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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0013800 |
| Transcript ID | LotjaGi1g1v0013800.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock protein 90; TAIR: AT5G56000.1 HEAT SHOCK PROTEIN 81.4; Swiss-Prot: sp|P36181|HSP80_SOLLC Heat shock cognate protein 80; TrEMBL-Plants: tr|B6EBD7|B6EBD7_SOYBN Heat shock protein 90-1; Found in the gene: LotjaGi1g1v0013800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1792996..1795827) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGAGGCTGAGACGTTTGCGTTCCAGGCTGAGATCAACCAGCTCCTCAGTCTCATCATCAACACCTTCTACAGCAA CAAGGAGATTTTCCTTCGTGAGCTCATCAGCAATGCCTCTGATGTAAGCTTCTTCGTCCTCTTCTCTCGTTTAATCAACA CCTGCTCTCGTTGTCTTTCCGATTTCCTGTGATTTTCATGGCTGTAGATCTGAAATTTCATTCGCTATCGTGTTTCATAC TTGTTACGATCCTTATTATGATTGACCGTAAATCATGTAGTTTATTTGTTACGATCTGTATTAGATTATGTTTTGAATGT TTTGTATTTCTGTTAGATGATTGTCGTTGTTCAAACAGTGTGGATGTACTCAATTTAATTCATTGTATGTGGTTCTACAC TTTTCGTGCGTTTAGCTGGAACTTGTTCTGTTGATATTTCAGAATTCAATTGATGCAGTATTAATTTGAAAGGCATAGTT ATGTTGTGTATATATGTCGGTGTATTTGTATGCATTTTCTGTATTGAAAGCCATAGTTACTTATGTTATGTATCAGTTAA TGTTTCAGAATGCAATTTGAATACAATCTATGTATGTATTTGTACATATTTGCTGGTATGTCTTCGCACAAAAGTTTATG ATGACACCTTTTTAATTGGAATATCTATATTTACATTAAAGATTTTGGTGTGATACTGATTTCTAAATGGATAATTTATC TGATTCCTGATATATCCATGGTTGTGTCAATTAGGCTTTGGACAAGATACGGTTTGAAAGCCTTACAGACAAGAGCAAGC TTGATGGTCAGCCAGAGTTGTTCATCCACATAATTCCTGACAAGACTAACAATTCGTTGACTCTCATCGACAGTGGTATC GGCATGACCAAGGCTGGTAAGTGCGATGGTTTATAAGTCTTTATGAAATTAGTTTATGTAGCCCTGTGCGATTTTGATGA TTGATATTCTCTTATGCTTGTGTGTTTTGTATTCCAGACTTGGTGAACAACCTTGGTACTATTGCAAGGTCTGGGACCAA GGAATTCATGGAAGCACTTGCTGCTGGTGCTGATGTGAGCATGATTGGGCAGTTTGGTGTTGGGTTCTACTCTGCTTATC TTGTAGCTGATAAGGTTATTGTTACCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCCCAGGCTGGTGGCTCA TTCACTGTGACAAGAGATACAACTGGTGAGAGTCTTGGCAGGGGAACTAAGATAACCTTGTATCTCAAGGAGGATCAGCT TGAGTATCTTGAGGAACGCCGTCTGAAGGACTTGATTAAGAAGCACTCAGAATTCATCAGCTATCCAATTTCTCTTTGGA TTGAGAAAACCACTGAGAAGGAGATTTCTGATGATGAGGACGAGGAAGAGAAGAAGGACGAGGAGGGCAAAGTTGAGGAT GTAGATGAAGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAGATTAAGGAGGTATCCCATGAGTGGTCGTTGGTGAACAA ACAGAAGCCAATTTGGATGAGGAAGCCTGAGGAGATTACAAAAGATGAGTATGCTGCTTTCTACAAGAGTCTTACCAATG ATTGGGAAGAGCATCTGGCTGTTAAGCACTTCTCTGTTGAAGGTCAGCTGGAGTTTAAGGCTGTCCTCTTTGTACCCAAG AGAGCACCTTTTGATCTCTTTGACACAAAGAAGAAGCCTAACAATATCAAACTGTATGTCCGCCGTGTCTTCATCATGGA CAACTGTGAGGAGTTGATTCCTGAATATCTTTCTTTTGTTAAGGGTATTGTGGATTCTGAGGATCTTCCGCTGAACATTT CTAGAGAAATGTTGCAGCAGAACAAGATCCTTAAGGTCATCAGGAAGAACTTAGTGAAGAAGTGCATTGAGCTATTCTTT GAAATTGCTGAGAACAAGGAGGACTATAACAAGTTCTATGAGGCCTTCTCTAAGAACCTGAAACTAGGTATTCATGAGGA TACTCAGAACAAGACAAAGATAGCTGAATTGCTGAGGTACCACTCCAATAAGAGTGGTGATGAGCTCACCAGCCTCAAGG ACTATGTGACCAGGATGAAGGAAGGACAAAGTGACATCTACTACATTACAGGTGAAAGCAAGAAATCTGTTGAGAATTCT CCCTTCCTGGAGAAGCTCAAGAAGAAGGGGTACGAGGTGCTTTACATGGTTGATGCCATTGATGAATATGCTGTTGGTCA GCTCAAGGAATTTGAGGGAAAGAAGCTTGTCTCTGCTACTAAGGAAGGCCTGAAGCTTGATGAGACTGAAGATGAAAAGA AGAAGAAGGAAGAGCTCAAGGAGAAATTTGACAATCTCTGCAAGGTGATGAAGGATGTCTTGGGTGACAAGGTTGAGAAA GTTGTGGTATCTGACCGTGTTGTAGACTCTCCTTGCTGTCTTGTGACTGGTGAATATGGGTGGACAGCCAACATGGAAAG GATCATGAAAGCACAGGCATTGAGGGACAGCAGCATGGCTGGTTACATGTCAAGCAAGAAGACCATGGAGATCAACCCCG AGAACCCAATCATGGAGGAGCTTAGGAAGCGTGCAGATGCTGACAAGAATGACAAATCTGTGAAGGATCTAGTTCTCTTG CTCTTTGAGACCGCTATGCTAACCTCTGGGTTCAGCCTTGATGAGCCCAACACTTTCGGTAACAGGATTCACAGGATGCT GAAGCTTGGTCTGAGCATTGATGATGATGCTGCTGAAGCAGATGCTGACATGCCTCCTTTGGAGGATGTTGATGCCGATG CTGAGGGTAGCAAGATGGAAGAGGTTGACTAA
CDS sequence (LotjaGi1g1v0013800.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCAAGGCTGACTTGGTGAACAACCTTGGTACTATTGCAAGGTCTGGGACCAAGGAATTCATGGAAGCACTTGCTGC TGGTGCTGATGTGAGCATGATTGGGCAGTTTGGTGTTGGGTTCTACTCTGCTTATCTTGTAGCTGATAAGGTTATTGTTA CCACAAAGCACAATGATGATGAACAGTATGTCTGGGAGTCCCAGGCTGGTGGCTCATTCACTGTGACAAGAGATACAACT GGTGAGAGTCTTGGCAGGGGAACTAAGATAACCTTGTATCTCAAGGAGGATCAGCTTGAGTATCTTGAGGAACGCCGTCT GAAGGACTTGATTAAGAAGCACTCAGAATTCATCAGCTATCCAATTTCTCTTTGGATTGAGAAAACCACTGAGAAGGAGA TTTCTGATGATGAGGACGAGGAAGAGAAGAAGGACGAGGAGGGCAAAGTTGAGGATGTAGATGAAGAAAAGGAGAAGGAA GAGAAGAAAAAGAAGAAGATTAAGGAGGTATCCCATGAGTGGTCGTTGGTGAACAAACAGAAGCCAATTTGGATGAGGAA GCCTGAGGAGATTACAAAAGATGAGTATGCTGCTTTCTACAAGAGTCTTACCAATGATTGGGAAGAGCATCTGGCTGTTA AGCACTTCTCTGTTGAAGGTCAGCTGGAGTTTAAGGCTGTCCTCTTTGTACCCAAGAGAGCACCTTTTGATCTCTTTGAC ACAAAGAAGAAGCCTAACAATATCAAACTGTATGTCCGCCGTGTCTTCATCATGGACAACTGTGAGGAGTTGATTCCTGA ATATCTTTCTTTTGTTAAGGGTATTGTGGATTCTGAGGATCTTCCGCTGAACATTTCTAGAGAAATGTTGCAGCAGAACA AGATCCTTAAGGTCATCAGGAAGAACTTAGTGAAGAAGTGCATTGAGCTATTCTTTGAAATTGCTGAGAACAAGGAGGAC TATAACAAGTTCTATGAGGCCTTCTCTAAGAACCTGAAACTAGGTATTCATGAGGATACTCAGAACAAGACAAAGATAGC TGAATTGCTGAGGTACCACTCCAATAAGAGTGGTGATGAGCTCACCAGCCTCAAGGACTATGTGACCAGGATGAAGGAAG GACAAAGTGACATCTACTACATTACAGGTGAAAGCAAGAAATCTGTTGAGAATTCTCCCTTCCTGGAGAAGCTCAAGAAG AAGGGGTACGAGGTGCTTTACATGGTTGATGCCATTGATGAATATGCTGTTGGTCAGCTCAAGGAATTTGAGGGAAAGAA GCTTGTCTCTGCTACTAAGGAAGGCCTGAAGCTTGATGAGACTGAAGATGAAAAGAAGAAGAAGGAAGAGCTCAAGGAGA AATTTGACAATCTCTGCAAGGTGATGAAGGATGTCTTGGGTGACAAGGTTGAGAAAGTTGTGGTATCTGACCGTGTTGTA GACTCTCCTTGCTGTCTTGTGACTGGTGAATATGGGTGGACAGCCAACATGGAAAGGATCATGAAAGCACAGGCATTGAG GGACAGCAGCATGGCTGGTTACATGTCAAGCAAGAAGACCATGGAGATCAACCCCGAGAACCCAATCATGGAGGAGCTTA GGAAGCGTGCAGATGCTGACAAGAATGACAAATCTGTGAAGGATCTAGTTCTCTTGCTCTTTGAGACCGCTATGCTAACC TCTGGGTTCAGCCTTGATGAGCCCAACACTTTCGGTAACAGGATTCACAGGATGCTGAAGCTTGGTCTGAGCATTGATGA TGATGCTGCTGAAGCAGATGCTGACATGCCTCCTTTGGAGGATGTTGATGCCGATGCTGAGGGTAGCAAGATGGAAGAGG TTGACTAA
Protein sequence (LotjaGi1g1v0013800.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVADKVIVTTKHNDDEQYVWESQAGGSFTVTRDTT GESLGRGTKITLYLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDEEKEKE EKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKDEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFD TKKKPNNIKLYVRRVFIMDNCEELIPEYLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCIELFFEIAENKED YNKFYEAFSKNLKLGIHEDTQNKTKIAELLRYHSNKSGDELTSLKDYVTRMKEGQSDIYYITGESKKSVENSPFLEKLKK KGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDETEDEKKKKEELKEKFDNLCKVMKDVLGDKVEKVVVSDRVV DSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETAMLT SGFSLDEPNTFGNRIHRMLKLGLSIDDDAAEADADMPPLEDVDADAEGSKMEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 118 | 118 | 2.32905E-63 | – | |
| PANTHER | 1 | 159 | 159 | 0.0 | – | |
| SUPERFAMILY | 1 | 129 | 129 | 3.01E-42 | ||
| Gene3D | 1 | 126 | 126 | 1.8E-66 | ||
| PANTHER | 1 | 159 | 159 | 0.0 | ||
| PIRSF | 1 | 615 | 615 | 1.4E-218 | ||
| Hamap | 1 | 580 | 580 | 20.583 | ||
| PRINTS | 9 | 26 | 18 | 3.8E-45 | ||
| PRINTS | 34 | 56 | 23 | 3.8E-45 | ||
| PRINTS | 86 | 103 | 18 | 3.8E-45 | ||
| Pfam | 100 | 597 | 498 | 3.3E-234 | ||
| PRINTS | 104 | 122 | 19 | 3.8E-45 | ||
| Gene3D | 127 | 168 | 42 | 1.8E-66 | – | |
| MobiDBLite | 131 | 164 | 34 | - | – | |
| MobiDBLite | 133 | 154 | 22 | - | – | |
| Coils | 143 | 173 | 31 | - | – | |
| PANTHER | 161 | 615 | 455 | 0.0 | ||
| PANTHER | 161 | 615 | 455 | 0.0 | – | |
| Gene3D | 178 | 346 | 169 | 4.5E-81 | – | |
| SUPERFAMILY | 179 | 434 | 256 | 2.96E-107 | ||
| Gene3D | 347 | 433 | 87 | 1.1E-37 | – | |
| Gene3D | 434 | 583 | 150 | 6.7E-67 | ||
| Coils | 438 | 458 | 21 | - | – | |
| SUPERFAMILY | 457 | 579 | 123 | 5.89E-39 | ||
| MobiDBLite | 591 | 615 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi1g1v0013800.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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