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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1002560 |
| Transcript ID | Lj2g3v1002560.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | E1-E2 type truncated ATPase [Phaseolus vulgaris] gi|270342132|gb|ACZ74715.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| TIGRFAM | 1 | 877 | 877 | 0 | ||
| Phobius | 1 | 178 | 178 | – | – | |
| PANTHER | 1 | 879 | 879 | 0 | – | |
| PANTHER | 1 | 879 | 879 | 0 | ||
| SUPERFAMILY | 2 | 24 | 23 | 6.41E-33 | – | |
| Gene3D | 2 | 88 | 87 | 8.10E-23 | ||
| SUPERFAMILY | 25 | 86 | 62 | 6.67E-12 | – | |
| PRINTS | 67 | 81 | 15 | 1.10E-07 | – | |
| SUPERFAMILY | 121 | 161 | 41 | 6.67E-12 | – | |
| Gene3D | 126 | 162 | 37 | 8.10E-23 | ||
| SUPERFAMILY | 163 | 295 | 133 | 6.41E-33 | – | |
| Phobius | 179 | 200 | 22 | – | – | |
| TMHMM | 179 | 201 | 23 | – | – | |
| Phobius | 201 | 234 | 34 | – | – | |
| TMHMM | 235 | 257 | 23 | – | – | |
| Phobius | 235 | 257 | 23 | – | – | |
| Phobius | 258 | 804 | 547 | – | – | |
| Gene3D | 291 | 342 | 52 | 1.20E-45 | ||
| SUPERFAMILY | 296 | 312 | 17 | 6.48E-33 | ||
| PRINTS | 301 | 315 | 15 | 1.10E-07 | – | |
| ProSitePatterns | 303 | 309 | 7 | – | ||
| SUPERFAMILY | 378 | 538 | 161 | 3.05E-23 | ||
| Gene3D | 389 | 585 | 197 | 1.20E-45 | ||
| Pfam | 418 | 506 | 89 | 9.10E-11 | – | |
| SUPERFAMILY | 519 | 626 | 108 | 6.48E-33 | ||
| Gene3D | 586 | 643 | 58 | 8.40E-48 | ||
| SUPERFAMILY | 705 | 804 | 100 | 6.48E-33 | ||
| TIGRFAM | 719 | 831 | 113 | 1.80E-30 | ||
| Gene3D | 720 | 806 | 87 | 8.40E-48 | ||
| PRINTS | 749 | 768 | 20 | 1.10E-07 | – | |
| Pfam | 777 | 877 | 101 | 2.10E-50 | ||
| SUPERFAMILY | 798 | 874 | 77 | 6.41E-33 | – | |
| TMHMM | 805 | 827 | 23 | – | – | |
| Phobius | 805 | 826 | 22 | – | – | |
| Phobius | 827 | 840 | 14 | – | – | |
| Phobius | 841 | 861 | 21 | – | – | |
| TMHMM | 842 | 861 | 20 | – | – | |
| Phobius | 862 | 879 | 18 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Phospholipid transport | The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Expression pattern of Lj2g3v1002560.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1002560.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.