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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0009000 |
| Transcript ID | LotjaGi1g1v0009000.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein htpG family protein; TAIR: AT3G07770.1 HEAT SHOCK PROTEIN 89.1; Swiss-Prot: sp|F4JFN3|HS906_ARATH Heat shock protein 90-6, mitochondrial; TrEMBL-Plants: tr|A0A151S032|A0A151S032_CAJCA Heat shock protein 90; Found in the gene: LotjaGi1g1v0009000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1163635..1168752) extracted from Lotus japonicus Gifu genome v1.2.
TCGGTGGGTGAGAATGAGAATGACACCAAATCCAGATGTTATTCTTCTTCTTCTTCTTCTTCTTCTCTATTAACCTCTGA CAAATCCACTGCTCATCCCAATTGGAAACGGGACAGCATTTTTCTGGGCAAACGATATGAATCCACTGCTGCTGAATCTT CATCTTCTGGGGATTCCCCGTCTGCTCAAAGATTTGAGTACCAAGCAGAGGTATGTATGTATATATGGTTATTTCTCAAC CTGCACTGCATGCCATGATGATATGTGTACTGACCATGATTTTGTGTAATATGCATAGGTTAGCCGTCTCATGGACCTCA TTGTTAACAGTCTATACAGTAACAAGGAGGTGTTTCTCAGGGAACTTATCAGGTATTATACTGTTGCAAATGTTTCATTA GTGGTTGCTTATCTTGTCCTGATTGTTAATGGCGGATAGCCTAGTGTAGCGGCAAGCCCAAAAAACGCTATTGAGCGGTG AATAGTGGAGTAGTGGTGAACCCCAGGGCGGGCTATTAACAAGCCTGCCTGAAACCTTTTTAGAATTATGTTGTTGGATA AAGCATAGAGTTAAGAGTGCTATGTGTCAGTTGAAGGATTTGAAGCTACACAGTTTCAATGCCATTGTTATGGAATTTAT TTAACTACATTCAAACTTATAGCTTAAATTGCCTGTTAAAGACACTTTGATCTTGATAAAATTATTAATTTTTCTAATGA GGCTATTTCGAGAAATAGACTACCTATATCTCTGGTTTTGATTGGATGTTATATATATGCATTGTTGTTCAAACTGGCTA TTTATGCTTTTCTTTTCTCGTTACAGTAATGCAAGCGATGCGTTGGACAAACTGCGGTTTTTGAGCGTTACAGAGCCTGA GCTGATGAAGGATGCGGTTGAATTTGATATCCGCATTCATACTGATAAAGATAATGGGATTGTCACTATTACGTAAGATA AAAAGCTTTTGATTTTGTGATTTGGATTTTTATTTTAAAATTCGGCTGGTAACTCGATTTTTGTTTTATGCAGCGATACA GGCATTGGTATGACTAAGCAAGAATTGATTGATTGTCTTGGAACTATTGCTCAAAGTGGAACTGCAAAGTTTTTGAAAGC TTTAAAGGTTCTGCCTCTTCAAAATGATGCTTCGGGATTATATTGTCTTCATTTCATTTTTCAGCTATGTATTTATGTGC TGACAAGGTGTATCATTTAATAGGATAGCAAAGATGCTGGTGGTGACAACAACTTAATTGGTCAATTTGGTGTAGGATTT TATTCTGCTTTTCTGGTTGCTGATCGGGTATGCATTTGTGTTCTAGTAAAAAGTTGATCTATATATATTTTTATTTTAAA TATGGTAGTTATATCTTTTCTTTGTTGCTTGAAGGTGGTTGTCTCAACAAAGAGTCCAAAATCTGATAAACAATATGTTT GGGAAGGAGAGGCAAATGCTAGTTCATATATCATATCTGAGGAAACCGATCCTGAGAAGCTGGTTCCTAGAGGAACTCGC CTTACACTATATCTTAAGGTATGTTGATAATCTCCATGTTTGGTCTTCAATTCATTTAGTTTCTTCATTCAGAAGCTTAC AAATGCGTGTGCATTTTACCCACTGCTAACTTCCAGAGGGACGACAAAGGGTTTGCGCATCCAGAGCGGATTCAAAAGCT TGTGAAAAACTACTCACAATTTGTCTCATTCCCGATATACACTTGGCAGGAAAAGGGATTCACCAAAGAAGTATGGCTAA TGATTCAGATGTTTTCATTTTTATGATGCTATATTTGTATTGTTCGCTCGAAGTTATTTAACAACCCTCCCCCCCCCCCC CCCCAAATCCTATGGAAATTAATTTGGGATCTTTCCAGGTGGAGGTTGATGAGGATCCGGCTGAAGCCAAAACGGATGAA CAAGATGAGAAGACTGAGGTAGCGTTCTGATTGTTCTGCATATATATACACTGTATTGAGTATTGATGAGTGTGAATGTG TGATTGTTTAGCTACCACTTTTACTTACATATTAATGAGTTTGACATGTGTTTGTTACAGAAGAAGAAGAAAACTAAAAC TGTTGTGGAGAAGTATTGGGATTGGGAGCTCACAAATGAGACCCAACCTATTTGGGTGAGTTTTATGATTTCCTATTTCA TGGTTTGTCCTGAACTCAGAATTTTATTTATTGAATGAAGATTTAGACATTACTCTATCTGCACAGCTTCGTAATCCTAA AGAAGTCACTAAGGAGGAGTACAATGAGTTTTACAAGAATACTTTCAATGAATACCTGGAGCCATTGGCATCATCACACT TTACCACAGAGGTAACATTTTTTATTGTCTCAAAATGCTTCTTGTTCTGTTGCATGTTGTTGGATGTTGATATTTACTGT TTGCTACTAGACAAATAGTTTGATAGCCTCAAATTTCCGCTCAAGACCTAATTTGATCGCTAATGTTTTGGTTTTGGTAT TGCAGGGTGAGGTAGAATTTAGGTCTGTACTTTATGTTCCTGCCTTCGCTCCTTCAGGGAAGGATGATATAATCAATCCC AAGACCAAAAATATCAGACTTTATGTGAAAAGAGTTTTCATTTCAGATGACTTTGATGGAGAACTGGTATAAGCACTTTG CTCTTTTGATCTTGAGTATTTGGATGGTGTTCTCACAGTTTATCCTGTGCTAATGTATTATTTGTTTGAACAGTTCCCCA GATACTTAAGTTTCGTTAAAGGTGTGGTTGACTCAAATGACCTTCCACTCAACGTGTCACGTGAAATACTTCAAGAGAGC CGCATAGTAAGTAGATAGGGCACACATCCACTTAATTTTATACCTGGAATTTTCTTTGGTGATACATGTATAAAATTCCT TCCGAGTTTCAACTTGATAAAAAAAATTCTATGTGGTGCTTGAAGGTGCGGATTATGAGGAAACGCTTGGTTAGAAAGGC TTTTGACATGATTCTGGGGATATCCATGAGTGAGAACAGAGAGGTAAGTTCTAATTCAGATAAATTGTAGTTGTACAGTT TGCTTTTTTGATTTTGTTAAGTTAGAAGGGACTGGATAAATTATTGTGGCTTAATCTTTGATAGTTTAACATATATACCT CTTGCTCAGTTGTTTTATGTATCTTTTATAACTGCTTTTATAGAAAGAACTGCATGTTTCATGATAGCATTTACCAGCTG CCTTCATCTGTTTGCAGGACTATGAGAAATTCTGGGATAACTTTGGCAAACACTTAAAATTGGGTTGCATTGAAGACCGT GAGAATCACAAACGACTTGCTCCATTGCTTCGGTTTTTCTCGAACCAAAGTGAGGAAGACCTGATCAGCTTGGATGAATA TGTTGATTGCATGCAACCTGATCAAAAGGATATTTATTACATTGCTGCTGACAGCGTGTCTAGTGCTAAGAACACACCTT TCTTGGAGAAACTTGCGGAGAAAAAACTTGAAGTATAAGCTTATCTTTATTAATGATTACAACTTTATCTATTGACTAAT TTATTTTTGTTAATTTATATATGTTGGTGCTTTTTAATGTAATTTTCAGGTCTTGTTTTTGGTGGATCCAATAGACGAGG TTGCCATTCAAAACCTTAAATCATACAAGGAAAAGAATTTTGTTGACATTAGCAAGGAAGACTTGGATCTAGGTTTGCTT ATTTATTTTTTATTCTTCCTTTTGATGATTTTTGGACTTATACTACATTAGACACACATTTGTCTAAATCAAGGGCATTA GCATTTCATTGATCAAATAGTTGTAGTCTCTCTTGAGTTTTGACAGCTATGAAGTTCATGGTCTGGGTCTTCTTTACTCT TCGAACATGTTTGACTTGGTTTATTGTTTCTGAAGGTGATAAGAACGAGGAAAGGGAGAAGGAAGTGAAGCAGGAATTCG CCCAAACATGTGACTGGATCAAAAAACGTTTGGGAGATAAAGTCGCAAGTGTGCAAATTTCAAACAGACTTAGTTCTTCA CCTTGTGTTCTGGTGTCAGGAAAATTTGGGTGGTCTGCAAACATGGAAAGGTGGGTCTTCCGTCCTCTTAGATATTAAAT GATGTATTTCGTAAATTTAATCAACATTTTGTTTTATGTAATAAATTTGCTTCACAGGCTAATGAAGGCACAAAGTATGG GTGATGCCTCCAGCATGGATTTTATGAGAAGCAGAAGGGTGTTTGAGATCAACCCTGACCACCCTATTATCAGGAACTTG GATGTACGATAAGTGAAGAAATGCACTCTCTTGTATTTGTCATGAGTAATAGATCTAATATAGTCAATTGCAAATTGGAA TAATGTTAATGTAATTTAATTGGTGATTTTCAGGCTGCATGCAAAACAAATCCTGACGATCAAGAGGCCGAGAGAGCTAT TGATCTTTTATATGATGCAGCATTGGTTTCCAGTGGTTATACGGTAAGCTCATGGCTTGATATTGTTGTATGAAAAGTTC AATATTAGACATAGTGATACTGAGTTGCATCTTGCATATTGTGCTAAATATTTTATAGCATAGAAGGAATTGGTGCAAGA ACTTCCGTGTGCTACCTTGTCGTTTTTAGCTTTGTTTAAACTGAAGTGCGCTCCAAACTTGTTAGGAACATAATATAAAA ACATTTGTTTCTCCTCATCACATAGCTTAGGCTTTTGTGATAATTAATGACAGTATTAGAATCTTTGTGACCTAGTTATC TCAAGTTTGATACTTGGGGTTTCCATTATTATACTAAAAAAGTTGAATTTTTGCACAAGCTAGGTTGGACTGTGCATGTT TCAAGCTCAATGGGCTCTTGCATGATTGACTTGTTGAAAACATAATATAATCATCATTCATGTGTCTTCATCCAGCAACT AAAGCTTTTCAGATAGTTTCGTTCATGTCAAAATTTGCATCTTCTGACTTAATTTGTTGGTGTGCAGCCTGATAATCCAG CACAGCTTGGAGGAAAGATATACGAAATGATGAGCATGGCTCTCAGTGGTAGATGGTCAGCTTCTGGTCAGTTTCAGTCC ACTGTAACCCAGCCCCCTGTCCCAGAATTTGTAGAAGCTGAGGTGGTTGAACCCACTGAGGCTGATGGTCAGAAGTGA
CDS sequence (LotjaGi1g1v0009000.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGATCCGGCTGAAGCCAAAACGGATGAACAAGATGAGAAGACTGAGAAGAAGAAGAAAACTAAAACTGTTGTGGAG AAGTATTGGGATTGGGAGCTCACAAATGAGACCCAACCTATTTGGTCTATCTGCACAGCTTCGTAATCCTAAAGAAGTCA CTAAGGAGGAGTACAATGAGTTTTACAAGAATACTTTCAATGAATACCTGGAGCCATTGGCATCATCACACTTTACCACA GAGGGTGAGGTAGAATTTAGGTCTGTACTTTATGTTCCTGCCTTCGCTCCTTCAGGGAAGGATGATATAATCAATCCCAA GACCAAAAATATCAGACTTTATGTGAAAAGAGTTTTCATTTCAGATGACTTTGATGGAGAACTGTTCCCCAGATACTTAA GTTTCGTTAAAGGTGTGGTTGACTCAAATGACCTTCCACTCAACGTGTCACGTGAAATACTTCAAGAGAGCCGCATAGTG CGGATTATGAGGAAACGCTTGGTTAGAAAGGCTTTTGACATGATTCTGGGGATATCCATGAGTGAGAACAGAGAGGACTA TGAGAAATTCTGGGATAACTTTGGCAAACACTTAAAATTGGGTTGCATTGAAGACCGTGAGAATCACAAACGACTTGCTC CATTGCTTCGGTTTTTCTCGAACCAAAGTGAGGAAGACCTGATCAGCTTGGATGAATATGTTGATTGCATGCAACCTGAT CAAAAGGATATTTATTACATTGCTGCTGACAGCGTGTCTAGTGCTAAGAACACACCTTTCTTGGAGAAACTTGCGGAGAA AAAACTTGAAGTCTTGTTTTTGGTGGATCCAATAGACGAGGTTGCCATTCAAAACCTTAAATCATACAAGGAAAAGAATT TTGTTGACATTAGCAAGGAAGACTTGGATCTAGGTGATAAGAACGAGGAAAGGGAGAAGGAAGTGAAGCAGGAATTCGCC CAAACATGTGACTGGATCAAAAAACGTTTGGGAGATAAAGTCGCAAGTGTGCAAATTTCAAACAGACTTAGTTCTTCACC TTGTGTTCTGGTGTCAGGAAAATTTGGGTGGTCTGCAAACATGGAAAGGCTAATGAAGGCACAAAGTATGGGTGATGCCT CCAGCATGGATTTTATGAGAAGCAGAAGGGTGTTTGAGATCAACCCTGACCACCCTATTATCAGGAACTTGGATGCTGCA TGCAAAACAAATCCTGACGATCAAGAGGCCGAGAGAGCTATTGATCTTTTATATGATGCAGCATTGGTTTCCAGTGGTTA TACGCCTGATAATCCAGCACAGCTTGGAGGAAAGATATACGAAATGATGAGCATGGCTCTCAGTGGTAGATGGTCAGCTT CTGGTCAGTTTCAGTCCACTGTAACCCAGCCCCCTGTCCCAGAATTTGTAGAAGCTGAGGTGGTTGAACCCACTGAGGCT GATGGTCAGAAGTGA
Protein sequence (LotjaGi1g1v0009000.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRIRLKPKRMNKMRRLRRRRKLKLLWRSIGIGSSQMRPNLFGLSAQLRNPKEVTKEEYNEFYKNTFNEYLEPLASSHFTT EGEVEFRSVLYVPAFAPSGKDDIINPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIV RIMRKRLVRKAFDMILGISMSENREDYEKFWDNFGKHLKLGCIEDRENHKRLAPLLRFFSNQSEEDLISLDEYVDCMQPD QKDIYYIAADSVSSAKNTPFLEKLAEKKLEVLFLVDPIDEVAIQNLKSYKEKNFVDISKEDLDLGDKNEEREKEVKQEFA QTCDWIKKRLGDKVASVQISNRLSSSPCVLVSGKFGWSANMERLMKAQSMGDASSMDFMRSRRVFEINPDHPIIRNLDAA CKTNPDDQEAERAIDLLYDAALVSSGYTPDNPAQLGGKIYEMMSMALSGRWSASGQFQSTVTQPPVPEFVEAEVVEPTEA DGQK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 13 | 13 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 24 | 31 | 8 | - | – | |
| Phobius | 32 | 36 | 5 | - | – | |
| Phobius | 37 | 484 | 448 | - | – | |
| Gene3D | 45 | 212 | 168 | 1.3E-64 | – | |
| PIRSF | 46 | 479 | 434 | 3.3E-129 | ||
| PANTHER | 47 | 477 | 431 | 1.1E-269 | ||
| Pfam | 47 | 450 | 404 | 3.4E-165 | ||
| PANTHER | 47 | 477 | 431 | 1.1E-269 | – | |
| SUPERFAMILY | 48 | 300 | 253 | 1.52E-83 | ||
| Gene3D | 213 | 299 | 87 | 1.5E-32 | – | |
| Gene3D | 300 | 447 | 148 | 2.7E-52 | ||
| SUPERFAMILY | 323 | 443 | 121 | 3.01E-33 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi1g1v0009000.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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