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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1559440 |
| Transcript ID | Lj4g3v1559440.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable alpha-mannosidase I MNS5-like [Glycine max] gi|356562767|ref|XP_003549640.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 31 | 31 | – | – | |
| Phobius | 1 | 10 | 10 | – | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| SignalP | 1 | 33 | 33 | – | – | |
| SignalP | 1 | 27 | 27 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| PANTHER | 11 | 572 | 562 | 0 | – | |
| PANTHER | 11 | 572 | 562 | 0 | – | |
| Phobius | 11 | 26 | 16 | – | – | |
| Phobius | 27 | 31 | 5 | – | – | |
| Gene3D | 27 | 482 | 456 | 6.40E-149 | ||
| Phobius | 32 | 572 | 541 | – | – | |
| SUPERFAMILY | 36 | 492 | 457 | 5.10E-140 | ||
| Pfam | 45 | 478 | 434 | 1.60E-110 | ||
| PRINTS | 45 | 65 | 21 | 1.20E-55 | ||
| PRINTS | 130 | 148 | 19 | 1.20E-55 | ||
| PRINTS | 180 | 199 | 20 | 1.20E-55 | ||
| PRINTS | 271 | 288 | 18 | 1.20E-55 | ||
| PRINTS | 328 | 344 | 17 | 1.20E-55 | ||
| PRINTS | 385 | 409 | 25 | 1.20E-55 | ||
| PRINTS | 444 | 464 | 21 | 1.20E-55 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | Catalysis of the hydrolysis of the terminal (1->2)-linked alpha-D-mannose residues in an oligo-mannose oligosaccharide. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj4g3v1559440.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1559440.1, powered by CORGI.
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