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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0223539 |
| Transcript ID | Lj0g3v0223539.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable sulfate transporter 3.3-like [Glycine max] gi|356575898|ref|XP_003556073.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 360 | 360 | 3.10E-270 | ||
| PANTHER | 1 | 360 | 360 | 3.10E-270 | ||
| Phobius | 1 | 19 | 19 | – | – | |
| Phobius | 1 | 1 | 1 | – | – | |
| Pfam | 2 | 182 | 181 | 4.20E-53 | ||
| Phobius | 2 | 13 | 12 | – | – | |
| Phobius | 14 | 19 | 6 | – | – | |
| Phobius | 20 | 42 | 23 | – | – | |
| Phobius | 43 | 65 | 23 | – | – | |
| TMHMM | 44 | 66 | 23 | – | – | |
| Phobius | 66 | 85 | 20 | – | – | |
| TMHMM | 86 | 108 | 23 | – | – | |
| Phobius | 86 | 107 | 22 | – | – | |
| Phobius | 108 | 118 | 11 | – | – | |
| Phobius | 119 | 141 | 23 | – | – | |
| TMHMM | 121 | 143 | 23 | – | – | |
| Phobius | 142 | 147 | 6 | – | – | |
| TMHMM | 148 | 170 | 23 | – | – | |
| Phobius | 148 | 171 | 24 | – | – | |
| Phobius | 172 | 176 | 5 | – | – | |
| TMHMM | 177 | 199 | 23 | – | – | |
| Phobius | 177 | 205 | 29 | – | – | |
| Phobius | 206 | 360 | 155 | – | – | |
| ProSiteProfiles | 233 | 354 | 122 | 25.414 | ||
| CDD | 234 | 347 | 114 | 8.26E-21 | – | |
| Pfam | 235 | 350 | 116 | 1.50E-29 | ||
| Gene3D | 239 | 355 | 117 | 1.10E-17 | ||
| SUPERFAMILY | 239 | 354 | 116 | 9.42E-15 | ||
| Coils | 321 | 341 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0223539.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0223539.2, powered by CORGI.
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