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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001757
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We have found 263 results. Now displaying 1 of 6 with 50 rows per page. This search has taken 5.691s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0004229.1
n.a. PREDICTED: phospholipid-transporting ATPase 1-like [Cicer arietinum] gi|502158473|ref|XP_004511165.1| chr0 1478816 1484524 +
2 domain predictions
1 GO term
Lj0g3v0023589.1
n.a. PREDICTED: cadmium/zinc-transporting ATPase HMA2-like isoform X2 [Cicer arietinum] gi|502085535|ref|XP_004487940.1| chr0 9421236 9435009 +
2 domain predictions
1 GO term
Lj0g3v0023589.2
n.a. Zn/Cd P(IB)-type ATPase [Medicago truncatula] gi|357449309|ref|XP_003594931.1| chr0 9421236 9435009 +
2 domain predictions
1 GO term
Lj0g3v0041659.1
n.a. PREDICTED: ATPase 8, plasma membrane-type-like isoform X1 [Cicer arietinum] gi|502151321|ref|XP_004508383.1| chr0 13724251 13727315 -
3 domain predictions
1 GO term
Lj0g3v0042639.1
n.a. PREDICTED: cadmium/zinc-transporting ATPase HMA2-like isoform X2 [Cicer arietinum] gi|502085535|ref|XP_004487940.1| chr0 13958267 13960148 -
2 domain predictions
1 GO term
Lj0g3v0067579.1
n.a. PREDICTED: ATPase 11, plasma membrane-type-like isoform 1 [Glycine max] gi|356508600|ref|XP_003523043.1| chr0 24009873 24019264 -
3 domain predictions
1 GO term
Lj0g3v0067579.2
n.a. PREDICTED: ATPase 11, plasma membrane-type-like isoform 1 [Glycine max] gi|356516750|ref|XP_003527056.1| chr0 24013773 24020348 -
3 domain predictions
1 GO term
Lj0g3v0075159.1
n.a. Zn/Cd P(IB)-type ATPase [Medicago truncatula] gi|357479567|ref|XP_003610069.1| chr0 28466337 28469555 -
2 domain predictions
1 GO term
Lj0g3v0104529.1
n.a. PREDICTED: phospholipid-transporting ATPase 1-like [Cicer arietinum] gi|502127216|ref|XP_004499606.1| chr0 44759005 44765014 -
2 domain predictions
1 GO term
Lj0g3v0126429.2
n.a. PREDICTED: copper-transporting ATPase RAN1-like isoform X2 [Cicer arietinum] gi|502141831|ref|XP_004504660.1| chr0 56884150 56888752 +
3 domain predictions
1 GO term
Lj0g3v0133769.1
n.a. PREDICTED: cadmium/zinc-transporting ATPase 3-like [Glycine max] gi|356564834|ref|XP_003550652.1| chr0 61252549 61258969 +
2 domain predictions
1 GO term
Lj0g3v0217649.1
n.a. P-type ATPase [Glycine max] gi|373432581|dbj|BAL46411.1| chr0 110776922 110779299 +
2 domain predictions
1 GO term
Lj0g3v0253989.1
n.a. PREDICTED: phospholipid-transporting ATPase 3-like [Glycine max] gi|356570066|ref|XP_003553212.1| chr0 131799620 131806228 -
2 domain predictions
1 GO term
Lj0g3v0289499.2
n.a. aminophospholipid ATPase [Populus trichocarpa] gi|224121336|ref|XP_002318557.1| chr0 150337541 150345011 -
2 domain predictions
1 GO term
Lj0g3v0293799.1
n.a. PREDICTED: calcium-transporting ATPase 9, plasma membrane-type-like [Cicer arietinum] gi|502080501|ref|XP_004486584.1| chr0 152584887 152590629 +
3 domain predictions
1 GO term
Lj0g3v0312389.1
n.a. ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Theobroma cacao] gi|508710299|gb|EOY02196.1| chr0 163054856 163060208 -
2 domain predictions
1 GO term
Lj0g3v0312389.2
n.a. ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Theobroma cacao] gi|508710299|gb|EOY02196.1| chr0 163055108 163060173 -
2 domain predictions
1 GO term
Lj0g3v0318659.1
n.a. type IIB calcium ATPase [Medicago truncatula] gi|18483249|gb|AAL73984.1|AF466149_1 chr0 166424464 166437540 -
3 domain predictions
1 GO term
Lj0g3v0318659.3
n.a. type IIB calcium ATPase [Medicago truncatula] gi|18483249|gb|AAL73984.1|AF466149_1 chr0 166434564 166437084 -
3 domain predictions
1 GO term
Lj1g3v0695110.1
n.a. PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cicer arietinum] gi|502142103|ref|XP_004504792.1| chr1 8997172 9005083 -
2 domain predictions
1 GO term
Lj1g3v1385230.1
n.a. PREDICTED: probable cation-transporting ATPase-like [Cicer arietinum] gi|502137236|ref|XP_004503017.1| chr1 16836439 16849281 +
2 domain predictions
1 GO term
Lj1g3v1720240.1
n.a. PREDICTED: calcium-transporting ATPase 1, chloroplastic-like isoform X2 [Cicer arietinum] gi|502132775|ref|XP_004501522.1| chr1 20284783 20288237 +
2 domain predictions
1 GO term
Lj1g3v1721250.1
n.a. PREDICTED: calcium-transporting ATPase 1, chloroplastic-like [Glycine max] gi|356510560|ref|XP_003524005.1| chr1 20288354 20295957 +
3 domain predictions
1 GO term
Lj1g3v1733460.1
n.a. PREDICTED: calcium-transporting ATPase 3, endoplasmic reticulum-type-like isoform 1 [Glycine max] gi|356510586|ref|XP_003524018.1| chr1 20389370 20413808 +
3 domain predictions
1 GO term
Lj1g3v1733460.2
n.a. PREDICTED: calcium-transporting ATPase 3, endoplasmic reticulum-type-like isoform 1 [Glycine max] gi|356510586|ref|XP_003524018.1| chr1 20406188 20413808 +
3 domain predictions
1 GO term
Lj1g3v1788240.1
n.a. copper P1B-ATPase [Glycine max] gi|110630091|gb|ABD64063.1| chr1 21409305 21418458 +
2 domain predictions
1 GO term
Lj1g3v1788240.2
n.a. copper P1B-ATPase [Glycine max] gi|110630091|gb|ABD64063.1| chr1 21409305 21418458 +
2 domain predictions
1 GO term
Lj1g3v1966250.1
n.a. PREDICTED: plasma membrane ATPase 4-like [Cicer arietinum] gi|502132162|ref|XP_004501246.1| chr1 23288263 23297566 +
3 domain predictions
1 GO term
Lj1g3v2471250.1
n.a. PREDICTED: phospholipid-transporting ATPase 1-like [Glycine max] gi|356530169|ref|XP_003533656.1| chr1 28688119 28696112 -
2 domain predictions
1 GO term
Lj1g3v4236960.1
n.a. type IIB calcium ATPase [Medicago truncatula] gi|18483249|gb|AAL73984.1|AF466149_1 chr1 49977113 49986338 -
3 domain predictions
1 GO term
Lj1g3v4447110.1
n.a. PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Glycine max] gi|356570602|ref|XP_003553474.1| chr1 52091174 52095076 -
3 domain predictions
1 GO term
Lj1g3v4447110.2
n.a. PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Glycine max] gi|356570602|ref|XP_003553474.1| chr1 52091174 52096946 -
3 domain predictions
1 GO term
Lj1g3v4578600.1
n.a. PREDICTED: calcium-transporting ATPase 4, endoplasmic reticulum-type-like [Glycine max] gi|356572369|ref|XP_003554341.1| chr1 54230531 54235932 +
2 domain predictions
1 GO term
Lj1g3v4578600.2
n.a. PREDICTED: calcium-transporting ATPase 4, endoplasmic reticulum-type-like [Glycine max] gi|356572369|ref|XP_003554341.1| chr1 54231376 54235932 +
2 domain predictions
1 GO term
Lj1g3v4578610.1
n.a. Endoplasmic reticulum-type calcium-transporting ATPase [Medicago truncatula] gi|357510473|ref|XP_003625525.1| chr1 54233307 54237175 +
2 domain predictions
1 GO term
Lj1g3v5061270.1
n.a. PREDICTED: ATPase 10, plasma membrane-type-like [Cicer arietinum] gi|502114188|ref|XP_004494890.1| chr1 62054875 62063725 +
3 domain predictions
1 GO term
Lj2g3v1002560.2
n.a. E1-E2 type truncated ATPase [Phaseolus vulgaris] gi|270342132|gb|ACZ74715.1| chr2 15228974 15236102 +
2 domain predictions
1 GO term
Lj2g3v1024320.1
n.a. PREDICTED: ATPase 11, plasma membrane-type-like [Glycine max] gi|356572262|ref|XP_003554288.1| chr2 16390764 16398562 +
3 domain predictions
1 GO term
Lj2g3v1192980.1
n.a. ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Theobroma cacao] gi|508710299|gb|EOY02196.1| chr2 18852109 18859800 +
2 domain predictions
1 GO term
Lj2g3v1353620.1
n.a. PREDICTED: phospholipid-transporting ATPase 3-like [Glycine max] gi|356570066|ref|XP_003553212.1| chr2 21336194 21341582 +
2 domain predictions
1 GO term
Lj2g3v1353620.2
n.a. PREDICTED: phospholipid-transporting ATPase 3-like [Glycine max] gi|356570066|ref|XP_003553212.1| chr2 21336194 21341582 +
2 domain predictions
1 GO term
Lj2g3v1968240.1
n.a. type IIB calcium ATPase MCA5 [Medicago truncatula] gi|21314227|gb|AAM44081.1| chr2 28627566 28633115 -
3 domain predictions
1 GO term
Lj2g3v2017610.1
n.a. Heavy metal atpase 5 [Theobroma cacao] gi|508777445|gb|EOY24701.1| chr2 30921746 30925742 +
3 domain predictions
1 GO term
Lj2g3v2017620.1
n.a. Heavy metal P-type ATPase [Medicago truncatula] gi|357518503|ref|XP_003629540.1| chr2 30927788 30932465 +
2 domain predictions
1 GO term
Lj3g3v0015480.1
n.a. PREDICTED: ATPase 9, plasma membrane-type-like [Glycine max] gi|356550652|ref|XP_003543699.1| chr3 342237 343855 +
2 domain predictions
1 GO term
Lj3g3v0015490.1
n.a. H+-ATPase [Mimosa pudica] gi|194361954|dbj|BAG55917.1| chr3 344006 344866 +
3 domain predictions
1 GO term
Lj3g3v0323390.1
n.a. Aminophospholipid ATPase [Medicago truncatula] gi|357454575|ref|XP_003597568.1| chr3 2496762 2502979 +
2 domain predictions
1 GO term
Lj3g3v0323390.2
n.a. Aminophospholipid ATPase [Medicago truncatula] gi|357454575|ref|XP_003597568.1| chr3 2496762 2502256 +
2 domain predictions
1 GO term
Lj3g3v0527240.1
n.a. PREDICTED: plasma membrane ATPase 1-like isoform 2 [Glycine max] gi|356520782|ref|XP_003529039.1| chr3 5998704 6006655 -
3 domain predictions
1 GO term
Lj3g3v0718340.1
n.a. Heavy metal ATPase [Medicago truncatula] gi|357513319|ref|XP_003626948.1| chr3 7812257 7818994 +
3 domain predictions
1 GO term