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Lj1g3v4668120.2

Overview

Field Value
Gene ID Lj1g3v4668120
Transcript ID Lj1g3v4668120.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART
SM00177
14 196 183 6.80E-04 –
Gene3D
G3DSA:3.40.50.300
21 226 206 1.60E-66
IPR027417
PANTHER
PTHR24073
23 227 205 1.80E-150 –
PANTHER
PTHR24073:SF536
23 227 205 1.80E-150 –
ProSiteProfiles
PS51419
26 227 202 30.897 –
SUPERFAMILY
SSF52540
27 214 188 3.68E-55
IPR027417
SMART
SM00173
28 195 168 1.00E-26 –
CDD
cd01863
31 192 162 7.82E-95 –
PRINTS
PR00449
31 52 22 8.50E-36 –
TIGRFAM
TIGR00231
31 187 157 5.00E-28
IPR005225
SMART
SM00175
31 195 165 3.30E-95 –
Pfam
PF00071
32 193 162 2.90E-52
IPR001806
SMART
SM00174
33 195 163 1.50E-13 –
SMART
SM00176
36 226 191 3.70E-04 –
PRINTS
PR00449
53 69 17 8.50E-36 –
PRINTS
PR00449
71 93 23 8.50E-36 –
PRINTS
PR00449
135 148 14 8.50E-36 –
PRINTS
PR00449
170 192 23 8.50E-36 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 78

Expression data

Expression pattern

Expression pattern of Lj1g3v4668120.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4668120.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.