTAGATGAAGACATAATTGATTCAA TATCTAATATTTATCTACAAAATGAAATGGAGATACATACATTATACTCTCATAATTCTCTGAATTGGCATGAACTAGTT AGAAATAGAAACTTTATCTTTTTTGGATCGAGATCTGTCCCCAAATGATCTCATTTCTTGTCTCAAACAATGAAATTATA CCATGTCAATTAAAATATATACATATGACATTTATAACCTTATATAGGTGGTTTTTAATTGACATGACATAATCTTATTG ATGAGACATGGAATGAAACACCATTTCGGACAAAGGATCTTGAACTGTCTTTTCACATGTCTTATGATAAACTAAATACT GATATTTTTTAAATAATGCTCAATTTGAAATGCTTTATCAATGACCACTTCTGAATCTAAGAGCAGTTTATGATCAGATG ATGCTATTATGTTTGTATCTTGTGTTATATGTAACTTTAGCTGGATAGTCTTCTTCTGATTTTGCTCTTAACTGGATAAC AAAAACTGAAGTTTTGGCTGCTTCTCTCTGATGCTCTGTCTGCAGACACCCGGATTGAATATCATCACGGAGTATGTCTT CGGTCTAATATACCCTGGAAGACCAATAGCAAATGTATGCTTCAAAACCTATGGTTACATCAGCATGGCGCAGGCTGTCT CCTTCCTCAGTGATTTCAAGCTTGGACACTACATGAAAATCCCTCCAAGATCAATGTTCTTAGTTCAGGTATATTCTCAG AGGAAAATTCCACTCTTCCCTAATATTATGTTGAGTTTATATCCCACCTGATAATTATTTACTTACCAATTACCATGATC ATATGAAGAAAAACAAAACTAATACCTAATTTAGGCACAATTATGATACCTTACATGCTGATATTACATTTCTTCTATAG TTTCTGATGCATTCAATTTGTTCATACATGTGTATAGTTCATAGGCACAGTGCTTGCTGGAACGATCAATATTGGGGTAG CATGGTGGTTACTGAATTCTATTGATAATATATGTCACGACGAAATCCTTCCCCCAGGAAGTCCCTGGACATGTCCTGGT GATCGCGTGTTCTTTGATGCATCAGTCATTTGGGGACTGGTAGGACCATTGAAGATCTTTGGTTCTCAAGGAAACTACCA TGCAATGAACTGGTTTTTCCTTGGAGGTGCAATAGGCCCTATACTTGTTTGGTTACTGCACAAAGCATTTCCTAAACAAT CATGGATTCCCTTAATCAACCTTCCAGTTCTGCTAGGAGCAACTGGAATGATGCCACCAGCAACACCATTGAACTACAAT TCATGGATTTTCGTCGGAACAATTTTCAACTTCTTCATCTTCCGTTACAGGAAGAAGTGGTGGCAGAGGTACAACTATGT TCTGTCAGCAGCACTGGATACTGGGGTGGCTTTTATGACTATTTTGTTGTACTTTTCACTGGGATTGGAAAACAAGAGTA TTACTTGGTGGGGAACTGATGGTGAACATTGTCCACTGGCATCTTGCCCAACAGCAAAGGGCATAAGGGTTGGTGATTGC CCAGTAAACTTGTGATTGTGGGCATTTTTAATGGTTTAATTGTTACAATACCACTCAGGGAAAGCACTTATTGAGAAATG CAAAATGTAATATATAACGGTAACTATATTTGCCAGTAACTGGCTAGTGTAACATGGTTTATCAGGTATTACTCTTCCTA TGGATTTTCTTTCTTATTGGGATAAAAATGAAATCTTCAATTTATGTAAATCAATGTTTGAAGCTCATGTGCCATCGTAA ACATATCATTATACTTTACTCTGCAGCAATGCTATATGTTAGGAATAAAGTTTGCAATAAGCTCAAGCTGAGGTGGTAAA ATAAATAGTGTTAAGGAATTGTTTGACTATTTCTTAAAGTATAGCAGCTGATTTTAGAATCAGATATTCTCATTTAATAT GATGCCAAATCTGTTAGCATGATTGGGTACAATCACAATATGATCATATCCCTGAATTTCCTCATTATTATAATTCCTTG TGTATCCCTTGCTGTATATATATGTATCTGTACAACAACTATTGTTTGCATTCTATTTTCTTTCTTTTGGTTGGTATGAA AGCAATAAAATAAAAATGTTAGAAGAAAAGGGAATTTTGAC 

CDS sequence (LotjaGi6g1v0347800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGCTCATCATTCCCCTTAATCATGATCCTGCACAAGTGAAGTCCTCCAAAATTGAATGTAACGAAAAACAGCTCAA CCAAGAAACCACCATGAACTCCGACACAGAGAAGCAAACCACGGCGGCCACAGACGTAGACATAGACGAAGATGAACTAT CTCCCGTGGAAGAAGTCCGTCTAACCGTAACAAACACCGACGACCCGACCCAACCCGTATGGACATTCCGGATGTGGTTC CTGGGTCTACTCTCATGCTCCCTCTTGTCCTTCCTCAACCAGTTCTTCGCTTACCGCACAGAGCCACTCATCATAACACT CATCACCGTTCAAGTCGCCACCCTCCCAATGGGCCATTTCATGGCGACGGTGCTTCCAAAAACGAAGTTCAGGGTCGGGT CGAAAGTGCTGTCGTTCAACCCGGGTCCGTTTAACATGAAGGAGCACGTTCTGATAACTATATTCGCCAATGCCGGAAGC GCATTCGGATCCGGGTCGCCGTATGCGGTGGGGATTGTGAATATAATAAAAGCATTTTATGGACGCAGTATCTCCTTTCA TGCTGCTTGGCTTCTCATCATTACCACTCAGGTACTAGGATATGGATGGGCAGGGTTGCTGAGGAAGTACGTGGTGGAAC CAGCCCATATGTGGTGGCCCAGCACTCTCGTCCAGGTCTCTCTTTTCCGAGCATTGCACGAGAAAGAAGACCGCAAACTC TCAAGAGCAAAGTTTTTCACCATTGCACTAGTTTGCAGCTTCTCATGGTACGTGATCCCTGGATACTTCTTTACAACGCT AACAAGCATCTCATGGGTCTGTTGGGTCTTCTCCAAATCAGTCACAGCTCAACAACTCGGTTCAGGTTTGAGAGGTTTGG GACTCGGAGCAATCACACTGGACTGGACTGCTGTTGCTTCATTCTTGTTCAGTCCTCTTGTCTCACCATTCTTTGCCATT GTCAATGTTTTTGTGGGATATGTAGTCATAGTCTATGCTGTGATTCCTATTGCATATTGGGGTTTGAATGTGTATCAAGC AGATAGGTTTCCTATTTTCTCCTCACACTTGTTTACCTCTGAAGGTCAAAAGTATAATATATCTAATATTGTCAATGACA AGTTTGAGTTGGATGTTGAAAAGTATACCCAGCAAGGTAGAATTCATCTCAGTGTGTTTTTCTCTCTTACTTATGGGTTT GGATTTGCCACCATAGCTTCCACTCTTACTCATGTTGCCTGCTTCTATGGAAGGGAGATTATGGAGCGCTACCGTGCTTC TTCCAAAGGAAGAGAAGATATCCACACAAAATTGATGAAAAGATACGAAGACATACCTTCTTGGTGGTTTTATGCATTGC TGGTTGCGACGCTTGCAATTTCTCTTGTGCTATGCATCTTTCTAAATGACCAGATTCAGATGCCATGGTGGGGACTTCTC TTTGCTGGAGCACTAGCTTTTGTGTTTACCCTCCCCATTAGCATCATAACAGCCACCACAAACCAGACACCCGGATTGAA TATCATCACGGAGTATGTCTTCGGTCTAATATACCCTGGAAGACCAATAGCAAATGTATGCTTCAAAACCTATGGTTACA TCAGCATGGCGCAGGCTGTCTCCTTCCTCAGTGATTTCAAGCTTGGACACTACATGAAAATCCCTCCAAGATCAATGTTC TTAGTTCAGTTCATAGGCACAGTGCTTGCTGGAACGATCAATATTGGGGTAGCATGGTGGTTACTGAATTCTATTGATAA TATATGTCACGACGAAATCCTTCCCCCAGGAAGTCCCTGGACATGTCCTGGTGATCGCGTGTTCTTTGATGCATCAGTCA TTTGGGGACTGGTAGGACCATTGAAGATCTTTGGTTCTCAAGGAAACTACCATGCAATGAACTGGTTTTTCCTTGGAGGT GCAATAGGCCCTATACTTGTTTGGTTACTGCACAAAGCATTTCCTAAACAATCATGGATTCCCTTAATCAACCTTCCAGT TCTGCTAGGAGCAACTGGAATGATGCCACCAGCAACACCATTGAACTACAATTCATGGATTTTCGTCGGAACAATTTTCA ACTTCTTCATCTTCCGTTACAGGAAGAAGTGGTGGCAGAGGTACAACTATGTTCTGTCAGCAGCACTGGATACTGGGGTG GCTTTTATGACTATTTTGTTGTACTTTTCACTGGGATTGGAAAACAAGAGTATTACTTGGTGGGGAACTGATGGTGAACA TTGTCCACTGGCATCTTGCCCAACAGCAAAGGGCATAAGGGTTGGTGATTGCCCAGTAAACTTGTGA 

Protein sequence (LotjaGi6g1v0347800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKLIIPLNHDPAQVKSSKIECNEKQLNQETTMNSDTEKQTTAATDVDIDEDELSPVEEVRLTVTNTDDPTQPVWTFRMWF LGLLSCSLLSFLNQFFAYRTEPLIITLITVQVATLPMGHFMATVLPKTKFRVGSKVLSFNPGPFNMKEHVLITIFANAGS AFGSGSPYAVGIVNIIKAFYGRSISFHAAWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQVSLFRALHEKEDRKL SRAKFFTIALVCSFSWYVIPGYFFTTLTSISWVCWVFSKSVTAQQLGSGLRGLGLGAITLDWTAVASFLFSPLVSPFFAI VNVFVGYVVIVYAVIPIAYWGLNVYQADRFPIFSSHLFTSEGQKYNISNIVNDKFELDVEKYTQQGRIHLSVFFSLTYGF GFATIASTLTHVACFYGREIMERYRASSKGREDIHTKLMKRYEDIPSWWFYALLVATLAISLVLCIFLNDQIQMPWWGLL FAGALAFVFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMF LVQFIGTVLAGTINIGVAWWLLNSIDNICHDEILPPGSPWTCPGDRVFFDASVIWGLVGPLKIFGSQGNYHAMNWFFLGG AIGPILVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATPLNYNSWIFVGTIFNFFIFRYRKKWWQRYNYVLSAALDTGV AFMTILLYFSLGLENKSITWWGTDGEHCPLASCPTAKGIRVGDCPVNL 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 77 77 -
PANTHER 35 766 732 0.0
PANTHER 35 766 732 0.0
TIGRFAM 53 735 683 9.1E-187
TIGRFAM 57 733 677 1.4E-199
TMHMM 74 96 23 -
Pfam 74 730 657 7.9E-177
Phobius 78 97 20 -
Phobius 98 102 5 -
Phobius 103 125 23 -
TMHMM 103 125 23 -
Phobius 126 183 58 -
TMHMM 150 172 23 -
Phobius 184 204 21 -
TMHMM 185 207 23 -
Phobius 205 215 11 -
Phobius 216 233 18 -
Phobius 234 244 11 -
Phobius 245 278 34 -
TMHMM 254 276 23 -
Phobius 279 289 11 -
TMHMM 288 310 23 -
Phobius 290 310 21 -
Phobius 311 316 6 -
Phobius 317 342 26 -
TMHMM 320 342 23 -
Phobius 343 391 49 -
TMHMM 390 412 23 -
Phobius 392 416 25 -
Phobius 417 447 31 -
TMHMM 447 469 23 -
Phobius 448 469 22 -
Phobius 470 474 5 -
Phobius 475 496 22 -
TMHMM 476 498 23 -
Phobius 497 559 63 -
TMHMM 560 582 23 -
Phobius 560 582 23 -
Phobius 583 631 49 -
TMHMM 632 651 20 -
Phobius 632 651 20 -
Phobius 652 657 6 -
Phobius 658 675 18 -
TMHMM 676 698 23 -
Phobius 676 680 5 -
Phobius 681 698 18 -
Phobius 699 709 11 -
Phobius 710 731 22 -
TMHMM 710 732 23 -
Phobius 732 768 37 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0347800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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