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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0661330 |
| Transcript ID | Lj2g3v0661330.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | leucine-rich repeat family protein [Arabidopsis lyrata subsp]. lyrata] gi|297847122|ref|XP_002891442.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 957 | 957 | 1.40E-268 | – | |
| PANTHER | 1 | 957 | 957 | 1.40E-268 | – | |
| Gene3D | 159 | 327 | 169 | 8.90E-32 | ||
| SUPERFAMILY | 177 | 327 | 151 | 5.44E-27 | ||
| SMART | 191 | 212 | 22 | 38 | – | |
| Pfam | 193 | 229 | 37 | 2.20E-06 | ||
| ProSiteProfiles | 193 | 214 | 22 | 7.042 | ||
| SMART | 213 | 234 | 22 | 96 | – | |
| ProSiteProfiles | 215 | 236 | 22 | 6.526 | ||
| ProSiteProfiles | 240 | 261 | 22 | 6.488 | ||
| Pfam | 241 | 298 | 58 | 1.90E-06 | ||
| SMART | 260 | 281 | 22 | 4.4 | – | |
| ProSiteProfiles | 262 | 283 | 22 | 8.243 | ||
| ProSiteProfiles | 287 | 308 | 22 | 4.878 | ||
| Coils | 405 | 425 | 21 | – | – | |
| MobiDBLite | 569 | 598 | 30 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v0661330.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0661330.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.