Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0079200 |
| Transcript ID | LotjaGi1g1v0079200.10 |
| Related isoforms 10 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Auxin influx transporter; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1; TrEMBL-Plants: tr|V7B7B9|V7B7B9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0079200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:11419406..11425718) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTACCCCAGAAGCAAGGTGAAGAAACCATGATGTCAAGCCTGAATGAGGCGATTGAGCATGGCGAAAGAGAGGAAGA GAATGAAGGTGGTGGTTCAGGGCTGAAGAACTTTCTCTGGCATGGTGGCTCTGTTTATGATGCCTGGTTCAGCTGTGCTT CAAATCAGGTAGTGAGATATGGGGTTTGTGAATTGTGAGTGCTGGTCTAATCATTGGAAGTGAGATTCTGTGACCCTTTT TTGGTGTGTGTGAGGGAATTTGATTCGTTTTTGGGTTTGTGCTGTGCAGGTTGCACAGGTTCTGTTAACACTGCCATACT CTTTCTCTCAACTTGGAATGCTTTCAGGAATCATTTTCCAAATCTTCTATGGCTTGCTTGGTAGCTGGACTGCTTATTTG ATTAGTATTCTGTATATTGAGTACAGAACCAGAAAAGAGAAAGAGAATGTTAGCTTCAAAAACCATGTCATTCAGGTTGG TTGCTTACAACATATTTGAATCAGCTTTTTTTCCTCAATCAATTCTGAACTCCGACTTAATTGATTCTGGCCTCAGAAAG AAACCCGGAAAAAGAAAAAATGAAAAGAATTTTTGAAAAAGTTGATAGATTGATAGCATGTTTGTGACATATTATCTTCC ATCATAATCATTTCTGAAACAGCTACTCGAAGAAAGCTATTCCCCGCAGAATTGATATTAACTTCAGAATCAATTGTAGA AGAGTTTTCAAACATTCTCTAAGATTAATGGTTTTTAGTTCATTTTGTGCAGTGGTTTGAAGTGTTGGAAGGTTTACTGG GTCCATACTGGAAGGCCATTGGATTGGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTGTTATCCAGCTTATAGCTTGT GCAAGGTTTGAACTGAACTGAAATTCTTTTGATTATAGCCTGTATCTATTTAGATACTTGAAAGACAGTGAGATTTGTTC ACTTTTTTATGTATCGGCTTATTTTTCTCCGGCTTAATCCAGTTTTTGGTCCCTACCCTTTGTCATAAATATGGCTTTAG TCCCTCGCCGGAGCAAAGGTGGTGATTGGTCCCCAATTTTTTGCAAAATAGTTGCCTTTGATCCTTCCGGCCGGTTGGGT CAACGCCGGAGCTCCGCCAGCTGACGAGCCACGTCAATTAATGAAGTCCAGGTGGCTTTTTTTCATTTAAATTCTAAAAA AAATATAATTAAAACCCTTAATTAAATCCTTCATTTAATTAAAAAAAATCATTGTTCATCTTCTGGATTCATCCACACAT CTCTCATCATCATCATCTTTCACCATCATCAACATCCTCCCCTCTTCGTTCAACCCCCCCCCCCTCTCCCCCTGGGTTTC GATCTGCCTCAGCTTGGTGGTGTTTCTAGGTTCGTCGTCGTTCTTTTTTCTTTCATATCTGTAGTGTGGGTATGGTCTCG GTGGGTTGGGGTTATGGGTTTTGGGGGTGGGAATTTCGATGGCCGTGGTGGGTGGGGATTATGGGTGTGGTGGATATGGG TTGCGGTGGGTGGAGAAAAGGGGGCCAGATCTAGAGGAGGAGGAAGAAGATGAAAGGGAAGCTAGGGTTTAAAGTGTGCT TCTTGAGGCCTTGAATTCATATTGCATTATTTTCTGTAATTGCTGCAGACTGAGGCGGAAGTTTGCTGCAGAAATTGGGT TCTTTTGGTTTTTGATTGCTGTCATGTGTTTGGTGCCTTGTTGCGAGCCTACTGTTGGTTTGTTTACTTTGGGGGTTGGT TTAATGGTGCTATTTGCTAGTTTGTGTTTGGCAGCAACTGTGTCTGCATTTTATTTTTTCTTGGAATTTTTCTGGTAGAG GAGAAGGAGGAAGAAGAGGCTGGGAATATGGTTAAGATATGTATGGGGTTACTGGGTACAGTTAGGAGAATCTGGATTTT TTGTGTTTTTGAAATATCTGTTTTTTTTTTTGAAACTAGAAAAATCTAGGTTGAAGAAGATGATTAAGAAGATGTTGATA AGAAGATAGATGAGTTTTTTTTTTGAATTAATTAAGAAGGAAGTTAATTAGTGAGTAATTAGTTGTGTTTTAATTTTATT TTTTTTAAATGAAAAAGAAAAAAAAACCACCTCGACCTCATTAATTGACGTGGCAAGGCCACATCAGCTGGTGGAGCTCC GGCGTTGACTCAACCGGCCGGAAGGACCAAAGCCAACTATTTTGCAAAAAACTGGGGACCAATCCCCACCTTTGCTCCGG CGAGGGACTAAAGCCATATTTATGACAAAGGATAGGGACCAAAAACTGGATTAAGCCTTTTTCTCCCGAATCAATTTTGG TATCCAGAAGCTACTTACATGAGCTTCTTCGCAAAATTGCTTTTGACTTTTGAATCAATTTTAGAAAGATTTCCAAACAT GCAATTAAGAATTTGATTTGGATTTTTGTGGTATGCAGTAACATATACTACATAAATGATCACTTGGACAAGAGGACTTG GACTTACATATTTGGAGCTTGTTGTGCCACCACAGTGTTCATACCCTCATTCCATAACTACAGGATTTGGTCTTTCCTTG GCCTTGGCATGACCACATACACAGCTTGGTACTTGACCATTGCAGCTGTTGTTCATGGCCAGGTAACTTAAGCAAACATT ACCAAATACCAAGTACAACTTGTGGTCCCGATTTCTTGATCGAGGTCTCTGATACCAGTTGAGTGCAATGTAAATAAACT TCTGGGGGATAACTTTGCAGGTTGAAAATGTGAAACACACGGGCCCAAACAAATTGGTTTTGTATTTCACAGGCGCCACC AACATCCTCTACACTTTCGGCGGCCACGCCGTTACAGTGTAAGCACCAATTTTTTTTAATGTTTTAGCTTATTGGGTTAG ACAAAACAATCATGATAGTGTTCTTTATTGTCCTGAGACAATGAAACATCAAAGATAGTAGGAGAAGTTTATTGCACGGC CACTTTCTTCAATTGCAGCTTTTGCCTCCATTCTAATGAGGACCTTGTTGTGAATAAGACAAAACTGTTAAATGTGGCAC TTTTGAACACCCATTACACTAGTGTCTTGGCTCACAGTTATACTCTGCCTTTATCAATTAAAAGACTTCAAAGTTCAGAC CCCCCACTTGAACACTTGAACTTTATTCTTAGAACGTGAAGCCTCTTCATATTTTGCTTTTTCCCTAATAAATCATGTTC ATGTTTGTAAATCTTTCTACAATTGATTCTGAAGCTAGAATTAAGTAAGTTTCTGTGAGTAGCTTTTAGATTTCAAAATT GATTATGATGAAAGTAAAGTTAATTTAAACATGCTACATGATGTAGATTTACAATTTGCATCTATAAGATAACTTCATTT GTGATATTTAACTGCACAATGTGTAAATTTGTTAATCCAAACTTAGAATTGATAGATTGTTGGATGACTATATGTTCTTC AATATTTGTTAAGACTTTTTTGTATGATCTCTCTATGTTGCTTCTAGTATCACTATCATGGAAGTAGAAAAATAAGTGCG TAGTACTAAATTGTGCTATTCTTTAATTATCTTATTAAGAAATTCTCCACTTGTTTCTTTTCTAATATGATATCTTGATA TCAACTTTCTTGGAGAAATAAAACAATGGATTTATTTACTAGAAACAAGAAAGGGTGCAAATTCAGCTAGAAAACAATTA TTACATATTTGGACATATCCCAGAAATGACAGACCCAATTTCACTTTTGGATTTGGAGCATAGTGGTAAGAAAAAAGAAG GAAGTTGATTAAAAGAGCATAGCATAGCACATGGGTGATTTGAAGATATATGCTGATGTTGCAGTGTACACTAACATATT GCTGGACCATGTTACTATTACAGGGAAATCATGCATGCAATGTGGAAACCTCAGAAGTTCAAATATATCTATCTTTTTGC CACACTTTTTGTGTTCACCCTTACCCTACCATCTGCTATTGCTGTCTACTGGGCCTTTGGTGACCAACTCTTGGACCATT CCAATGCCTTCTCTCTTCTACCTCGCAATGGCTGGCGTGATGCTGGTGTCATCTTAATGCTCATTCACCAGGTCTATATA CATGTTTCTTTTTTCCTTTCCTTAAAATTGCTCATATACTAGATAAATAATTATTACTTTAAGAGCACCTTATGAATTGG GATTCCCTACAATCAGGGAATCCTATGGTTCATATGTATAAAGAGACTATTTTTAAGGTATAATTAACTCTTTAAGTCTG AGCTGTTTGATCAAGATCAGACTGTTAAAGACCCTTGACTACACCGAATGCAGGATTATCTGACTGCATGGAATCAAGGA TCACGACTTTAATTCAAATCCCCTACAATCAGAGAATCCTAAATTCAATGAAGTCAGGGAACTGCAGTCGTGCAGTCGTC TGATCAAAGATCCTACGGTTCAAGGTCCGAGCCGTCTACTCGGTGAGGACCCTTACTACAATGATTGTAGTATTCCCTGA CTGCAGGGAATCCGAGTCCATAAGACTTTAGACCTAGAGTCCTCAGCAGTCTCATTTTTTAGAAACTACAAAGTGTAGCT TACCGTACTTTGACTGCTTTCGATTTTGTGCTAACATCAACCCAAACATGCTATATTACAAGTGGGAAAATGAAGAAGTT TTAGAAACTTATGTATTTCTATTTCTATGTGAATATGGCAGTTTATCACCTTCGGATTTGCTTGTACCCCATTGTATTTT GTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATTTTTGAGGGCTCTAGCCAGGTTGCCTGTGGTGGTACC AATATGGTTTTTGGCCATTATTTTCCCATTCTTTGGCCCCATCAACTCTGCTGTGGGGGCTCTTCTGGTTAGCTTCACCG TCTATGTCATCCCTGCCTCCGCCCATATGCTTACTTATAGGTCTGCTTCTGCAAGACAGGTAAATATTGTCCCCATCTTT TGTAAACGAGGATTATATTGTCATTATTGTATATTGTCATTATTGTATATATTTACCTTCCTAGTTTAGGTTTCACATCT TATGTTTCAATAAATGAAAATTGCTTCTTTCACACCATAGTTATATACATTGTACCCTCACATATTTATTTCTTAAGGTA AAAATGGGATAAAGAAACTAAAGTTTCAATCTCTCCATTGTTCTAAGGGTGGGTGAATGAAAAGTCATAAAATATGATGC TTGTCTCATCCAACTGACTTTGTGTGTGTTTGAATACGAGTTGAGTGCAATGTGAACAAACTTTGTGCCTAATTCATAGG AGTTTCTCATTCACTTTTTGTCTTGAAATGCATGCTAACATTTGTTTGCACTAGTGCCGACAGATATCCAAAAATATTAT TAATTGAGTCCATAGTGAATTTCTCTTGTCCATTAATAAGATAAGTTAATAAGCACTATTGAGGCCTGTTCTAGTCAATG TGGTTTTTTTAATAATATGCTGCTCATGCATTCTATTCCAACCTGTAGCTAGCTTTAGTACTGCAATAAATTAAACTAGG TACTGTGTCTGTGTTTTATGTCCTCCCCAAAACCTAAGACCTTCCAGAGAAAGCTTTCAATGAATAGGGCTAGAATGGGA ATCCAGTACTGTCCATTTTTATGAGGTGATCTTAGAAGCATTTGGAAGAGCTTCTTTTTCATCACATACAATTTTGAAAC TCATAAGCTACACACAAAAGCTTCTCCTAAAAATTGATTTTGGCTTCAGAATCAATTGTAGAAACACTAAATGAGGTTCT TAAAACTCCTTCTGTGGTGTACATGTGTTTGAGGATATATACAGCTTCATGATTTAACTTGGAAGTGGCTTCCTATGTCA CTGGCAGTACAAGTCCCAGTCCCACCACCAATACTATGCTATGCTAACCATATGTCCCCTACATTTTAACAATGAGCTGG ACCATGGCCAACCGAAACACTCTTAAGTGGCCCTACTTAGTACTCAAGTTAATGTTCCTGTTCTAGCATGTTTCTAACAG TTCCTATTTTCTCAAAATTAATTTTGGCACCCAGAAGCTATTTAGATAAAAAAATTCCCAGCTGACACTGCTTTTATCTC ATGTTCATTTTCAGAATGCTGCAGAGAAATTGCCCTTCTTCATCCCAAGCTGGACTGCAATGTTTGTGTTCAATGCATTT GTGGTGGTATGGGTTACTGTAGTAGGCTTTGGATTTGGAGGGTGGGCTAGCATGACAAACTTCATCAAGCAGGTTGACAC ATTTGGACTGTTTGCCAAGTGCTACCAATGCCCACCAAAACTCTCAGCTTCCAACCATACACTGCACCACTGA
CDS sequence (LotjaGi1g1v0079200.10) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTACCCCAGAAGCAAGGTGAAGAAACCATGATGTCAAGCCTGAATGAGGCGATTGAGCATGGCGAAAGAGAGGAAGA GAATGAAGGTGGTGGTTCAGGGCTGAAGAACTTTCTCTGGCATGGTGGCTCTGTTTATGATGCCTGGTTCAGCTGTGCTT CAAATCAGGTTGCACAGGTTCTGTTAACACTGCCATACTCTTTCTCTCAACTTGGAATGCTTTCAGGAATCATTTTCCAA ATCTTCTATGGCTTGCTTGGTAGCTGGACTGCTTATTTGATTAGTATTCTGTATATTGAGTACAGAACCAGAAAAGAGAA AGAGAATGTTAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGTTGGAAGGTTTACTGGGTCCATACTGGAAGGCCA TTGGATTGGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTGTTATCCAGCTTATAGCTTGTGCAAGTAACATATACTAC ATAAATGATCACTTGGACAAGAGGACTTGGACTTACATATTTGGAGCTTGTTGTGCCACCACAGTGTTCATACCCTCATT CCATAACTACAGGATTTGGTCTTTCCTTGGCCTTGGCATGACCACATACACAGCTTGGTACTTGACCATTGCAGCTGTTG TTCATGGCCAGGTTGAAAATGTGAAACACACGGGCCCAAACAAATTGGTTTTGTATTTCACAGGCGCCACCAACATCCTC TACACTTTCGGCGGCCACGCCGTTACAGTGGAAATCATGCATGCAATGTGGAAACCTCAGAAGTTCAAATATATCTATCT TTTTGCCACACTTTTTGTGTTCACCCTTACCCTACCATCTGCTATTGCTGTCTACTGGGCCTTTGGTGACCAACTCTTGG ACCATTCCAATGCCTTCTCTCTTCTACCTCGCAATGGCTGGCGTGATGCTGGTGTCATCTTAATGCTCATTCACCAGTTT ATCACCTTCGGATTTGCTTGTACCCCATTGTATTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATT TTTGAGGGCTCTAGCCAGGTTGCCTGTGGTGGTACCAATATGGTTTTTGGCCATTATTTTCCCATTCTTTGGCCCCATCA ACTCTGCTGTGGGGGCTCTTCTGGTTAGCTTCACCGTCTATGTCATCCCTGCCTCCGCCCATATGCTTACTTATAGGTCT GCTTCTGCAAGACAGAATGCTGCAGAGAAATTGCCCTTCTTCATCCCAAGCTGGACTGCAATGTTTGTGTTCAATGCATT TGTGGTGGTATGGGTTACTGTAGTAGGCTTTGGATTTGGAGGGTGGGCTAGCATGACAAACTTCATCAAGCAGGTTGACA CATTTGGACTGTTTGCCAAGTGCTACCAATGCCCACCAAAACTCTCAGCTTCCAACCATACACTGCACCACTGA
Protein sequence (LotjaGi1g1v0079200.10) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPQKQGEETMMSSLNEAIEHGEREEENEGGGSGLKNFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQ IFYGLLGSWTAYLISILYIEYRTRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYY INDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVENVKHTGPNKLVLYFTGATNIL YTFGGHAVTVEIMHAMWKPQKFKYIYLFATLFVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRNGWRDAGVILMLIHQF ITFGFACTPLYFVWEKVIGMHDTKSIFLRALARLPVVVPIWFLAIIFPFFGPINSAVGALLVSFTVYVIPASAHMLTYRS ASARQNAAEKLPFFIPSWTAMFVFNAFVVVWVTVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKLSASNHTLHH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 76 | 76 | - | – | |
| PANTHER | 3 | 462 | 460 | 7.4E-261 | – | |
| PANTHER | 3 | 462 | 460 | 7.4E-261 | – | |
| Pfam | 41 | 434 | 394 | 1.3E-78 | ||
| Phobius | 77 | 99 | 23 | - | – | |
| TMHMM | 77 | 99 | 23 | - | – | |
| Phobius | 100 | 135 | 36 | - | – | |
| Phobius | 136 | 158 | 23 | - | – | |
| TMHMM | 138 | 160 | 23 | - | – | |
| Phobius | 159 | 169 | 11 | - | – | |
| Phobius | 170 | 188 | 19 | - | – | |
| TMHMM | 170 | 187 | 18 | - | – | |
| Phobius | 189 | 194 | 6 | - | – | |
| TMHMM | 192 | 214 | 23 | - | – | |
| Phobius | 195 | 218 | 24 | - | – | |
| Phobius | 219 | 229 | 11 | - | – | |
| TMHMM | 229 | 251 | 23 | - | – | |
| Phobius | 230 | 252 | 23 | - | – | |
| Phobius | 253 | 263 | 11 | - | – | |
| Phobius | 264 | 288 | 25 | - | – | |
| TMHMM | 264 | 286 | 23 | - | – | |
| Phobius | 289 | 309 | 21 | - | – | |
| Phobius | 310 | 334 | 25 | - | – | |
| TMHMM | 312 | 334 | 23 | - | – | |
| Phobius | 335 | 345 | 11 | - | – | |
| Phobius | 346 | 370 | 25 | - | – | |
| TMHMM | 354 | 371 | 18 | - | – | |
| Phobius | 371 | 375 | 5 | - | – | |
| TMHMM | 376 | 398 | 23 | - | – | |
| Phobius | 376 | 397 | 22 | - | – | |
| Phobius | 398 | 417 | 20 | - | – | |
| TMHMM | 411 | 433 | 23 | - | – | |
| Phobius | 418 | 442 | 25 | - | – | |
| Phobius | 443 | 477 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0079200.10, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…