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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0299869 |
| Transcript ID | Lj0g3v0299869.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: topless-related protein 1-like [Glycine max] gi|356550630|ref|XP_003543688.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 576 | 576 | 0 | ||
| PANTHER | 1 | 576 | 576 | 0 | – | |
| ProSiteProfiles | 4 | 36 | 33 | 10.297 | ||
| SMART | 4 | 36 | 33 | 3.10E-05 | ||
| SMART | 34 | 92 | 59 | 1.10E-13 | ||
| ProSiteProfiles | 34 | 92 | 59 | 13.366 | ||
| MobiDBLite | 192 | 318 | 127 | – | – | |
| Gene3D | 340 | 572 | 233 | 2.90E-30 | ||
| SUPERFAMILY | 346 | 571 | 226 | 1.97E-28 | ||
| SMART | 346 | 385 | 40 | 36 | ||
| SMART | 406 | 446 | 41 | 59 | ||
| ProSiteProfiles | 414 | 576 | 163 | 15.452 | ||
| SMART | 450 | 493 | 44 | 0.0017 | ||
| Pfam | 457 | 493 | 37 | 4.90E-04 | ||
| ProSiteProfiles | 459 | 502 | 44 | 10.909 | ||
| ProSitePatterns | 480 | 494 | 15 | – | ||
| SMART | 496 | 537 | 42 | 0.085 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj0g3v0299869.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0299869.3, powered by CORGI.
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