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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0329159 |
| Transcript ID | Lj0g3v0329159.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: ABC transporter D family member 1-like [Cicer arietinum] gi|502135726|ref|XP_004502432.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | – | – | |
| PANTHER | 1 | 355 | 355 | 1.10E-157 | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| PANTHER | 1 | 355 | 355 | 1.10E-157 | – | |
| TMHMM | 4 | 23 | 20 | – | – | |
| Pfam | 5 | 261 | 257 | 3.70E-82 | ||
| Phobius | 9 | 18 | 10 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| Phobius | 24 | 151 | 128 | – | – | |
| SUPERFAMILY | 44 | 319 | 276 | 3.92E-11 | ||
| TMHMM | 44 | 66 | 23 | – | – | |
| Gene3D | 47 | 319 | 273 | 7.10E-09 | – | |
| ProSiteProfiles | 53 | 243 | 191 | 10.325 | ||
| TMHMM | 152 | 171 | 20 | – | – | |
| Phobius | 152 | 170 | 19 | – | – | |
| Phobius | 171 | 242 | 72 | – | – | |
| Coils | 181 | 201 | 21 | – | – | |
| TMHMM | 234 | 256 | 23 | – | – | |
| Phobius | 243 | 261 | 19 | – | – | |
| Phobius | 262 | 280 | 19 | – | – | |
| Phobius | 281 | 300 | 20 | – | – | |
| Phobius | 301 | 389 | 89 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0329159.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0329159.2, powered by CORGI.
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