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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004324
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We have found 20 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.621s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0092339.1
n.a. PREDICTED: probable folate-biopterin transporter 2-like isoform X2 [Cicer arietinum] gi|502125088|ref|XP_004498793.1| chr0 38408960 38411993 +
2 domain predictions
1 GO term
Lj0g3v0092339.2
n.a. PREDICTED: probable folate-biopterin transporter 2-like isoform X2 [Cicer arietinum] gi|502125088|ref|XP_004498793.1| chr0 38408960 38411993 +
2 domain predictions
1 GO term
Lj0g3v0092339.3
n.a. PREDICTED: probable folate-biopterin transporter 2-like isoform X2 [Cicer arietinum] gi|502125088|ref|XP_004498793.1| chr0 38408975 38411993 +
2 domain predictions
1 GO term
Lj0g3v0187819.1
n.a. PREDICTED: probable folate-biopterin transporter 2-like isoform X1 [Cicer arietinum] gi|502125085|ref|XP_004498792.1| chr0 91642711 91644428 -
2 domain predictions
1 GO term
Lj0g3v0323769.1
n.a. PREDICTED: probable folate-biopterin transporter 8, chloroplastic-like [Cicer arietinum] gi|502178864|ref|XP_004516336.1| chr0 169086537 169090968 -
3 domain predictions
1 GO term
Lj0g3v0362719.1
n.a. PREDICTED: probable folate-biopterin transporter 4-like [Cicer arietinum] gi|502128688|ref|XP_004500047.1| chr0 191282862 191286813 +
3 domain predictions
1 GO term
Lj5g3v0510790.1
n.a. PREDICTED: probable folate-biopterin transporter 6-like isoform X1 [Cicer arietinum] gi|502125097|ref|XP_004498796.1| chr5 5266496 5270494 +
3 domain predictions
1 GO term
Lj5g3v0510800.1
n.a. n.a. chr5 5266496 5271343 -
2 domain predictions
1 GO term
Lj5g3v0510940.1
n.a. PREDICTED: probable folate-biopterin transporter 2-like isoform X2 [Cicer arietinum] gi|502125088|ref|XP_004498793.1| chr5 5345783 5349724 -
3 domain predictions
1 GO term
Lj5g3v2045800.1
n.a. PREDICTED: folate-biopterin transporter 1, chloroplastic-like isoform X2 [Cicer arietinum] gi|502119709|ref|XP_004496713.1| chr5 29338822 29346900 +
3 domain predictions
1 GO term
Lj6g3v0920070.1
n.a. PREDICTED: probable folate-biopterin transporter 4-like [Cicer arietinum] gi|502128688|ref|XP_004500047.1| chr6 9142646 9146282 +
2 domain predictions
1 GO term
Lj6g3v1618170.1
n.a. PREDICTED: probable folate-biopterin transporter 7-like [Cicer arietinum] gi|502080237|ref|XP_004486501.1| chr6 18166668 18171648 -
3 domain predictions
1 GO term
LotjaGi3g1v0327100.1
n.a. FBT8; TAIR: AT2G33280.1 Major facilitator superfamily protein; Swiss-Prot: sp|O22780|FBT9_ARATH Probable folate-biopterin transporter 9, chloroplastic; TrEMBL-Plants: tr|G7IVP1|G7IVP1_MEDTR Folate/biopterin transporter; Found in the gene: LotjaGi3g1v0327100 LjG1.1_chr3 69499636 69504319 +
2 domain predictions
1 GO term
LotjaGi5g1v0053400.1
n.a. Major facilitator superfamily protein; TAIR: AT5G10820.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9LEV7|FBT6_ARATH Probable folate-biopterin transporter 6; TrEMBL-Plants: tr|K7MND7|K7MND7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0053400 LjG1.1_chr5 9120311 9124927 +
2 domain predictions
1 GO term
LotjaGi5g1v0054100.1
n.a. Major facilitator superfamily protein; TAIR: AT5G25050.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q5FV41|FBT2_ARATH Probable folate-biopterin transporter 2; TrEMBL-Plants: tr|I3S4W1|I3S4W1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0054100 LjG1.1_chr5 9196284 9200372 -
2 domain predictions
1 GO term
LotjaGi5g1v0312700.1
n.a. Folate/biopterin transporter; TAIR: AT2G32040.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9SKZ5|FBT1_ARATH Folate-biopterin transporter 1, chloroplastic; TrEMBL-Plants: tr|A0A0R0ELM0|A0A0R0ELM0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0312700 LjG1.1_chr5 63074309 63082895 +
2 domain predictions
1 GO term
LotjaGi5g1v0312700.2
n.a. Folate/biopterin transporter; TAIR: AT2G32040.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9SKZ5|FBT1_ARATH Folate-biopterin transporter 1, chloroplastic; TrEMBL-Plants: tr|A0A0R0ELM0|A0A0R0ELM0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0312700 LjG1.1_chr5 63074832 63082053 +
2 domain predictions
1 GO term
LotjaGi5g1v0312700.3
n.a. Folate/biopterin transporter; TAIR: AT2G32040.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9SKZ5|FBT1_ARATH Folate-biopterin transporter 1, chloroplastic; TrEMBL-Plants: tr|N1NKH4|N1NKH4_ARAHY Putative transmembrane BT1 family protein; Found in the gene: LotjaGi5g1v0312700 LjG1.1_chr5 63075159 63082053 +
2 domain predictions
1 GO term
LotjaGi6g1v0166200.1
n.a. Major facilitator superfamily protein; TAIR: AT5G54860.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q8RWQ5|FBT4_ARATH Probable folate-biopterin transporter 4; TrEMBL-Plants: tr|I1KY57|I1KY57_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0166200 LjG1.1_chr6 45021287 45025471 +
2 domain predictions
1 GO term
LotjaGi6g1v0266000.1
n.a. Major facilitator superfamily protein; TAIR: AT1G64890.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9XIQ7|FBT7_ARATH Probable folate-biopterin transporter 7; TrEMBL-Plants: tr|I3SSK5|I3SSK5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0266000 LjG1.1_chr6 57982497 57987504 -
2 domain predictions
1 GO term