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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0356700 |
| Transcript ID | LotjaGi6g1v0356700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT1G25270.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q4PT23|WTR6_ARATH WAT1-related protein At1g25270; TrEMBL-Plants: tr|G7IL80|G7IL80_MEDTR WAT1-related protein; Found in the gene: LotjaGi6g1v0356700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66811516..66815767) extracted from Lotus japonicus Gifu genome v1.2.
TGGAGTTGTTTAGTTAAGGAGTAGAAGAGGTGCCGAAGGGAATTAAGGGGAGAACTCAGGAAAGTGATGAGTGAGTGAGA TCGATTCATTCAAATTCAATTCATGCAAAGAGGCTATGATGAGAATGACCCACGAAGACCCAATTCGCACGTGTCAAATA GGAATTGAAAGCATGTGGTATTGACAGTTCCAACGTAGAGGGATGACGTGGGAGAACAACCAAACACTGCCGCTTTAATT TCACCTTTGGAAATCTGCATTCCTCATTTCCTCATACATAAATATCCCTCCTTCACTCCTTCCCTTTTCTCCTTAACAAG ACCCTTCATTTCTCTACCTCTTCTTTAAAATTTATAACACTGTCTCAATTGATTTTTATTTTATTTTTATATATAACCTT TTGGATACTACCAACTAGTACTAATTAAACTAGAGATCGATGATGAAGGGTATATGCAATGTAGTGCAAGGTTTGAAGCC TGCGTTGTTGATGGTGTTGGTGCAGATAGCATTTGCTGGTGTCAATGTTCTCTACAAGCTTGCCGTTAACAATGGCATGA GTTTGAGGGTGGTTGTTGCCTACCGCTTTATCTTCGCAACTGCTTTCATAGCTCCTCTTGCTTTCATTCTTGAAAGGTTA ATTATTCCATTCCTTCATTGATTAATCTCATGATATTTAAGATGATTTTGTGATTAATGAAGGATGATTTGTTTTGCTTT TGAATGTTAATTGGTGCTGCTATTCATATGCATTTAAATTAATTGCTAGTACTAGAGAAAATTAAAGTGGAAAATTATAT TATTGAAGCTATGGCAAAAACAATTGATAGTAATAGTGAAACTCACTTGAAGATTGAGCTAGCTAGAATCTGAACTGAAA TTATTTTTATTGGCAGGAAGAAGAGGACAAAGATGACTTGGACAATACTGTTTCAATCATTTCTCTGCGGTTTGTTTGGG TATGTTATTAACGTCACCATGTATATTAAATGAAGTGTCAATTTTTTGTAACATGTGGTGGTCACTTATGCTGTCCACAT AGTTTCTCCTAATTAAGCATGCAAGCTTTTCTCTTTCTAGACCATTTCGTTTGTAATTGTTGTTAGCTATATGAACGTGA TCTTTCTGGAGTTTCAACATCAAAAACCATTTTTGTCTCGATGTTTCTTAAGTCGCGGCAAGTTCTCAGGAACTTCGTTT CTCGAGGTCAACAAAACTCTTTCATTAATTGTGAAAAAATAAAACAATAATTTATTGTTCTTATTTTAGAGTTTAATGGA TATGCACTGACAGTGTAAAATAGTTTTACACAGACATCCAATTGAATTCCGCCAAATCAGAAAATATCTTATTCTTTTAA TTAAAATTAAAGTCAAATGTAATTATCTCTCCTATGTGGCATGCTTTGATTGGATGACTGTGTAAAACTATTTTACACTG TCAGTGCATATCCATTAAACTCATTATTTTATTGGTTTTATATATATAACTAGTATTGATTTCGCACTATGCACGGATGG AATAAGAGTACTTTATCAGCATATATCAAACTTTTTCATATTTTCTCTTTCATTTTTCTGTTTTTCATACGTATACACAT ATTTAAGTTTTATTTTTCTAATTCTAGTTAAATTCTAATTCCTTTTTTTTCCTAATTTGTTATGTTTTGAATCTCATGCC AAAATTATTTTAATATTTCATGTATATTCGAAAATCTGAAATAAAATTTTTTTTAGTTAATTTTTAAATCAATCATTTAA AACTATTATATATATCTATATATCAATTTTTTACTTTGTTAAGTAAAAATTAATCATAGTCATTAAAAACTTTTTTTTTC AGCATACGCCCTTATGGTAGAAAAGTCTCAATGACTTTTATTAATTATTCTAATTTCATTAAAAACCATAAAATATCAAA TTAATACTGTAGTTATTTTTGAAAAAGTGACAATTGACTTTTGTTATTTATTTTAATGTTATTAATAACTATTAAAGACC GTATTAATTATTTTCAAAAAAATGAAATTATTTAATATTTAAATCATAAAATATAAAAAAGACATCATCTACCTACTAAT TATATTATGAGAGAGAAAACTTATGTAAATCGACATAGAATGGGGGGTGACATTTGTTTCGAAAATCGTACTATAGGATA GGATTTCAAATTTTGGTTAGCAGCCTAAATTTTAGTGCCTTGATTGGCGAGTTATGATATTTACACATTTCTCCACTATT TTTTCACCTTCATTTTATATCTATTTTTCTTTTCTCTATCAATCAAATCACCTATCACATCTTTACTTTCTCTCTTCTTT CTTCCTATCTCTCTCTTCTTCCAACTCTCCACACTTTAAAAATGAGATGTGAAGTTATAATTATTCTTGATTTTGTGGTA CTCAGAATATTTTGGCTTCGGGAGCATATGTCTTTACATGCACATATTTTAATTGAATAAGTGAACGTTAATATTATATG AAACATTTATGTGAAAATTCATATTGTTATAATTGTGGAAAAAAATAACATTATGTGTAACATTAGAGATCGGTTGTTTC GAATTGATTATATGTTTATTTACTATGTAGAGGATCATTAGCTCAAAACTTCTACTTAGAGGCTTTGGCTTTAACATCAG CGACATTTGCATCGGCCATGTCCAACCTAGTACCAGCCATAACCTTTATCATGGCCGTTTCCTTCGGGTAAGTAAACCTC ACTTCTTTTGTTTCTATTTCTCATTAATTTTCCCCATTTTTCACAATGTAATTTATTTATTTATAATATGTACTCTCAGT TTGGAAAAATTAAATTTGAGAACGGCAGCAGGGAAGGCTAAGATAGTAGGCACATTAACTGGAATTGGCGGGGCAATGGT ACTCACTTTTGTTAAAGGCATTGATATCAAAATGGGTTCCTTTCACATTAACCTTTTACATTATCCTAACGGGGCACAAC ACTCACAAGCTAGCACCACCGGTGGTAAGACTCTCTTGGGTTCCCTATGTGCCCTGGCTAGTGGCATCTCTTATGCACTC TGGCTTATTATTCAGACAAAGATGAGTGAAAAATACCCAACTCATTACTCAAGCACCGCGTTGATGTCATTTTGGGGGTC AATCATATCTGTTGTGTTTGCTCTTTGTGTTGAGAGGGATTGGAGTCAGTGGAGGTTAGGTTGGAATGTTAGGCTTCTAA CGGTTGCTTATTCGGTATGTGTATTAACAGATATCGATTATTAATGGTTAGGTTGGAATGTATTAATCATGAAATTAACT TAATTGATGCATGTAAATCTGCAGGGTATGGTGGTCTCTGGAGCAATGGTGGTTGTGATTTCATGGTGTGTACGGATGAG AGGCCCTTTATTCGTCTCAGTTTTTAGCCCTCTAATGCTAGTCATGGTCGTCATTGCTGGTTCTACCATGTTGAATGAGC AGCTACACCTTGGATGGTATATATAAATTTGAATCGATTCTAATAATTTATATGTAGGAAAAGTGGTTAATTTGATTTGC TTAATGTATTAACATGCAATTTGTGTGTTGATTTCAGCATCATTGGAGCAGTGTTGATTGTTTGTGGCTTATACGCAGTA TTATGGGGGAAAAGCGAAGAGATGAAGAAAAGGAATCAATTAGTGCCGACGACGCAAAGTCCCCACCATGAATCCAATGA TGCAGTGGAAATAGTGGTCAGGTCTGGAGTAGTAGAAGATAAAAGCAATCTTAGTAGCCAAGATAATGGTGTGCAAGTTG TTAGGGATAATGAAGATTCACCAGATGGACAAGATAAAAGTTCACATGCACACAACACAATCAGGGAATACTAGCAGGAG AAGAAGAAAAAATTTCTCATAATTGATGTCTAATACTCAATTAACAGTCTAACTTCTAGTGATATATAGTGATATAGCAC AATGGATAAAACGCCATCATCTTTTTCAAATCGAACAAACATGCTGCTGTTTTTATTTTAAACTTTGAAATACAAACTCG CTAAAAAAACAGAATCTTGAAACAACAATGTGAGTATTGAATTGCAATCGGGTAAATGGTCACATTGGTCCCTGGATGTT CGCACTGACTTCAGAATCGTCCCTGGATGAATTTTATTAGGCTTGCGGTCCCCAGATGTGGAAAAAAATAGTCATATTAG TCCCTAACGTTAAAATCCCCTAACGTCCGTTAACCCAATTAATAAAAGTTAACATTATCTTTCTAATTTTCTTTCACTTT GGTCCCTTTCTT
CDS sequence (LotjaGi6g1v0356700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAAGGGTATATGCAATGTAGTGCAAGGTTTGAAGCCTGCGTTGTTGATGGTGTTGGTGCAGATAGCATTTGCTGG TGTCAATGTTCTCTACAAGCTTGCCGTTAACAATGGCATGAGTTTGAGGGTGGTTGTTGCCTACCGCTTTATCTTCGCAA CTGCTTTCATAGCTCCTCTTGCTTTCATTCTTGAAAGGAAGAAGAGGACAAAGATGACTTGGACAATACTGTTTCAATCA TTTCTCTGCGGTTTGTTTGGAGGATCATTAGCTCAAAACTTCTACTTAGAGGCTTTGGCTTTAACATCAGCGACATTTGC ATCGGCCATGTCCAACCTAGTACCAGCCATAACCTTTATCATGGCCGTTTCCTTCGGTTTGGAAAAATTAAATTTGAGAA CGGCAGCAGGGAAGGCTAAGATAGTAGGCACATTAACTGGAATTGGCGGGGCAATGGTACTCACTTTTGTTAAAGGCATT GATATCAAAATGGGTTCCTTTCACATTAACCTTTTACATTATCCTAACGGGGCACAACACTCACAAGCTAGCACCACCGG TGGTAAGACTCTCTTGGGTTCCCTATGTGCCCTGGCTAGTGGCATCTCTTATGCACTCTGGCTTATTATTCAGACAAAGA TGAGTGAAAAATACCCAACTCATTACTCAAGCACCGCGTTGATGTCATTTTGGGGGTCAATCATATCTGTTGTGTTTGCT CTTTGTGTTGAGAGGGATTGGAGTCAGTGGAGGTTAGGTTGGAATGTTAGGCTTCTAACGGTTGCTTATTCGGGTATGGT GGTCTCTGGAGCAATGGTGGTTGTGATTTCATGGTGTGTACGGATGAGAGGCCCTTTATTCGTCTCAGTTTTTAGCCCTC TAATGCTAGTCATGGTCGTCATTGCTGGTTCTACCATGTTGAATGAGCAGCTACACCTTGGATGCATCATTGGAGCAGTG TTGATTGTTTGTGGCTTATACGCAGTATTATGGGGGAAAAGCGAAGAGATGAAGAAAAGGAATCAATTAGTGCCGACGAC GCAAAGTCCCCACCATGAATCCAATGATGCAGTGGAAATAGTGGTCAGGTCTGGAGTAGTAGAAGATAAAAGCAATCTTA GTAGCCAAGATAATGGTGTGCAAGTTGTTAGGGATAATGAAGATTCACCAGATGGACAAGATAAAAGTTCACATGCACAC AACACAATCAGGGAATACTAG
Protein sequence (LotjaGi6g1v0356700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMKGICNVVQGLKPALLMVLVQIAFAGVNVLYKLAVNNGMSLRVVVAYRFIFATAFIAPLAFILERKKRTKMTWTILFQS FLCGLFGGSLAQNFYLEALALTSATFASAMSNLVPAITFIMAVSFGLEKLNLRTAAGKAKIVGTLTGIGGAMVLTFVKGI DIKMGSFHINLLHYPNGAQHSQASTTGGKTLLGSLCALASGISYALWLIIQTKMSEKYPTHYSSTALMSFWGSIISVVFA LCVERDWSQWRLGWNVRLLTVAYSGMVVSGAMVVVISWCVRMRGPLFVSVFSPLMLVMVVIAGSTMLNEQLHLGCIIGAV LIVCGLYAVLWGKSEEMKKRNQLVPTTQSPHHESNDAVEIVVRSGVVEDKSNLSSQDNGVQVVRDNEDSPDGQDKSSHAH NTIREY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 10 | 390 | 381 | 3.7E-210 | ||
| PANTHER | 10 | 390 | 381 | 3.7E-210 | – | |
| Phobius | 12 | 32 | 21 | - | – | |
| Pfam | 13 | 138 | 126 | 5.5E-15 | ||
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 33 | 43 | 11 | - | – | |
| Phobius | 44 | 64 | 21 | - | – | |
| TMHMM | 45 | 64 | 20 | - | – | |
| SUPERFAMILY | 48 | 143 | 96 | 2.35E-9 | – | |
| Phobius | 65 | 75 | 11 | - | – | |
| Phobius | 76 | 95 | 20 | - | – | |
| TMHMM | 77 | 96 | 20 | - | – | |
| Phobius | 96 | 106 | 11 | - | – | |
| TMHMM | 106 | 128 | 23 | - | – | |
| Phobius | 107 | 127 | 21 | - | – | |
| Phobius | 128 | 138 | 11 | - | – | |
| Phobius | 139 | 157 | 19 | - | – | |
| TMHMM | 141 | 160 | 20 | - | – | |
| Phobius | 158 | 190 | 33 | - | – | |
| TMHMM | 190 | 209 | 20 | - | – | |
| Phobius | 191 | 210 | 20 | - | – | |
| Pfam | 192 | 330 | 139 | 1.2E-10 | ||
| Phobius | 211 | 221 | 11 | - | – | |
| TMHMM | 221 | 243 | 23 | - | – | |
| Phobius | 222 | 241 | 20 | - | – | |
| SUPERFAMILY | 237 | 334 | 98 | 3.14E-9 | – | |
| Phobius | 242 | 260 | 19 | - | – | |
| TMHMM | 258 | 280 | 23 | - | – | |
| Phobius | 261 | 279 | 19 | - | – | |
| Phobius | 280 | 285 | 6 | - | – | |
| Phobius | 286 | 305 | 20 | - | – | |
| TMHMM | 287 | 306 | 20 | - | – | |
| Phobius | 306 | 310 | 5 | - | – | |
| TMHMM | 310 | 332 | 23 | - | – | |
| Phobius | 311 | 330 | 20 | - | – | |
| Phobius | 331 | 406 | 76 | - | – | |
| MobiDBLite | 368 | 406 | 39 | - | – | |
| MobiDBLite | 368 | 383 | 16 | - | – | |
| MobiDBLite | 387 | 406 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0356700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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