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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0092339 |
| Transcript ID | Lj0g3v0092339.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable folate-biopterin transporter 2-like isoform X2 [Cicer arietinum] gi|502125088|ref|XP_004498793.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 48 | 48 | – | – | |
| PANTHER | 2 | 239 | 238 | 8.70E-150 | – | |
| PANTHER | 2 | 239 | 238 | 8.70E-150 | – | |
| SUPERFAMILY | 47 | 238 | 192 | 8.37E-14 | ||
| Phobius | 49 | 75 | 27 | – | – | |
| TMHMM | 49 | 71 | 23 | – | – | |
| Gene3D | 51 | 236 | 186 | 6.60E-17 | – | |
| Pfam | 61 | 228 | 168 | 6.10E-39 | ||
| Phobius | 76 | 94 | 19 | – | – | |
| TMHMM | 86 | 108 | 23 | – | – | |
| Phobius | 95 | 114 | 20 | – | – | |
| Phobius | 115 | 120 | 6 | – | – | |
| Phobius | 121 | 138 | 18 | – | – | |
| TMHMM | 121 | 138 | 18 | – | – | |
| Phobius | 139 | 143 | 5 | – | – | |
| TMHMM | 143 | 165 | 23 | – | – | |
| Phobius | 144 | 165 | 22 | – | – | |
| Phobius | 166 | 185 | 20 | – | – | |
| TMHMM | 186 | 208 | 23 | – | – | |
| Phobius | 186 | 206 | 21 | – | – | |
| Phobius | 207 | 211 | 5 | – | – | |
| Phobius | 212 | 232 | 21 | – | – | |
| TMHMM | 213 | 232 | 20 | – | – | |
| Phobius | 233 | 245 | 13 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0092339.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0092339.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.