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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4538830 |
| Transcript ID | Lj1g3v4538830.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | RNI-like superfamily protein [Arabidopsis thaliana] gi|42569177|ref|NP_179611.2| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 470 | 470 | – | – | |
| PANTHER | 56 | 129 | 74 | 2.90E-109 | – | |
| PANTHER | 56 | 129 | 74 | 2.90E-109 | – | |
| SUPERFAMILY | 153 | 463 | 311 | 5.02E-25 | – | |
| Gene3D | 194 | 252 | 59 | 5.80E-26 | ||
| PANTHER | 194 | 253 | 60 | 2.90E-109 | – | |
| PANTHER | 194 | 253 | 60 | 2.90E-109 | – | |
| Gene3D | 289 | 463 | 175 | 5.80E-26 | ||
| PANTHER | 357 | 463 | 107 | 2.90E-109 | – | |
| PANTHER | 357 | 463 | 107 | 2.90E-109 | – | |
| SMART | 359 | 386 | 28 | 1.9 | – | |
| Pfam | 360 | 380 | 21 | 0.54 | ||
| SMART | 387 | 414 | 28 | 4.8 | – | |
| Pfam | 387 | 406 | 20 | 0.0065 | ||
| SMART | 419 | 446 | 28 | 38 | – | |
| TMHMM | 471 | 490 | 20 | – | – | |
| Phobius | 471 | 490 | 20 | – | – | |
| Phobius | 491 | 491 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v4538830.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4538830.2, powered by CORGI.
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