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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001404
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We have found 38 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.919s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0208599.1
n.a. PREDICTED: heat shock protein 83-like [Glycine max] gi|356530818|ref|XP_003533977.1| chr0 104590564 104593941 +
5 domain predictions
3 GO terms
Lj2g3v1203440.1
n.a. PREDICTED: heat shock protein 83-like [Glycine max] gi|356499958|ref|XP_003518802.1| chr2 19348503 19358869 -
3 domain predictions
3 GO terms
Lj2g3v1203440.2
n.a. PREDICTED: heat shock protein 83-like [Glycine max] gi|356499958|ref|XP_003518802.1| chr2 19350178 19358869 -
4 domain predictions
3 GO terms
Lj2g3v3318780.1
n.a. PREDICTED: heat shock cognate protein 80-like [Vitis vinifera] gi|359495606|ref|XP_003635036.1| chr2 41919540 41922631 -
5 domain predictions
3 GO terms
Lj2g3v3337750.1
n.a. Heat-shock protein [Medicago truncatula] gi|357495325|ref|XP_003617951.1| chr2 42415238 42420314 +
4 domain predictions
3 GO terms
Lj2g3v3337750.2
n.a. Heat-shock protein [Medicago truncatula] gi|357495325|ref|XP_003617951.1| chr2 42421269 42426448 +
5 domain predictions
3 GO terms
Lj2g3v3337750.3
n.a. Heat-shock protein [Medicago truncatula] gi|357495325|ref|XP_003617951.1| chr2 42421269 42425915 +
5 domain predictions
3 GO terms
Lj5g3v0238150.1
n.a. PREDICTED: endoplasmin homolog [Glycine max] gi|356553371|ref|XP_003545030.1| chr5 1947402 1952671 -
4 domain predictions
3 GO terms
Lj6g3v0704480.1
n.a. heat shock protein 90 [Vitis pseudoreticulata] gi|159459822|gb|ABW96308.1| chr6 6787554 6790252 +
5 domain predictions
3 GO terms
Lj6g3v0704490.1
n.a. n.a. chr6 6788711 6790856 -
3 domain predictions
3 GO terms
LotjaGi1g1v0009000.1
n.a. Chaperone protein htpG family protein; TAIR: AT3G07770.1 HEAT SHOCK PROTEIN 89.1; Swiss-Prot: sp|F4JFN3|HS906_ARATH Heat shock protein 90-6, mitochondrial; TrEMBL-Plants: tr|A0A151S032|A0A151S032_CAJCA Heat shock protein 90; Found in the gene: LotjaGi1g1v0009000 LjG1.1_chr1 1163263 1168999 -
5 domain predictions
3 GO terms
LotjaGi1g1v0009000.2
n.a. Chaperone protein htpG family protein; TAIR: AT3G07770.1 HEAT SHOCK PROTEIN 89.1; Swiss-Prot: sp|F4JFN3|HS906_ARATH Heat shock protein 90-6, mitochondrial; TrEMBL-Plants: tr|A0A151S032|A0A151S032_CAJCA Heat shock protein 90; Found in the gene: LotjaGi1g1v0009000 LjG1.1_chr1 1163263 1175134 -
5 domain predictions
3 GO terms
LotjaGi1g1v0009000.3
n.a. Chaperone protein htpG family protein; TAIR: AT3G07770.1 HEAT SHOCK PROTEIN 89.1; Swiss-Prot: sp|F4JFN3|HS906_ARATH Heat shock protein 90-6, mitochondrial; TrEMBL-Plants: tr|A0A151S032|A0A151S032_CAJCA Heat shock protein 90; Found in the gene: LotjaGi1g1v0009000 LjG1.1_chr1 1163635 1168752 -
5 domain predictions
3 GO terms
LotjaGi1g1v0009000.4
n.a. Chaperone protein htpG family protein; TAIR: AT3G07770.1 HEAT SHOCK PROTEIN 89.1; Swiss-Prot: sp|F4JFN3|HS906_ARATH Heat shock protein 90-6, mitochondrial; TrEMBL-Plants: tr|A0A151S032|A0A151S032_CAJCA Heat shock protein 90; Found in the gene: LotjaGi1g1v0009000 LjG1.1_chr1 1163635 1168752 -
4 domain predictions
3 GO terms
LotjaGi1g1v0009000.5
n.a. Chaperone protein htpG family protein; TAIR: AT3G07770.1 HEAT SHOCK PROTEIN 89.1; Swiss-Prot: sp|F4JFN3|HS906_ARATH Heat shock protein 90-6, mitochondrial; TrEMBL-Plants: tr|A0A151S032|A0A151S032_CAJCA Heat shock protein 90; Found in the gene: LotjaGi1g1v0009000 LjG1.1_chr1 1163635 1168752 -
4 domain predictions
3 GO terms
LotjaGi1g1v0009000.6
n.a. Chaperone protein htpG family protein; TAIR: AT3G07770.1 HEAT SHOCK PROTEIN 89.1; Swiss-Prot: sp|F4JFN3|HS906_ARATH Heat shock protein 90-6, mitochondrial; TrEMBL-Plants: tr|A0A151S032|A0A151S032_CAJCA Heat shock protein 90; Found in the gene: LotjaGi1g1v0009000 LjG1.1_chr1 1163635 1168752 -
5 domain predictions
3 GO terms
LotjaGi1g1v0009000.7
n.a. Chaperone protein htpG family protein; TAIR: AT3G07770.1 HEAT SHOCK PROTEIN 89.1; Swiss-Prot: sp|F4JFN3|HS906_ARATH Heat shock protein 90-6, mitochondrial; TrEMBL-Plants: tr|A0A1J7HUH6|A0A1J7HUH6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0009000 LjG1.1_chr1 1169980 1175110 -
4 domain predictions
3 GO terms
LotjaGi1g1v0013800.1
n.a. Heat shock protein 90; TAIR: AT5G56000.1 HEAT SHOCK PROTEIN 81.4; Swiss-Prot: sp|P36181|HSP80_SOLLC Heat shock cognate protein 80; TrEMBL-Plants: tr|F6HCU9|F6HCU9_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0013800 LjG1.1_chr1 1792834 1796269 +
5 domain predictions
3 GO terms
LotjaGi1g1v0013800.2
n.a. Heat shock protein 90; TAIR: AT5G56000.1 HEAT SHOCK PROTEIN 81.4; Swiss-Prot: sp|P36181|HSP80_SOLLC Heat shock cognate protein 80; TrEMBL-Plants: tr|F6HCU9|F6HCU9_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0013800 LjG1.1_chr1 1792982 1795827 +
5 domain predictions
3 GO terms
LotjaGi1g1v0013800.3
n.a. Chaperone protein htpG family protein; TAIR: AT5G56000.1 HEAT SHOCK PROTEIN 81.4; Swiss-Prot: sp|Q69QQ6|HSP82_ORYSJ Heat shock protein 81-2; TrEMBL-Plants: tr|B6EBD7|B6EBD7_SOYBN Heat shock protein 90-1; Found in the gene: LotjaGi1g1v0013800 LjG1.1_chr1 1792982 1795827 +
5 domain predictions
3 GO terms
LotjaGi1g1v0013800.4
n.a. Heat shock protein 90; TAIR: AT5G56000.1 HEAT SHOCK PROTEIN 81.4; Swiss-Prot: sp|P36181|HSP80_SOLLC Heat shock cognate protein 80; TrEMBL-Plants: tr|F6HCU9|F6HCU9_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0013800 LjG1.1_chr1 1792996 1795827 +
5 domain predictions
3 GO terms
LotjaGi1g1v0013800.5
n.a. Heat shock protein 90; TAIR: AT5G56000.1 HEAT SHOCK PROTEIN 81.4; Swiss-Prot: sp|P36181|HSP80_SOLLC Heat shock cognate protein 80; TrEMBL-Plants: tr|B6EBD7|B6EBD7_SOYBN Heat shock protein 90-1; Found in the gene: LotjaGi1g1v0013800 LjG1.1_chr1 1792996 1795827 +
5 domain predictions
3 GO terms
LotjaGi2g1v0124300.1
n.a. Heat shock protein 90; TAIR: AT5G52640.1 heat shock-like protein; Swiss-Prot: sp|P51819|HSP83_IPONI Heat shock protein 83; TrEMBL-Plants: tr|I1L314|I1L314_SOYBN Heat shock protein 90-1; Found in the gene: LotjaGi2g1v0124300 LjG1.1_chr2 45664856 45668467 +
5 domain predictions
3 GO terms
LotjaGi2g1v0124300.2
n.a. Chaperone protein htpG family protein; TAIR: AT5G52640.1 heat shock-like protein; Swiss-Prot: sp|P51819|HSP83_IPONI Heat shock protein 83; TrEMBL-Plants: tr|I1L314|I1L314_SOYBN Heat shock protein 90-1; Found in the gene: LotjaGi2g1v0124300 LjG1.1_chr2 45665174 45668177 +
5 domain predictions
3 GO terms
LotjaGi2g1v0124300.3
n.a. Heat shock protein 90; TAIR: AT5G52640.1 heat shock-like protein; Swiss-Prot: sp|P51819|HSP83_IPONI Heat shock protein 83; TrEMBL-Plants: tr|I1L314|I1L314_SOYBN Heat shock protein 90-1; Found in the gene: LotjaGi2g1v0124300 LjG1.1_chr2 45665174 45668177 +
5 domain predictions
3 GO terms
LotjaGi2g1v0124300.4
n.a. Heat shock protein 90; TAIR: AT5G52640.1 heat shock-like protein; Swiss-Prot: sp|P51819|HSP83_IPONI Heat shock protein 83; TrEMBL-Plants: tr|I1L314|I1L314_SOYBN Heat shock protein 90-1; Found in the gene: LotjaGi2g1v0124300 LjG1.1_chr2 45665189 45668177 +
5 domain predictions
3 GO terms
LotjaGi2g1v0289600.1
n.a. Chaperone protein htpG family protein; TAIR: AT2G04030.1 Chaperone protein htpG family protein; Swiss-Prot: sp|Q9SIF2|HS905_ARATH Heat shock protein 90-5, chloroplastic; TrEMBL-Plants: tr|A0A072TVH5|A0A072TVH5_MEDTR Heat shock protein 81-2; Found in the gene: LotjaGi2g1v0289600 LjG1.1_chr2 76276763 76283163 -
5 domain predictions
3 GO terms
LotjaGi2g1v0289600.2
n.a. Chaperone protein htpG family protein; TAIR: AT2G04030.1 Chaperone protein htpG family protein; Swiss-Prot: sp|Q9SIF2|HS905_ARATH Heat shock protein 90-5, chloroplastic; TrEMBL-Plants: tr|A0A072TVH5|A0A072TVH5_MEDTR Heat shock protein 81-2; Found in the gene: LotjaGi2g1v0289600 LjG1.1_chr2 76276763 76283163 -
5 domain predictions
3 GO terms
LotjaGi2g1v0289600.3
n.a. Chaperone protein htpG family protein; TAIR: AT2G04030.1 Chaperone protein htpG family protein; Swiss-Prot: sp|Q9SIF2|HS905_ARATH Heat shock protein 90-5, chloroplastic; TrEMBL-Plants: tr|A0A0L9UT74|A0A0L9UT74_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0289600 LjG1.1_chr2 76276763 76283352 -
5 domain predictions
3 GO terms
LotjaGi5g1v0005000.1
n.a. Chaperone protein htpG family protein; TAIR: AT4G24190.1 Chaperone protein htpG family protein; Swiss-Prot: sp|P35016|ENPL_CATRO Endoplasmin homolog; TrEMBL-Plants: tr|I1MC32|I1MC32_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0005000 LjG1.1_chr5 1139878 1145624 +
5 domain predictions
3 GO terms
LotjaGi5g1v0296600.1
n.a. Heat shock protein 90; TAIR: AT5G52640.1 heat shock-like protein; Swiss-Prot: sp|P51819|HSP83_IPONI Heat shock protein 83; TrEMBL-Plants: tr|A0A0A0L6P6|A0A0A0L6P6_CUCSA Uncharacterized protein; Found in the gene: LotjaGi5g1v0296600 LjG1.1_chr5 61348275 61351191 -
5 domain predictions
3 GO terms
LotjaGi5g1v0296600.2
n.a. Heat shock protein 90; TAIR: AT5G52640.1 heat shock-like protein; Swiss-Prot: sp|P51819|HSP83_IPONI Heat shock protein 83; TrEMBL-Plants: tr|A0A151U689|A0A151U689_CAJCA Heat shock protein 83; Found in the gene: LotjaGi5g1v0296600 LjG1.1_chr5 61348484 61351013 -
5 domain predictions
3 GO terms
LotjaGi5g1v0296600.3
n.a. Chaperone protein htpG family protein; TAIR: AT5G52640.1 heat shock-like protein; Swiss-Prot: sp|P51819|HSP83_IPONI Heat shock protein 83; TrEMBL-Plants: tr|A0A0V0IQG0|A0A0V0IQG0_SOLCH Putative heat shock protein 83-like; Found in the gene: LotjaGi5g1v0296600 LjG1.1_chr5 61348484 61351028 -
5 domain predictions
3 GO terms
LotjaGi5g1v0296600.4
n.a. Chaperone protein htpG family protein; TAIR: AT5G52640.1 heat shock-like protein; Swiss-Prot: sp|P51819|HSP83_IPONI Heat shock protein 83; TrEMBL-Plants: tr|Q71EE1|Q71EE1_HEVBR Heat shock protein; Found in the gene: LotjaGi5g1v0296600 LjG1.1_chr5 61348484 61351028 -
4 domain predictions
3 GO terms
LotjaGi6g1v0139700.1
n.a. Heat shock protein 90; TAIR: AT5G56000.1 HEAT SHOCK PROTEIN 81.4; Swiss-Prot: sp|P36181|HSP80_SOLLC Heat shock cognate protein 80; TrEMBL-Plants: tr|T2AUM9|T2AUM9_POPTO HSP90; Found in the gene: LotjaGi6g1v0139700 LjG1.1_chr6 40657671 40661417 +
5 domain predictions
3 GO terms
LotjaGi6g1v0139700.2
n.a. Chaperone protein htpG family protein; TAIR: AT5G56000.1 HEAT SHOCK PROTEIN 81.4; Swiss-Prot: sp|Q69QQ6|HSP82_ORYSJ Heat shock protein 81-2; TrEMBL-Plants: tr|A0A0D2SEK3|A0A0D2SEK3_GOSRA Uncharacterized protein; Found in the gene: LotjaGi6g1v0139700 LjG1.1_chr6 40657919 40660597 +
5 domain predictions
3 GO terms
LotjaGi6g1v0139700.3
n.a. Heat shock protein 90; TAIR: AT5G56000.1 HEAT SHOCK PROTEIN 81.4; Swiss-Prot: sp|P36181|HSP80_SOLLC Heat shock cognate protein 80; TrEMBL-Plants: tr|D6C500|D6C500_SOYBN HSP90-2; Found in the gene: LotjaGi6g1v0139700 LjG1.1_chr6 40657919 40660597 +
5 domain predictions
3 GO terms
LotjaGi6g1v0139700.4
n.a. Heat shock protein 90; TAIR: AT5G56000.1 HEAT SHOCK PROTEIN 81.4; Swiss-Prot: sp|P36181|HSP80_SOLLC Heat shock cognate protein 80; TrEMBL-Plants: tr|T2AUM9|T2AUM9_POPTO HSP90; Found in the gene: LotjaGi6g1v0139700 LjG1.1_chr6 40657934 40660597 +
5 domain predictions
3 GO terms