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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011527
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 238 results. Now displaying 1 of 5 with 50 rows per page. This search has taken 6.020s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0041889.1
n.a. PREDICTED: ABC transporter C family member 12-like [Glycine max] gi|356517706|ref|XP_003527527.1| chr0 13755005 13768595 +
2 domain predictions
4 GO terms
Lj0g3v0041899.1
n.a. PREDICTED: ABC transporter C family member 2-like [Glycine max] gi|356508251|ref|XP_003522872.1| chr0 13770401 13778552 +
2 domain predictions
4 GO terms
Lj0g3v0045069.1
n.a. PREDICTED: ABC transporter C family member 5-like [Glycine max] gi|356545904|ref|XP_003541373.1| chr0 14815358 14817592 +
4 domain predictions
4 GO terms
Lj0g3v0045269.1
n.a. PREDICTED: ABC transporter C family member 5-like [Cicer arietinum] gi|502114794|ref|XP_004495053.1| chr0 14883471 14884283 -
4 domain predictions
4 GO terms
Lj0g3v0048519.1
n.a. PREDICTED: ABC transporter B family member 28-like [Glycine max] gi|356530907|ref|XP_003534020.1| chr0 16341719 16348251 -
4 domain predictions
4 GO terms
Lj0g3v0048519.2
n.a. PREDICTED: ABC transporter B family member 28-like [Cicer arietinum] gi|502165769|ref|XP_004513684.1| chr0 16341719 16348251 -
4 domain predictions
4 GO terms
Lj0g3v0066079.1
n.a. PREDICTED: ABC transporter B family member 4-like [Glycine max] gi|356499544|ref|XP_003518599.1| chr0 23131074 23138102 +
4 domain predictions
4 GO terms
Lj0g3v0068559.1
n.a. n.a. chr0 24564625 24570218 +
4 domain predictions
4 GO terms
Lj0g3v0068559.3
n.a. n.a. chr0 24565605 24570218 +
4 domain predictions
4 GO terms
Lj0g3v0070149.1
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 25500628 25508114 -
4 domain predictions
4 GO terms
Lj0g3v0077889.2
n.a. PREDICTED: ABC transporter D family member 1-like isoform 1 [Glycine max] gi|356540293|ref|XP_003538624.1| chr0 29945243 29949461 -
2 domain predictions
4 GO terms
Lj0g3v0077939.1
n.a. PREDICTED: ABC transporter C family member 12-like [Cicer arietinum] gi|502127602|ref|XP_004499768.1| chr0 29963707 29964851 +
4 domain predictions
4 GO terms
Lj0g3v0077939.2
n.a. PREDICTED: ABC transporter C family member 12-like [Cicer arietinum] gi|502127602|ref|XP_004499768.1| chr0 29963707 29963954 +
2 domain predictions
4 GO terms
Lj0g3v0088939.1
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 36412676 36417842 -
4 domain predictions
4 GO terms
Lj0g3v0188219.1
n.a. PREDICTED: ABC transporter C family member 3-like [Glycine max] gi|356524338|ref|XP_003530786.1| chr0 91905530 91907730 -
4 domain predictions
4 GO terms
Lj0g3v0206709.1
n.a. PREDICTED: ABC transporter C family member 12-like [Cicer arietinum] gi|502127602|ref|XP_004499768.1| chr0 103056351 103059902 +
4 domain predictions
4 GO terms
Lj0g3v0211629.1
n.a. PREDICTED: ABC transporter C family member 12-like [Glycine max] gi|356517706|ref|XP_003527527.1| chr0 106650389 106656979 +
4 domain predictions
4 GO terms
Lj0g3v0222689.1
n.a. PREDICTED: ABC transporter C family member 10-like [Cicer arietinum] gi|502119079|ref|XP_004496497.1| chr0 114613500 114618750 -
4 domain predictions
4 GO terms
Lj0g3v0246249.2
n.a. PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 13-like [Cicer arietinum] gi|502080578|ref|XP_004486609.1| chr0 127549679 127553617 +
3 domain predictions
4 GO terms
Lj0g3v0249719.1
n.a. PREDICTED: ABC transporter C family member 12-like [Cicer arietinum] gi|502174413|ref|XP_004515510.1| chr0 129453228 129458543 -
4 domain predictions
4 GO terms
Lj0g3v0275429.1
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 142870377 142876339 +
4 domain predictions
4 GO terms
Lj0g3v0285989.1
n.a. ABC transporter B family member [Medicago truncatula] gi|357463203|ref|XP_003601883.1| chr0 148513399 148520767 +
4 domain predictions
4 GO terms
Lj0g3v0300949.1
n.a. PREDICTED: ABC transporter C family member 3-like [Glycine max] gi|356566246|ref|XP_003551345.1| chr0 156405919 156408814 -
4 domain predictions
4 GO terms
Lj0g3v0304749.1
n.a. PREDICTED: ABC transporter B family member 2-like [Glycine max] gi|356497653|ref|XP_003517674.1| chr0 158742776 158749005 +
4 domain predictions
4 GO terms
Lj0g3v0306379.1
n.a. PREDICTED: ABC transporter C family member 5-like [Glycine max] gi|356545904|ref|XP_003541373.1| chr0 159858016 159866960 +
4 domain predictions
4 GO terms
Lj0g3v0306379.2
n.a. PREDICTED: ABC transporter C family member 5-like [Glycine max] gi|356545904|ref|XP_003541373.1| chr0 159858016 159866960 +
4 domain predictions
4 GO terms
Lj0g3v0317109.1
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 165627202 165636355 +
4 domain predictions
4 GO terms
Lj0g3v0317109.2
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 165627202 165636355 +
4 domain predictions
4 GO terms
Lj0g3v0317109.3
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356535814|ref|XP_003536438.1| chr0 165632111 165636355 +
4 domain predictions
4 GO terms
Lj0g3v0323809.1
n.a. ABC transporter ATP-binding protein [Medicago truncatula] gi|357479203|ref|XP_003609887.1| chr0 169137575 169139007 -
4 domain predictions
4 GO terms
Lj0g3v0329159.1
n.a. PREDICTED: LOW QUALITY PROTEIN: ABC transporter D family member 1-like [Cicer arietinum] gi|502135726|ref|XP_004502432.1| chr0 172072181 172084266 -
4 domain predictions
4 GO terms
Lj0g3v0329159.2
n.a. PREDICTED: LOW QUALITY PROTEIN: ABC transporter D family member 1-like [Cicer arietinum] gi|502135726|ref|XP_004502432.1| chr0 172072181 172078704 -
4 domain predictions
4 GO terms
Lj1g3v0809800.1
n.a. PREDICTED: ABC transporter B family member 25-like [Glycine max] gi|356513473|ref|XP_003525438.1| chr1 10628448 10634642 -
2 domain predictions
4 GO terms
Lj1g3v3194580.1
n.a. PREDICTED: ABC transporter B family member 20-like [Glycine max] gi|356568961|ref|XP_003552676.1| chr1 36293048 36301550 +
4 domain predictions
4 GO terms
Lj1g3v3207790.1
n.a. PREDICTED: ABC transporter B family member 20-like [Glycine max] gi|356568961|ref|XP_003552676.1| chr1 36364354 36366985 +
4 domain predictions
4 GO terms
Lj1g3v4104820.1
n.a. PREDICTED: ABC transporter C family member 10-like [Cicer arietinum] gi|502119079|ref|XP_004496497.1| chr1 48697493 48700940 +
4 domain predictions
4 GO terms
Lj1g3v4528420.1
n.a. PREDICTED: ABC transporter C family member 5-like [Glycine max] gi|356505072|ref|XP_003521316.1| chr1 53314020 53321677 -
4 domain predictions
4 GO terms
Lj1g3v4591220.1
n.a. PREDICTED: ABC transporter B family member 1-like, partial [Cicer arietinum] gi|502111456|ref|XP_004494063.1| chr1 55006170 55013726 -
4 domain predictions
4 GO terms
Lj1g3v4830300.1
n.a. ATP-binding cassette protein [Lotus japonicus] gi|396080274|dbj|BAM33973.1| chr1 58339006 58347196 -
4 domain predictions
4 GO terms
Lj1g3v4830300.2
n.a. ATP-binding cassette protein [Lotus japonicus] gi|396080274|dbj|BAM33973.1| chr1 58348664 58354562 -
4 domain predictions
4 GO terms
Lj1g3v4896960.1
n.a. PREDICTED: ABC transporter C family member 4-like [Glycine max] gi|356536723|ref|XP_003536885.1| chr1 59350458 59357787 -
4 domain predictions
4 GO terms
Lj2g3v0451470.1
n.a. PREDICTED: ABC transporter B family member 28-like [Cicer arietinum] gi|502165769|ref|XP_004513684.1| chr2 6530159 6536664 +
4 domain predictions
4 GO terms
Lj2g3v0451470.2
n.a. PREDICTED: ABC transporter B family member 28-like [Cicer arietinum] gi|502165769|ref|XP_004513684.1| chr2 6530159 6536664 +
4 domain predictions
4 GO terms
Lj2g3v0727390.1
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr2 11532096 11539643 -
4 domain predictions
4 GO terms
Lj2g3v0855230.1
n.a. multidrug/pheromone exporter, MDR family, ABC transporter family [Populus trichocarpa] gi|224143631|ref|XP_002325023.1| chr2 13160526 13169142 +
4 domain predictions
4 GO terms
Lj2g3v1022420.1
n.a. PREDICTED: ABC transporter B family member 15-like [Cicer arietinum] gi|502090823|ref|XP_004489352.1| chr2 16070382 16073857 -
4 domain predictions
4 GO terms
Lj2g3v1022430.1
n.a. PREDICTED: ABC transporter B family member 15-like [Cicer arietinum] gi|502090823|ref|XP_004489352.1| chr2 16074973 16079968 -
4 domain predictions
4 GO terms
Lj2g3v1022510.1
n.a. PREDICTED: ABC transporter B family member 15-like [Cicer arietinum] gi|502090823|ref|XP_004489352.1| chr2 16109441 16117977 -
4 domain predictions
4 GO terms
Lj2g3v1022510.2
n.a. PREDICTED: ABC transporter B family member 15-like [Cicer arietinum] gi|502090823|ref|XP_004489352.1| chr2 16109599 16118873 -
4 domain predictions
4 GO terms
Lj2g3v1055960.1
n.a. PREDICTED: ABC transporter B family member 19-like [Cicer arietinum] gi|502090922|ref|XP_004489384.1| chr2 16696058 16704393 -
4 domain predictions
4 GO terms