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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0350900 |
| Transcript ID | LotjaGi6g1v0350900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dicarboxylate transporter 2.1, chloroplastic; TAIR: AT5G64290.1 dicarboxylate transport 2.1; Swiss-Prot: sp|Q9FMF7|DIT21_ARATH Dicarboxylate transporter 2.1, chloroplastic; TrEMBL-Plants: tr|G7IPL2|G7IPL2_MEDTR 2-oxoglutarate/malate translocator; Found in the gene: LotjaGi6g1v0350900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66291659..66294792) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGAGCTTTGCACTCCACTCGCTCTCCACTTCACCCTCCTTCTCTCACTCTTCCTCACTCCGTCATCGTCCTCGCTC TTCAATCACCAGATCCCATCTCTCCCTTCTTCCATTCAATCCCAATTTCTCAACCCCATTTCTCAAATCACACAAACCTT CCACCTTCAAACCCCATTTCTCAAAACCCCATTTCTCATCATCATCAATTCAAGCTTCTTCTTCTTCGTCTACTCCATCA CCACCACCACCACCGCCGCCACCTGTTGTTGTTCAGGGTGCAAAACCCATTCCCTTTGTAATCTCCGTCGGCATAGGCCT CATTTTGCGGTTTCTGGTTCCCAAACCAGTGGAAGTCACTCCTCAGGCATGGCAATTGCTCTCGATTTTCATGTCGACAA TCGCGGGTTTGGTCCTGAGTCCGTTGCCGGTGGGGGCGTGGGCTTTTCTGGGCTTGACAACCGCCGTCGTGACGAAAACT CTGACGTTCACGGCGGCGTTCAGCGCCTTCACGAACGAGGTGATTTGGTTGATCGTGATCTCGTTCTTCTTTGCTCGTGG GTTTGTGAAGACAGGGTTGGGGGATAGGATTGCTACTTACTTTGTGAAGTGGATGGGGAAGAGCACTCTGGGGTTGTCTT ATGGTTTGACATTCAGTGAGGTGCTGATTGCTCCGGCAATGCCTAGCACCACTGCTAGAGCCGGTGGTGTCTTCTTGCCG ATTATCAAGTCACTTTCACTCTCCGCTGGGAGTGAACCCAATAGTCCTACATCGAAGAGGCTGGGGGCTTTTCTCGTTCA GAATCAATTTCAGGTTTGTTTTTCCCTTGTTGCTTTTCACCATGATCCAATATATGTGATATATTATATATGATGTGATG TGATAGGTTGAAGGAGATACAGAGAAAATGAGGTGAGGTGTATGTATTGTTTGAGTGTTGATGTTTGAAATTCAGAATTG GTTTATGATGGATACTAAATCCTACAATTATTACTAGTTAGAGGAAAGAAATTGTATGATGTGATTATATAATAAACATG GCTTTGTCAGTTATCTTGCTCATGAATAAAAAATTAAAATTGAAAGGAACATAAAGCACATAAATAAGGGGTAACTTGTA GAGGTAAGAAAGTGTGATTTGAATGCAGTAACTTATGTTAACTTTGTTCTATGCTACTAAATGAGTATATTGGTTGTATT CTGGGAAGTTCTCTGACAGAAAATTTTAGAGCATTGAGTTCTTCTGGTCTGCTGATTGTCTAGATATTAATGTGAGGAAA ATCATTAATTCATTATGCAGTTTCGTGTTGGACCAGTTAATCATTGGGGATAGATTTCATAAGATTTATAGGTTATTTTC AAACTTCACTTTTGTGAAATACTAGAGATCCGCCTTGTTGTTTTCTCTTTTAATTCTCTTGGTTTTGTTTAGTTTAATGA GACATGAAGGTATTGGTATTATATATGTATACTAGTTATAATTATTTGTTATCAGCAATGATCATCATAAATTCTGATGT TACTAAATTCTCTTATTTGCAAATTTTGCTATGATGTTGAAAATGAAGTGACTTGTGCATTCTTTGATCTGTGACAGTCT GCTGGTAACTCCAGCGCTCTTTTCCTAACAGCTGCAGCCCAAAATCTGCTGTGTATGAAATTAGCAGAGGAGCTCGGGGT GATAGTTTCAAACCCTTGGGTTACTTGGTTTAAGGCAGCTAGTTTGCCTGCATTCGTTTGCCTTCTTGCTACACCATTGA TTTTATACAAAATCTACCCCCCTGAACTCAAAGACACACCAGAGGCACCTGCCCTGGCTGCAAAGAAACTGGAAAGTATG GGGCCTGTCACTCAAAATGAATGGATTATGGTTGCGACAATGCTTCTTGCGGTCTCTTTGTGGATCTTTGGGTATGTCAT ATGCCTTCTATTATATCTACATCCATGCATATGGATGAATAGTTTCTTGATTGATTTATTAGTTTTTTGACTTTCTGGCT GGAGCATATGATCCCATAGAGATGCTGAAAATAGATTTTTGAATGAAGAATGTGTCATTAAATATACTTTCTAGTTTTTG TCAATGTTTTAGAATATGTTAGGGTTACGTTTTTCGACTTTGAAAAATACGAAGGAGGTGAGTTCCTTCCACAACAATGA CCTTGAAAAGTGTGTTTCTCTTTTATTTCCGTTTAATGACTCTCGAAACACATGAGGTTGTTAAGTGTGTTTGTACACCA GTTGAGTACAATGTGAACGGACTTTCTTCTCAATCCACAATGAGTTCTGTTCAATTTTTATCTTGAAGTGCATGCTAACA TCCGTTTACACTTGTGCCAACGTATATCTAAATATAGCCTAAACCATACACACACTTTCTTCTCAATCCACAAGATGACA GTGAAGGAGTTCACTTGTAATTTATGTAGTTTGTTGTTGTTCTTACAATGTAGTTTCTTCAAATTAAATTCAATACTCAG TATGTTTCTGGTCTTGCAGAGAGACAATCGGCATAGCAAGTGCTGTAGCTGCAATGATTGGTTTGTCAATACTCATTGTA TTAGGAGTCCTTGACTGGAGTGACTGCTTGAATGAAAAATCGGCATGGGATACCTTGGCTTGGTTCGCCATTCTAGTAGG TATGGCAAGCCAGTTGACAAACCTTGGTATTGTGAGCTGGATGTCCGATTGCGTGGCAACAACCCTTCAGTCTTTCTCTT TGAGCTGGCCAGCTGCACTAGTTGTTCTTCAGGCAGCTTATTTCTTCATCCACTACCTTTTTGCAAGTCAGACTGGACAT GTGGGGGCTTTATACGCCGCATTTCTTGCCATGCATAGGGCAGCTGGTGTTCCTGGTGTTCTGGCAGCACTTGCTTTAGG TTACAATACAAATCTTTTTGGCGCAATAACACACTACAGTAGTGGTCAAGCTGCTGTATACTATGGAGGTTTGTCCTTCT CTATGATGTCACTTAATTTATGTGTTTTCTGTTTTTCCTTCCAACTATATAGTCATCTAAGTTGTGCTTGTTCAGGAACT TTGTTGAATTCACTATGTTTGCAATGCATGATATTTGTCCTTCCCTTAAACTAATCCCAATTTTATTTGGTTCTGGTGCT TCATTTCTCTCTTC
CDS sequence (LotjaGi6g1v0350900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGCTTTGCACTCCACTCGCTCTCCACTTCACCCTCCTTCTCTCACTCTTCCTCACTCCGTCATCGTCCTCGCTC TTCAATCACCAGATCCCATCTCTCCCTTCTTCCATTCAATCCCAATTTCTCAACCCCATTTCTCAAATCACACAAACCTT CCACCTTCAAACCCCATTTCTCAAAACCCCATTTCTCATCATCATCAATTCAAGCTTCTTCTTCTTCGTCTACTCCATCA CCACCACCACCACCGCCGCCACCTGTTGTTGTTCAGGGTGCAAAACCCATTCCCTTTGTAATCTCCGTCGGCATAGGCCT CATTTTGCGGTTTCTGGTTCCCAAACCAGTGGAAGTCACTCCTCAGGCATGGCAATTGCTCTCGATTTTCATGTCGACAA TCGCGGGTTTGGTCCTGAGTCCGTTGCCGGTGGGGGCGTGGGCTTTTCTGGGCTTGACAACCGCCGTCGTGACGAAAACT CTGACGTTCACGGCGGCGTTCAGCGCCTTCACGAACGAGGTGATTTGGTTGATCGTGATCTCGTTCTTCTTTGCTCGTGG GTTTGTGAAGACAGGGTTGGGGGATAGGATTGCTACTTACTTTGTGAAGTGGATGGGGAAGAGCACTCTGGGGTTGTCTT ATGGTTTGACATTCAGTGAGGTGCTGATTGCTCCGGCAATGCCTAGCACCACTGCTAGAGCCGGTGGTGTCTTCTTGCCG ATTATCAAGTCACTTTCACTCTCCGCTGGGAGTGAACCCAATAGTCCTACATCGAAGAGGCTGGGGGCTTTTCTCGTTCA GAATCAATTTCAGTCTGCTGGTAACTCCAGCGCTCTTTTCCTAACAGCTGCAGCCCAAAATCTGCTGTGTATGAAATTAG CAGAGGAGCTCGGGGTGATAGTTTCAAACCCTTGGGTTACTTGGTTTAAGGCAGCTAGTTTGCCTGCATTCGTTTGCCTT CTTGCTACACCATTGATTTTATACAAAATCTACCCCCCTGAACTCAAAGACACACCAGAGGCACCTGCCCTGGCTGCAAA GAAACTGGAAAGTATGGGGCCTGTCACTCAAAATGAATGGATTATGGTTGCGACAATGCTTCTTGCGGTCTCTTTGTGGA TCTTTGGAGAGACAATCGGCATAGCAAGTGCTGTAGCTGCAATGATTGGTTTGTCAATACTCATTGTATTAGGAGTCCTT GACTGGAGTGACTGCTTGAATGAAAAATCGGCATGGGATACCTTGGCTTGGTTCGCCATTCTAGTAGGTATGGCAAGCCA GTTGACAAACCTTGGTATTGTGAGCTGGATGTCCGATTGCGTGGCAACAACCCTTCAGTCTTTCTCTTTGAGCTGGCCAG CTGCACTAGTTGTTCTTCAGGCAGCTTATTTCTTCATCCACTACCTTTTTGCAAGTCAGACTGGACATGTGGGGGCTTTA TACGCCGCATTTCTTGCCATGCATAGGGCAGCTGGTGTTCCTGGTGTTCTGGCAGCACTTGCTTTAGGTTACAATACAAA TCTTTTTGGCGCAATAACACACTACAGTAGTGGTCAAGCTGCTGTATACTATGGAGGAACTTTGTTGAATTCACTATGTT TGCAATGCATGATATTTGTCCTTCCCTTAAACTAA
Protein sequence (LotjaGi6g1v0350900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESFALHSLSTSPSFSHSSSLRHRPRSSITRSHLSLLPFNPNFSTPFLKSHKPSTFKPHFSKPHFSSSSIQASSSSSTPS PPPPPPPPVVVQGAKPIPFVISVGIGLILRFLVPKPVEVTPQAWQLLSIFMSTIAGLVLSPLPVGAWAFLGLTTAVVTKT LTFTAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEVLIAPAMPSTTARAGGVFLP IIKSLSLSAGSEPNSPTSKRLGAFLVQNQFQSAGNSSALFLTAAAQNLLCMKLAEELGVIVSNPWVTWFKAASLPAFVCL LATPLILYKIYPPELKDTPEAPALAAKKLESMGPVTQNEWIMVATMLLAVSLWIFGETIGIASAVAAMIGLSILIVLGVL DWSDCLNEKSAWDTLAWFAILVGMASQLTNLGIVSWMSDCVATTLQSFSLSWPAALVVLQAAYFFIHYLFASQTGHVGAL YAAFLAMHRAAGVPGVLAALALGYNTNLFGAITHYSSGQAAVYYGGTLLNSLCLQCMIFVLPLN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 528 | 528 | 2.7E-278 | ||
| MobiDBLite | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 95 | 95 | - | – | |
| PANTHER | 1 | 528 | 528 | 2.7E-278 | – | |
| MobiDBLite | 62 | 76 | 15 | - | – | |
| MobiDBLite | 62 | 88 | 27 | - | – | |
| TMHMM | 96 | 113 | 18 | - | – | |
| Phobius | 96 | 113 | 18 | - | – | |
| Pfam | 105 | 530 | 426 | 2.4E-116 | ||
| Phobius | 114 | 124 | 11 | - | – | |
| TIGRFAM | 115 | 526 | 412 | 2.3E-103 | ||
| Phobius | 125 | 150 | 26 | - | – | |
| TMHMM | 126 | 148 | 23 | - | – | |
| Phobius | 151 | 169 | 19 | - | – | |
| TMHMM | 163 | 185 | 23 | - | – | |
| Phobius | 170 | 189 | 20 | - | – | |
| Phobius | 190 | 209 | 20 | - | – | |
| Phobius | 210 | 227 | 18 | - | – | |
| Phobius | 228 | 304 | 77 | - | – | |
| Phobius | 305 | 328 | 24 | - | – | |
| TMHMM | 306 | 328 | 23 | - | – | |
| Phobius | 329 | 357 | 29 | - | – | |
| Phobius | 358 | 375 | 18 | - | – | |
| TMHMM | 359 | 376 | 18 | - | – | |
| Phobius | 376 | 380 | 5 | - | – | |
| TMHMM | 378 | 400 | 23 | - | – | |
| Phobius | 381 | 403 | 23 | - | – | |
| Phobius | 404 | 414 | 11 | - | – | |
| TMHMM | 415 | 437 | 23 | - | – | |
| Phobius | 415 | 438 | 24 | - | – | |
| Phobius | 439 | 449 | 11 | - | – | |
| TMHMM | 449 | 471 | 23 | - | – | |
| Phobius | 450 | 471 | 22 | - | – | |
| Phobius | 472 | 477 | 6 | - | – | |
| Phobius | 478 | 502 | 25 | - | – | |
| TMHMM | 486 | 508 | 23 | - | – | |
| Phobius | 503 | 521 | 19 | - | – | |
| TMHMM | 521 | 543 | 23 | - | – | |
| Phobius | 522 | 543 | 22 | - | – | |
| Phobius | 544 | 544 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0350900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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