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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006186
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We have found 116 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 7.984s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0278189.1
n.a. PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 1-like [Cicer arietinum] gi|502155470|ref|XP_004510082.1| chr0 144465061 144465513 +
2 domain predictions
1 GO term
Lj0g3v0300529.1
n.a. protein phosphatase 1 catalitic subunit [Medicago sativa] gi|3176076|emb|CAA05493.1| chr0 156153751 156158582 -
4 domain predictions
1 GO term
Lj0g3v0334279.1
n.a. PREDICTED: serine/threonine-protein phosphatase 7-like [Glycine max] gi|356531319|ref|XP_003534225.1| chr0 174951999 174959092 -
4 domain predictions
1 GO term
Lj1g3v4763900.1
n.a. PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Cicer arietinum] gi|502112354|ref|XP_004494304.1| chr1 57201547 57206785 +
4 domain predictions
1 GO term
Lj1g3v4918780.1
n.a. PREDICTED: serine/threonine-protein phosphatase PP1-like [Glycine max] gi|356505811|ref|XP_003521683.1| chr1 59715120 59718009 +
4 domain predictions
1 GO term
Lj2g3v1364780.1
n.a. PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Cicer arietinum] gi|502093455|ref|XP_004489948.1| chr2 21384404 21389264 -
4 domain predictions
1 GO term
Lj2g3v2661450.1
n.a. PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4-like [Cicer arietinum] gi|502096857|ref|XP_004490848.1| chr2 35836494 35842251 -
4 domain predictions
1 GO term
Lj2g3v3224220.1
n.a. PREDICTED: serine/threonine-protein phosphatase PP-X isozyme 2-like isoform X2 [Cicer arietinum] gi|502099270|ref|XP_004491437.1| chr2 41223069 41227463 -
4 domain predictions
1 GO term
Lj3g3v0323380.1
n.a. PREDICTED: serine/threonine-protein phosphatase 7-like [Glycine max] gi|356550416|ref|XP_003543583.1| chr3 2485241 2490358 -
3 domain predictions
1 GO term
Lj3g3v0323380.2
n.a. PREDICTED: serine/threonine-protein phosphatase 7 inactive homolog isoform X2 [Cicer arietinum] gi|502081380|ref|XP_004486849.1| chr3 2485241 2490358 -
3 domain predictions
1 GO term
Lj3g3v0461550.1
n.a. PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 1-like [Cicer arietinum] gi|502155470|ref|XP_004510082.1| chr3 4875057 4876530 -
3 domain predictions
1 GO term
Lj3g3v1294420.2
n.a. BRI1 suppressor 1 (BSU1)-like 3 isoform 4 [Theobroma cacao] gi|508786023|gb|EOY33279.1| chr3 16460160 16469937 -
4 domain predictions
1 GO term
Lj3g3v2928410.1
n.a. BRI1 suppressor 1 (BSU1)-like 2 isoform 1 [Theobroma cacao] gi|508786020|gb|EOY33276.1| chr3 36606657 36618050 +
4 domain predictions
1 GO term
Lj3g3v2928410.2
n.a. BRI1 suppressor 1 (BSU1)-like 2 isoform 1 [Theobroma cacao] gi|508786020|gb|EOY33276.1| chr3 36607398 36618050 +
4 domain predictions
1 GO term
Lj4g3v2603900.1
n.a. PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Glycine max] gi|356512485|ref|XP_003524949.1| chr4 34975993 34983070 +
4 domain predictions
1 GO term
Lj4g3v2991200.1
n.a. PREDICTED: serine/threonine-protein phosphatase PP1-like [Cicer arietinum] gi|502139166|ref|XP_004503668.1| chr4 39552729 39556911 -
4 domain predictions
1 GO term
Lj4g3v2991200.2
n.a. RecName: Full=Serine/threonine-protein phosphatase PP1gi|575672|emb|CAA56766.1| potentially catalitic subunit of the ser /thr protein phosphatase 1 [Medicago sativa subsp]. x varia] gi|1346763|sp|P48488.1|PP1_MEDVA chr4 39552729 39554991 -
3 domain predictions
1 GO term
Lj5g3v0713360.1
n.a. calcineurin-like phosphoesterase [Glycine max] gi|351721901|ref|NP_001237737.1| chr5 10716525 10720629 -
2 domain predictions
1 GO term
Lj5g3v1170950.1
n.a. protein phosphatase 1 catalitic subunit [Medicago sativa] gi|3176076|emb|CAA05493.1| chr5 18638561 18643469 +
4 domain predictions
1 GO term
Lj5g3v1341890.1
n.a. catalytic subunit of protein phosphatase 1 [Vicia faba] gi|114213458|dbj|BAF31132.1| chr5 20540441 20546950 +
4 domain predictions
1 GO term
Lj5g3v1341900.1
n.a. PREDICTED: serine/threonine-protein phosphatase PP1-like [Cicer arietinum] gi|502116728|ref|XP_004495569.1| chr5 20540441 20547638 +
3 domain predictions
1 GO term
Lj5g3v1681440.1
n.a. Serine/threonine protein phosphatase [Medicago truncatula] gi|357442633|ref|XP_003591594.1| chr5 23874799 23889323 -
2 domain predictions
1 GO term
Lj5g3v1681440.2
n.a. PREDICTED: serine/threonine-protein phosphatase BSL1-like [Glycine max] gi|356500242|ref|XP_003518942.1| chr5 23874799 23900121 -
2 domain predictions
1 GO term
Lj5g3v2263930.1
n.a. PREDICTED: phytochrome-associated serine/threonine-protein phosphatase-like [Cicer arietinum] gi|502123393|ref|XP_004498094.1| chr5 33029484 33035533 +
4 domain predictions
1 GO term
Lj6g3v0030130.1
n.a. n.a. chr6 614538 619079 -
4 domain predictions
1 GO term
Lj6g3v0925630.1
n.a. PREDICTED: serine/threonine-protein phosphatase 5-like isoform X2 [Cicer arietinum] gi|502128536|ref|XP_004499995.1| chr6 9674307 9682813 -
3 domain predictions
1 GO term
LotjaGi1g1v0022900.1
n.a. Serine/threonine-protein phosphatase; TAIR: AT5G55260.1 protein phosphatase X 2; Swiss-Prot: sp|P48528|PPX2_ARATH Serine/threonine-protein phosphatase PP-X isozyme 2; TrEMBL-Plants: tr|G7K499|G7K499_MEDTR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0022900 LjG1.1_chr1 2787757 2792383 +
4 domain predictions
1 GO term
LotjaGi1g1v0022900.2
n.a. Serine/threonine-protein phosphatase; TAIR: AT5G55260.1 protein phosphatase X 2; Swiss-Prot: sp|P48528|PPX2_ARATH Serine/threonine-protein phosphatase PP-X isozyme 2; TrEMBL-Plants: tr|G7K499|G7K499_MEDTR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0022900 LjG1.1_chr1 2787939 2791223 +
4 domain predictions
1 GO term
LotjaGi1g1v0022900.3
n.a. Serine/threonine-protein phosphatase; TAIR: AT5G55260.1 protein phosphatase X 2; Swiss-Prot: sp|P48528|PPX2_ARATH Serine/threonine-protein phosphatase PP-X isozyme 2; TrEMBL-Plants: tr|A0A1J7GQT7|A0A1J7GQT7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0022900 LjG1.1_chr1 2787950 2791419 +
4 domain predictions
1 GO term
LotjaGi1g1v0086000.1
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G39840.1 type one serine/threonine protein phosphatase 4; Swiss-Prot: sp|P48484|PP14_ARATH Serine/threonine-protein phosphatase PP1 isozyme 4; TrEMBL-Plants: tr|C6TII4|C6TII4_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0086000 LjG1.1_chr1 12453159 12459606 +
4 domain predictions
1 GO term
LotjaGi1g1v0086000.2
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G39840.1 type one serine/threonine protein phosphatase 4; Swiss-Prot: sp|P48484|PP14_ARATH Serine/threonine-protein phosphatase PP1 isozyme 4; TrEMBL-Plants: tr|C6TII4|C6TII4_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0086000 LjG1.1_chr1 12453386 12455110 +
4 domain predictions
1 GO term
LotjaGi1g1v0086000.3
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G39840.1 type one serine/threonine protein phosphatase 4; Swiss-Prot: sp|P48484|PP14_ARATH Serine/threonine-protein phosphatase PP1 isozyme 4; TrEMBL-Plants: tr|C6TII4|C6TII4_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0086000 LjG1.1_chr1 12453407 12455234 +
4 domain predictions
1 GO term
LotjaGi1g1v0086000.4
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G39840.1 type one serine/threonine protein phosphatase 4; Swiss-Prot: sp|P48484|PP14_ARATH Serine/threonine-protein phosphatase PP1 isozyme 4; TrEMBL-Plants: tr|C6TII4|C6TII4_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0086000 LjG1.1_chr1 12453407 12455275 +
4 domain predictions
1 GO term
LotjaGi1g1v0743100.1
n.a. Serine/threonine-protein phosphatase; TAIR: AT3G58500.1 protein phosphatase 2A-4; Swiss-Prot: sp|Q06009|PP2A_MEDSA Serine/threonine-protein phosphatase PP2A catalytic subunit; TrEMBL-Plants: tr|A0A0S3S0M7|A0A0S3S0M7_PHAAN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0743100 LjG1.1_chr1 131666893 131673348 +
4 domain predictions
1 GO term
LotjaGi1g1v0743100.2
n.a. Serine/threonine-protein phosphatase; TAIR: AT3G58500.1 protein phosphatase 2A-4; Swiss-Prot: sp|Q06009|PP2A_MEDSA Serine/threonine-protein phosphatase PP2A catalytic subunit; TrEMBL-Plants: tr|G8A1A9|G8A1A9_MEDTR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0743100 LjG1.1_chr1 131667604 131672536 +
4 domain predictions
1 GO term
LotjaGi1g1v0743100.3
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G42500.2 protein phosphatase 2A-3; Swiss-Prot: sp|P48578|PP2A3_ARATH Serine/threonine-protein phosphatase PP2A-3 catalytic subunit; TrEMBL-Plants: tr|F4IN36|F4IN36_ARATH Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0743100 LjG1.1_chr1 131667604 131672536 +
4 domain predictions
1 GO term
LotjaGi1g1v0743100.4
n.a. Serine/threonine-protein phosphatase; TAIR: AT3G58500.1 protein phosphatase 2A-4; Swiss-Prot: sp|Q06009|PP2A_MEDSA Serine/threonine-protein phosphatase PP2A catalytic subunit; TrEMBL-Plants: tr|I1NAY9|I1NAY9_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0743100 LjG1.1_chr1 131667604 131672536 +
4 domain predictions
1 GO term
LotjaGi1g1v0743100.5
n.a. Serine/threonine-protein phosphatase; TAIR: AT3G58500.1 protein phosphatase 2A-4; Swiss-Prot: sp|Q06009|PP2A_MEDSA Serine/threonine-protein phosphatase PP2A catalytic subunit; TrEMBL-Plants: tr|A0A0S3S0M7|A0A0S3S0M7_PHAAN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0743100 LjG1.1_chr1 131667604 131672536 +
4 domain predictions
1 GO term
LotjaGi1g1v0769800.1
n.a. Serine/threonine-protein phosphatase; TAIR: AT3G05580.1 Calcineurin-like metallo-phosphoesterase superfamily protein; Swiss-Prot: sp|P48490|PP1_PHAVU Serine/threonine-protein phosphatase PP1; TrEMBL-Plants: tr|V7BQZ7|V7BQZ7_PHAVU Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0769800 LjG1.1_chr1 134210232 134214125 +
4 domain predictions
1 GO term
LotjaGi1g1v0769800.2
n.a. Serine/threonine-protein phosphatase; TAIR: AT3G05580.1 Calcineurin-like metallo-phosphoesterase superfamily protein; Swiss-Prot: sp|P48490|PP1_PHAVU Serine/threonine-protein phosphatase PP1; TrEMBL-Plants: tr|V7BQZ7|V7BQZ7_PHAVU Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0769800 LjG1.1_chr1 134210330 134212912 +
4 domain predictions
1 GO term
LotjaGi1g1v0769800.3
n.a. Serine/threonine-protein phosphatase; TAIR: AT3G05580.1 Calcineurin-like metallo-phosphoesterase superfamily protein; Swiss-Prot: sp|P48490|PP1_PHAVU Serine/threonine-protein phosphatase PP1; TrEMBL-Plants: tr|A0A0B2SE63|A0A0B2SE63_GLYSO Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0769800 LjG1.1_chr1 134210575 134212844 +
4 domain predictions
1 GO term
LotjaGi1g1v0785700.1
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G39840.1 type one serine/threonine protein phosphatase 4; Swiss-Prot: sp|P48489|PP1_ORYSJ Serine/threonine-protein phosphatase PP1; TrEMBL-Plants: tr|G7I691|G7I691_MEDTR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0785700 LjG1.1_chr1 135815732 135819482 -
4 domain predictions
1 GO term
LotjaGi1g1v0785700.2
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G39840.1 type one serine/threonine protein phosphatase 4; Swiss-Prot: sp|P48489|PP1_ORYSJ Serine/threonine-protein phosphatase PP1; TrEMBL-Plants: tr|A0A151TXU8|A0A151TXU8_CAJCA Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0785700 LjG1.1_chr1 135817591 135819264 -
4 domain predictions
1 GO term
LotjaGi1g1v0785700.3
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G39840.1 type one serine/threonine protein phosphatase 4; Swiss-Prot: sp|P48489|PP1_ORYSJ Serine/threonine-protein phosphatase PP1; TrEMBL-Plants: tr|G7I691|G7I691_MEDTR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0785700 LjG1.1_chr1 135817685 135819289 -
4 domain predictions
1 GO term
LotjaGi1g1v0785700.4
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G39840.1 type one serine/threonine protein phosphatase 4; Swiss-Prot: sp|P48489|PP1_ORYSJ Serine/threonine-protein phosphatase PP1; TrEMBL-Plants: tr|G7I691|G7I691_MEDTR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0785700 LjG1.1_chr1 135817762 135819289 -
4 domain predictions
1 GO term
LotjaGi1g1v0785700.5
n.a. Serine/threonine-protein phosphatase; TAIR: AT2G39840.1 type one serine/threonine protein phosphatase 4; Swiss-Prot: sp|P48489|PP1_ORYSJ Serine/threonine-protein phosphatase PP1; TrEMBL-Plants: tr|A0A151TXU8|A0A151TXU8_CAJCA Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0785700 LjG1.1_chr1 135817851 135819264 -
4 domain predictions
1 GO term
LotjaGi2g1v0312400.1
n.a. Serine/threonine-protein phosphatase; TAIR: AT1G10430.1 protein phosphatase 2A-2; Swiss-Prot: sp|Q9ZSE4|PP2A_HEVBR Serine/threonine-protein phosphatase PP2A catalytic subunit; TrEMBL-Plants: tr|V7CKW4|V7CKW4_PHAVU Serine/threonine-protein phosphatase; Found in the gene: LotjaGi2g1v0312400 LjG1.1_chr2 78722034 78727121 -
4 domain predictions
1 GO term
LotjaGi2g1v0312400.2
n.a. Serine/threonine-protein phosphatase; TAIR: AT1G10430.1 protein phosphatase 2A-2; Swiss-Prot: sp|P23636|PP2A2_SCHPO Major serine/threonine-protein phosphatase PP2A-2 catalytic subunit; TrEMBL-Plants: tr|S1RW33|S1RW33_THECC Serine/threonine-protein phosphatase; Found in the gene: LotjaGi2g1v0312400 LjG1.1_chr2 78723301 78726817 -
4 domain predictions
1 GO term
LotjaGi3g1v0027700.1
n.a. Serine/threonine-protein phosphatase; TAIR: AT5G63870.1 serine/threonine phosphatase 7; Swiss-Prot: sp|Q9FN02|PPP7_ARATH Serine/threonine-protein phosphatase 7; TrEMBL-Plants: tr|K7M3M0|K7M3M0_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0027700 LjG1.1_chr3 3001006 3006453 -
3 domain predictions
1 GO term
LotjaGi3g1v0027700.2
n.a. Serine/threonine-protein phosphatase; TAIR: AT5G10900.2 Calcineurin-like metallo-phosphoesterase superfamily protein; Swiss-Prot: sp|Q9FN02|PPP7_ARATH Serine/threonine-protein phosphatase 7; TrEMBL-Plants: tr|K7M3M0|K7M3M0_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi3g1v0027700 LjG1.1_chr3 3001006 3006453 -
3 domain predictions
1 GO term