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Lj4g3v2991200.2

Overview

Field Value
Gene ID Lj4g3v2991200
Transcript ID Lj4g3v2991200.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description RecName: Full=Serine/threonine-protein phosphatase PP1gi|575672|emb|CAA56766.1| potentially catalitic subunit of the ser /thr protein phosphatase 1 [Medicago sativa subsp]. x varia] gi|1346763|sp|P48488.1|PP1_MEDVA
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11668:SF244
1 95 95 1.60E-68 –
PANTHER
PTHR11668
1 95 95 1.60E-68 –
Pfam
PF00149
1 78 78 4.50E-07
IPR004843
SMART
SM00156
1 114 114 2.80E-06
IPR006186
Gene3D
G3DSA:3.60.21.10
1 106 106 4.30E-40
IPR029052
SUPERFAMILY
SSF56300
1 99 99 4.64E-34
IPR029052
PRINTS
PR00114
12 39 28 1.70E-21
IPR006186
PRINTS
PR00114
69 89 21 1.70E-21
IPR006186
MobiDBLite
mobidb-lite
102 124 23 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of

Genome browser

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj4g3v2991200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2991200.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.