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LotjaGi6g1v0352500.1

Overview

Field Value
Gene ID LotjaGi6g1v0352500
Transcript ID LotjaGi6g1v0352500.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Phosphatase 2C family protein; TAIR: AT1G34750.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9S9Z7|P2C10_ARATH Probable protein phosphatase 2C 10; TrEMBL-Plants: tr|I1KUC9|I1KUC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0352500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:66456195..66461257) extracted from Lotus japonicus Gifu genome v1.2.

AAGCAAGCTTAAAAGAAGCATAAGTTTTGAAAAATACTACTAATATTGTTTTCTTATCCCTTTGGGTTAATAGCTCTATT TAAGAAGGGGGTTTTAGAGTTGCAAGAAACAGAGCGTTTGCTTGTGAGGTTAAGAAAGTTTTGCTGACTTTTGAAGTCTC ACCTCACAAACTATGAAACCTCAAAACAGCTGTTGTTGTAATTAAAGAAAGTGTGTCAGTCAGCAATAAAACAAGAATGA ATACAAAACTGCTGCAAAGTCAATAAGGGCAACCTCTGCCTTTTGGCTTCCATTTGCAAACAAGACTTTCTCAGCATAAA CCAGACGGTCACATTCCATTCATCACCTCTTTCTTGTATTCCCTTCCTATTGTTTGGTTTTCTATTAATAATAACAATAA GCTCTTTCTATCACAAGGGGCGTTTTTATTTTCAGTGTCTGGTTTGTCTCTTTCTCTTCGTTTCCGGCAGAGGACGGCAC AATCGGTGACCACCCACTTCCCTCATAGATCTTCCCTCTCATCCTCTTGGGAAAAGTTGAGATTTTTGGATTGGTTAGTG AATTTCTCACCAAGTTAATCATCTGGGGTGGTTGGAATTTTTTATTTTTTATTTTTTTCAACCTTTTTTCTTGTTCTGAA TGTTGGAATTCTTTGCTTGTTTGATCTGCTGATAAATTCACAGTTCTTGGAAAGTTGTGGAATTTCTCTGATGTTAAGTT TTTTATGAAATTTTCAGTTTTGAACACTTGCAGAAGAGTTGATGTTAAGTGATAGAAAGGGTGAGGTGGGCTGAATAATA TGGATTCTCTTTGTTGCTTCAACTCTGCCAATCAGGTTTGAATTTCTGGACTTTATCTATATATATTCTTTTGTATCTCC ATGCATATACAATTCCTTGACTTTTGATGGAGTGTTAGACTTTGGAATTCTGGTAATCTGGTGGTGCAGTGGATGGCTTA GGACTGTCCCCAATTGTGCTTTTCTAAACCTACTTGATTGTGAAAATTGAAACATAGGGATTATCTGTGCTTTTATGGCT ATCATTAACCTCAGAACAGTGGAAGATACTAGACTGAGGGTAAAATGAGTTTGGTACTTCAATATTTTGAAGGTAGTTTG AGCATTCAACATTATTCTTTCTCTCTATAAGTGTGTGTTTTGGAAACCTGTTGAGTGCAACGGATTTTCATCCAAGTCTT TAAAAAGAGTTTCGTTAACTTTATGTCTCGAAGTGAATGCTAACGTCCTTTTGCAATAATGCTAACGAGTATTCAAACAT AATCTGAGTTAATTTTGTCTGATAAGGCTCATATCAAATGGCTGCTTTAAACACTAAAGCTGCCTAATTAATCTGCTAAT GACCCTTGGATGTTTCATGAGTTGCTTCCGGTCTACTGTTCAGCTATGTTTTACTTATATCCCCATTGAATGCCTTAGTT TTATTGTAAGTGTACATTATTCTGGTATGGTGCCATTTTAAGTTTGAGGCTTCTTAACTATATGGAACTATCAAGTACAT AGTATGTTTGCGTTTTATTTCTGAGTGTGGTATGCACGGGAAGAGTTCCGTTCACTTTATGTCTCGAATGGAGTGCTAAC ACCTGTTTGCGCTGTTGCTAACATATATCCAAACATAGTTCCATTCCCTTGCTCTGCACTTATGTTACATGCCCTTTGGT AATCAGCCATGTACTTTCTTCTCTCCCATTTCTTAAGATTTCTTGTACTTATATGTCAAACAGTCGATTCTTTTGTTACT GTATTTTAACTTCCATCATTTCAGGCGGGTGGAGGACGTTCGTCATCTAGCTCTGGGAAGGGCAAAAGCTATCTGTGCCC TGTTAAGTATGGCTTTAGCCTAGTTAAAGGTAGGGCAAACCACCCAATGGAGGATTTTCACGTTGCAAAAATCATCCAGA ACAAAGGGCAAGAGTTAGGACTTTTTGCTATATATGATGGACACTTAGGGGACAGTGTGCCCGCCTATTTACAGAAGCAT CTCTTTTCCAATATCTTGAAGGAAGTAAGTTCTTGAAACAAACTTCAACATGTCATGTATTTATTATTACCTCAATCACA TTCAATTCCCTGAAAAAAGTTCCTCCATTTTTTTTCTATTATATGTTGCATATAGTATGAAGAGTGAATACTTAGTTTTT GTTCCCAGCTTCCCATACTTTGTTTTTTCATGATCCTAACTGCATGATATTTGCGGATGGTATGGTTCTATTTGAAGAAT TAAGGGAAATGTTAATTCTAAACTTGAGATTTGGAGAAAAACTTTGGAATCTAAGGGTTTTCGCTTAAGCATGAGCAAGG CAGAGTATATACATTTCAGTAAGACAAATGTTGGAAATAAAAATTGATTATGTTTAACCCAGAAACTACTATCTCTAACT TCTAGCAGAGATAGTACCCCAAAATGACTCCAAAACATCTATATTGTCCTCCAAAATTGATTTTACTCTGCCTAATTGAT TCTAAGCTTCCCCAATGGGAAACCAAACACACAGTTTGAATCTTTATAATGCCTTTTGATGGAAATTGCATCTTAAATTA TGAGTGGTTGTTCTAGGAGGATTTCTGGACTGATACAAACAGTTCCATCATTAAAGCTTATGAGACAACAGATGAGGCCA TTCTTTCTCACAGTTCTGATTTGGGGGTAGGAGGATCAACTGCAGTTACTGCCATCCTTTTAAATAATCAGAAGTTATGG GTAGCAAATGTTGGAGATTCACGAGCAGTTCTGTCTAGGAGAGGGGAGGCCATACAAATGACAATTGATCATGAGCCCAA TACTGAAAGGGGCATCATCGAAAACAAAGGCGGCTTTGTCTCAAACATGCCAGGTTCTTTTATAAGCCTTAATCAGTTAA TGTCTATCACTCTATTGAGATATTGCTTACATGTCCAATGCTGGATTTTCTTGCCATCCTATGTGATATCGAGAATGTCA AGTGCTTGGGGGAAGGGTGTTTATGAATTATGAGTCTCATTTGCATTTTCAAAGAGGGAGGGAAAAGGAGACTCATCTCA CTTTGTTTAAAGAAATGGTTTGCTAACATCAAGTTGGAGGCTTATGCTAAGTTAACCTTTCTTTATTGGTCGAAATTTGC GCGTGTCTTAGTTGAAATTAATTCTTTATACCCCTTGTTGTACATAGGGCATGCATATGATAACTACCACTTATTTATAA CAAGCTTGAAAGTAAAATTGCCATCTCTCTGCTTGGTTTAGGTTTTTCAGAAAAGTGAAGGATAGGTTCATTGAAAGCTA TACATTTTTTTTATTCTTCCAAAATACTTTTGCGTGTCCTCTGCAATAGCAAGATCTTCTAACAGAATTCAGAACTTAAT TTGACAAGTTTGATAACTTGTATGGTATCTAGGCTGGCACATAGTCTTATGTCTCTTATGGAGATTAATCATGCTAAAGT GTTTAACACTTCTGGCTATTTAGTGTTTAAAATCTTTTAACTTAATTTTAACTTCAGAGTCTGCCACCAGCCCTTTTAGT CCCTCTCCATATGTGATGGTGATGAATTTGTAATTTCAGAGCCTGTCACTACTACATTTGTAATTATATAATGCTTGTAA TCAACCAATCACTTTGATATAGATTGTTCAGAAACATTTTCTAAAATATCTAATTATCTTTGGAAGTCATGGACCAAATG GGAATCCATTTTTCACCAATTTTTAACCATTTTTAAAATGCTATCAGTGGGATATGCTACTTATTTTGAGTACCTATTGC CTCATGATTCCTAATTAGTGATTACCATATGCAAGTGTCATCATCACATACACTAACATAAGTGCTGTAACTTTCTATGC CTAAGGTAAGGTTTAACCGTTTAAGCAACAATTCAATTAGCCATAGCTTCCTATGCTAGGATAAGGTTTACATAGCTGGT AGATACTCAACATCAAAACTAAGTTTGGCAAAATTTAATGTGAGTCATTGTGTATTTTGTGATACTTTTTAATTTGTGGA TGTGTTTATATCAGGAGATGTTGCGAGAGTGAATGGGCAGCTTGCTGTTTCACGGGCATTTGGAGACAAAAACCTAAAGT CACATTTGAGATCCGATCCCGACATTCGTCACGACGAAATTGACTCAGATACTGAGTTTTTGATACTTGCTAGTGATGGT CTATGGAAGGTTTATCCCTGAATCCAACTTTCTGTCCATTATTTCTTACAAATATTTATTTTGCATTGAAATTCCACTCA TTGGTTCATTCCATTCCAGGTAATGGCAAACCAAGAGGCAGTTGATATTGCAAAAAAGATCAAAGATCCACAAAAGGCAG CAAAACAATTAACTGCCGAGGCATTGAACAGAGAGAGTAAAGATGATATTTCCTGCATTGTGGTTCGTTTCAAGTGATTG TGATATAGGGAACATAAAGTATTCAATCTATGATTGCTTCCAATATAGGGACAGAAGTCCTTACTCTACAATTTGTTTGG AGATCTCATGAAATTCGTTCAGTTTGGAATTTTCTACTGCATAGGTTTCGAAATTGAAGTTCTTCAATTTAGGTGGTGCC ATTTAGTATTTCTTGATTGCTTCTGTGTAGATTAATAACATCAAATTTCTTTGTAATTTGCATTATGACATGACATGGGA ATTATGCATTCTATGGTATACATGAGTGGCCTTGTTTGAATGTCTTATATATTGTTCTATAAGTTTATTTATATTAGTAC TATTCCCGTCCTTAATCTGGAAGGGTAACAACGTTTTAAGGTTGTTTGGTTTGACTCATAATCACTTATGGGAAGAAGAT ATAAAATGTAGTGTTTGGAGTTTTGTGGTTTAGATTTTGTGTCATCAACCATTCTAAATGTACCATAGAGCAAAGCCTAT AGCAATAAAGTCTAATGGGAAAAGGCTTTGGTGCAATAACAACAATCTAACTTTTTTTTTTAATTCAATGTAGTAAGCTG CATTAAATAATATCATGTAATGAATCCATTTTAACTTTTCGATGCCAGATCATATAAAAGTGTGTTCGGTTTAATGTTAG AAAGCATAAAATAATTTATCCCA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0352500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATTCTCTTTGTTGCTTCAACTCTGCCAATCAGGCGGGTGGAGGACGTTCGTCATCTAGCTCTGGGAAGGGCAAAAG CTATCTGTGCCCTGTTAAGTATGGCTTTAGCCTAGTTAAAGGTAGGGCAAACCACCCAATGGAGGATTTTCACGTTGCAA AAATCATCCAGAACAAAGGGCAAGAGTTAGGACTTTTTGCTATATATGATGGACACTTAGGGGACAGTGTGCCCGCCTAT TTACAGAAGCATCTCTTTTCCAATATCTTGAAGGAAGAGGATTTCTGGACTGATACAAACAGTTCCATCATTAAAGCTTA TGAGACAACAGATGAGGCCATTCTTTCTCACAGTTCTGATTTGGGGGTAGGAGGATCAACTGCAGTTACTGCCATCCTTT TAAATAATCAGAAGTTATGGGTAGCAAATGTTGGAGATTCACGAGCAGTTCTGTCTAGGAGAGGGGAGGCCATACAAATG ACAATTGATCATGAGCCCAATACTGAAAGGGGCATCATCGAAAACAAAGGCGGCTTTGTCTCAAACATGCCAGGAGATGT TGCGAGAGTGAATGGGCAGCTTGCTGTTTCACGGGCATTTGGAGACAAAAACCTAAAGTCACATTTGAGATCCGATCCCG ACATTCGTCACGACGAAATTGACTCAGATACTGAGTTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAAC CAAGAGGCAGTTGATATTGCAAAAAAGATCAAAGATCCACAAAAGGCAGCAAAACAATTAACTGCCGAGGCATTGAACAG AGAGAGTAAAGATGATATTTCCTGCATTGTGGTTCGTTTCAAGTGA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0352500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDSLCCFNSANQAGGGRSSSSSGKGKSYLCPVKYGFSLVKGRANHPMEDFHVAKIIQNKGQELGLFAIYDGHLGDSVPAY LQKHLFSNILKEEDFWTDTNSSIIKAYETTDEAILSHSSDLGVGGSTAVTAILLNNQKLWVANVGDSRAVLSRRGEAIQM TIDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDIRHDEIDSDTEFLILASDGLWKVMAN QEAVDIAKKIKDPQKAAKQLTAEALNRESKDDISCIVVRFK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF648
10 280 271 1.2E-147 –
PANTHER
PTHR13832
10 280 271 1.2E-147
IPR015655
Gene3D
G3DSA:3.60.40.10
17 281 265 1.3E-75
IPR036457
SUPERFAMILY
SSF81606
27 281 255 3.53E-69
IPR036457
SMART
SM00332
29 278 250 6.8E-82
IPR001932
CDD
cd00143
32 280 249 1.60696E-88
IPR001932
ProSiteProfiles
PS51746
33 280 248 50.997
IPR001932
Pfam
PF00481
42 273 232 9.4E-58
IPR001932

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0352500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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