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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0079200 |
| Transcript ID | LotjaGi1g1v0079200.11 |
| Related isoforms 10 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Auxin transporter-like protein 2; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1; TrEMBL-Plants: tr|V7B7B9|V7B7B9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0079200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:11421564..11425718) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTACCCCAGAAGCAAGGTGAAGAAACCATGATGTCAAGCCTGAATGAGGCGATTGAGCATGGCGAAAGAGAGGAAGA GAATGAAGGTGGTGGTTCAGGGCTGAAGAACTTTCTCTGGCATGGTGGCTCTGTTTATGATGCCTGGTTCAGCTGTGCTT CAAATCAGGTAGTGAGATATGGGGTTTGTGAATTGTGAGTGCTGGTCTAATCATTGGAAGTGAGATTCTGTGACCCTTTT TTGGTGTGTGTGAGGGAATTTGATTCGTTTTTGGGTTTGTGCTGTGCAGGTTGCACAGGTTCTGTTAACACTGCCATACT CTTTCTCTCAACTTGGAATGCTTTCAGGAATCATTTTCCAAATCTTCTATGGCTTGCTTGGTAGCTGGACTGCTTATTTG ATTAGTATTCTGTATATTGAGTACAGAACCAGAAAAGAGAAAGAGAATGTTAGCTTCAAAAACCATGTCATTCAGGTTGG TTGCTTACAACATATTTGAATCAGCTTTTTTTCCTCAATCAATTCTGAACTCCGACTTAATTGATTCTGGCCTCAGAAAG AAACCCGGAAAAAGAAAAAATGAAAAGAATTTTTGAAAAAGTTGATAGATTGATAGCATGTTTGTGACATATTATCTTCC ATCATAATCATTTCTGAAACAGCTACTCGAAGAAAGCTATTCCCCGCAGAATTGATATTAACTTCAGAATCAATTGTAGA AGAGTTTTCAAACATTCTCTAAGATTAATGGTTTTTAGTTCATTTTGTGCAGTGGTTTGAAGTGTTGGAAGGTTTACTGG GTCCATACTGGAAGGCCATTGGATTGGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTGTTATCCAGCTTATAGCTTGT GCAAGGTTTGAACTGAACTGAAATTCTTTTGATTATAGCCTGTATCTATTTAGATACTTGAAAGACAGTGAGATTTGTTC ACTTTTTTATGTATCGGCTTATTTTTCTCCGGCTTAATCCAGTTTTTGGTCCCTACCCTTTGTCATAAATATGGCTTTAG TCCCTCGCCGGAGCAAAGGTGGTGATTGGTCCCCAATTTTTTGCAAAATAGTTGCCTTTGATCCTTCCGGCCGGTTGGGT CAACGCCGGAGCTCCGCCAGCTGACGAGCCACGTCAATTAATGAAGTCCAGGTGGCTTTTTTTCATTTAAATTCTAAAAA AAATATAATTAAAACCCTTAATTAAATCCTTCATTTAATTAAAAAAAATCATTGTTCATCTTCTGGATTCATCCACACAT CTCTCATCATCATCATCTTTCACCATCATCAACATCCTCCCCTCTTCGTTCAACCCCCCCCCCCTCTCCCCCTGGGTTTC GATCTGCCTCAGCTTGGTGGTGTTTCTAGGTTCGTCGTCGTTCTTTTTTCTTTCATATCTGTAGTGTGGGTATGGTCTCG GTGGGTTGGGGTTATGGGTTTTGGGGGTGGGAATTTCGATGGCCGTGGTGGGTGGGGATTATGGGTGTGGTGGATATGGG TTGCGGTGGGTGGAGAAAAGGGGGCCAGATCTAGAGGAGGAGGAAGAAGATGAAAGGGAAGCTAGGGTTTAAAGTGTGCT TCTTGAGGCCTTGAATTCATATTGCATTATTTTCTGTAATTGCTGCAGACTGAGGCGGAAGTTTGCTGCAGAAATTGGGT TCTTTTGGTTTTTGATTGCTGTCATGTGTTTGGTGCCTTGTTGCGAGCCTACTGTTGGTTTGTTTACTTTGGGGGTTGGT TTAATGGTGCTATTTGCTAGTTTGTGTTTGGCAGCAACTGTGTCTGCATTTTATTTTTTCTTGGAATTTTTCTGGTAGAG GAGAAGGAGGAAGAAGAGGCTGGGAATATGGTTAAGATATGTATGGGGTTACTGGGTACAGTTAGGAGAATCTGGATTTT TTGTGTTTTTGAAATATCTGTTTTTTTTTTTGAAACTAGAAAAATCTAGGTTGAAGAAGATGATTAAGAAGATGTTGATA AGAAGATAGATGAGTTTTTTTTTTGAATTAATTAAGAAGGAAGTTAATTAGTGAGTAATTAGTTGTGTTTTAATTTTATT TTTTTTAAATGAAAAAGAAAAAAAAACCACCTCGACCTCATTAATTGACGTGGCAAGGCCACATCAGCTGGTGGAGCTCC GGCGTTGACTCAACCGGCCGGAAGGACCAAAGCCAACTATTTTGCAAAAAACTGGGGACCAATCCCCACCTTTGCTCCGG CGAGGGACTAAAGCCATATTTATGACAAAGGATAGGGACCAAAAACTGGATTAAGCCTTTTTCTCCCGAATCAATTTTGG TATCCAGAAGCTACTTACATGAGCTTCTTCGCAAAATTGCTTTTGACTTTTGAATCAATTTTAGAAAGATTTCCAAACAT GCAATTAAGAATTTGATTTGGATTTTTGTGGTATGCAGTAACATATACTACATAAATGATCACTTGGACAAGAGGACTTG GACTTACATATTTGGAGCTTGTTGTGCCACCACAGTGTTCATACCCTCATTCCATAACTACAGGATTTGGTCTTTCCTTG GCCTTGGCATGACCACATACACAGCTTGGTACTTGACCATTGCAGCTGTTGTTCATGGCCAGGTAACTTAAGCAAACATT ACCAAATACCAAGTACAACTTGTGGTCCCGATTTCTTGATCGAGGTCTCTGATACCAGTTGAGTGCAATGTAAATAAACT TCTGGGGGATAACTTTGCAGGTTGAAAATGTGAAACACACGGGCCCAAACAAATTGGTTTTGTATTTCACAGGCGCCACC AACATCCTCTACACTTTCGGCGGCCACGCCGTTACAGTGTAAGCACCAATTTTTTTTAATGTTTTAGCTTATTGGGTTAG ACAAAACAATCATGATAGTGTTCTTTATTGTCCTGAGACAATGAAACATCAAAGATAGTAGGAGAAGTTTATTGCACGGC CACTTTCTTCAATTGCAGCTTTTGCCTCCATTCTAATGAGGACCTTGTTGTGAATAAGACAAAACTGTTAAATGTGGCAC TTTTGAACACCCATTACACTAGTGTCTTGGCTCACAGTTATACTCTGCCTTTATCAATTAAAAGACTTCAAAGTTCAGAC CCCCCACTTGAACACTTGAACTTTATTCTTAGAACGTGAAGCCTCTTCATATTTTGCTTTTTCCCTAATAAATCATGTTC ATGTTTGTAAATCTTTCTACAATTGATTCTGAAGCTAGAATTAAGTAAGTTTCTGTGAGTAGCTTTTAGATTTCAAAATT GATTATGATGAAAGTAAAGTTAATTTAAACATGCTACATGATGTAGATTTACAATTTGCATCTATAAGATAACTTCATTT GTGATATTTAACTGCACAATGTGTAAATTTGTTAATCCAAACTTAGAATTGATAGATTGTTGGATGACTATATGTTCTTC AATATTTGTTAAGACTTTTTTGTATGATCTCTCTATGTTGCTTCTAGTATCACTATCATGGAAGTAGAAAAATAAGTGCG TAGTACTAAATTGTGCTATTCTTTAATTATCTTATTAAGAAATTCTCCACTTGTTTCTTTTCTAATATGATATCTTGATA TCAACTTTCTTGGAGAAATAAAACAATGGATTTATTTACTAGAAACAAGAAAGGGTGCAAATTCAGCTAGAAAACAATTA TTACATATTTGGACATATCCCAGAAATGACAGACCCAATTTCACTTTTGGATTTGGAGCATAGTGGTAAGAAAAAAGAAG GAAGTTGATTAAAAGAGCATAGCATAGCACATGGGTGATTTGAAGATATATGCTGATGTTGCAGTGTACACTAACATATT GCTGGACCATGTTACTATTACAGGGAAATCATGCATGCAATGTGGAAACCTCAGAAGTTCAAATATATCTATCTTTTTGC CACACTTTTTGTGTTCACCCTTACCCTACCATCTGCTATTGCTGTCTACTGGGCCTTTGGTGACCAACTCTTGGACCATT CCAATGCCTTCTCTCTTCTACCTCGCAATGGCTGGCGTGATGCTGGTGTCATCTTAATGCTCATTCACCAGGTCTATATA CATGTTTCTTTTTTCCTTTCCTTAAAATTGCTCATATACTAGATAAATAATTATTACTTTAAGAGCACCTTATGA
CDS sequence (LotjaGi1g1v0079200.11) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTACCCCAGAAGCAAGGTGAAGAAACCATGATGTCAAGCCTGAATGAGGCGATTGAGCATGGCGAAAGAGAGGAAGA GAATGAAGGTGGTGGTTCAGGGCTGAAGAACTTTCTCTGGCATGGTGGCTCTGTTTATGATGCCTGGTTCAGCTGTGCTT CAAATCAGGTTGCACAGGTTCTGTTAACACTGCCATACTCTTTCTCTCAACTTGGAATGCTTTCAGGAATCATTTTCCAA ATCTTCTATGGCTTGCTTGGTAGCTGGACTGCTTATTTGATTAGTATTCTGTATATTGAGTACAGAACCAGAAAAGAGAA AGAGAATGTTAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGTTGGAAGGTTTACTGGGTCCATACTGGAAGGCCA TTGGATTGGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTGTTATCCAGCTTATAGCTTGTGCAAGTAACATATACTAC ATAAATGATCACTTGGACAAGAGGACTTGGACTTACATATTTGGAGCTTGTTGTGCCACCACAGTGTTCATACCCTCATT CCATAACTACAGGATTTGGTCTTTCCTTGGCCTTGGCATGACCACATACACAGCTTGGTACTTGACCATTGCAGCTGTTG TTCATGGCCAGGTTGAAAATGTGAAACACACGGGCCCAAACAAATTGGTTTTGTATTTCACAGGCGCCACCAACATCCTC TACACTTTCGGCGGCCACGCCGTTACAGTGGAAATCATGCATGCAATGTGGAAACCTCAGAAGTTCAAATATATCTATCT TTTTGCCACACTTTTTGTGTTCACCCTTACCCTACCATCTGCTATTGCTGTCTACTGGGCCTTTGGTGACCAACTCTTGG ACCATTCCAATGCCTTCTCTCTTCTACCTCGCAATGGCTGGCGTGATGCTGGTGTCATCTTAATGCTCATTCACCAGATA AATAATTATTACTTTAAGAGCACCTTATGA
Protein sequence (LotjaGi1g1v0079200.11) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPQKQGEETMMSSLNEAIEHGEREEENEGGGSGLKNFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQ IFYGLLGSWTAYLISILYIEYRTRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYY INDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVENVKHTGPNKLVLYFTGATNIL YTFGGHAVTVEIMHAMWKPQKFKYIYLFATLFVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRNGWRDAGVILMLIHQI NNYYFKSTL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 76 | 76 | - | – | |
| PANTHER | 3 | 327 | 325 | 1.7E-181 | – | |
| PANTHER | 3 | 327 | 325 | 1.7E-181 | – | |
| Pfam | 41 | 323 | 283 | 4.6E-55 | ||
| Phobius | 77 | 99 | 23 | - | – | |
| TMHMM | 77 | 99 | 23 | - | – | |
| Phobius | 100 | 135 | 36 | - | – | |
| Phobius | 136 | 158 | 23 | - | – | |
| TMHMM | 138 | 160 | 23 | - | – | |
| Phobius | 159 | 169 | 11 | - | – | |
| Phobius | 170 | 188 | 19 | - | – | |
| TMHMM | 170 | 187 | 18 | - | – | |
| Phobius | 189 | 194 | 6 | - | – | |
| TMHMM | 192 | 214 | 23 | - | – | |
| Phobius | 195 | 218 | 24 | - | – | |
| Phobius | 219 | 229 | 11 | - | – | |
| TMHMM | 229 | 251 | 23 | - | – | |
| Phobius | 230 | 252 | 23 | - | – | |
| Phobius | 253 | 263 | 11 | - | – | |
| TMHMM | 264 | 286 | 23 | - | – | |
| Phobius | 264 | 287 | 24 | - | – | |
| Phobius | 288 | 306 | 19 | - | – | |
| Phobius | 307 | 325 | 19 | - | – | |
| Phobius | 326 | 329 | 4 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0079200.11, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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