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LotjaGi1g1v0274400.2

Overview

Field Value
Gene ID LotjaGi1g1v0274400
Transcript ID LotjaGi1g1v0274400.2
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Alcohol dehydrogenase; TAIR: AT1G77120.1 alcohol dehydrogenase 1; Swiss-Prot: sp|P13603|ADH1_TRIRP Alcohol dehydrogenase 1; TrEMBL-Plants: tr|Q684J9|Q684J9_LOTJA Alcohol dehydrogenase; Found in the gene: LotjaGi1g1v0274400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:67239682..67246683) extracted from Lotus japonicus Gifu genome v1.2.

AAAAACTCTTACATGAGGGAACGTGTTAAAATATAATATAAAATAATTCATTTAACCCTTAATAGCTTAATCTTTTTGAA TATTTGTGTTTCAGTGTTTTACAAAGAATATGTATTCTTTCAAATCACGGTTTTATTTTTTTTAACAGAAATGACGGTTT TATTAAAACATCCTTATCCCCCCTTTTAATCATTAAATTAATGGGTTTGAAGTTAAATTCCACAAATTGAACAAGGATAA GTTGCCAAGACGCTATAGGAAAAGGAAAAACAAGGACAAAGGGAAAGAAGAACTAGACAAAGTTACAACTTGAGTAATTA TTATGTTATTGCCACTTGATGGTGCCCCACAATTGTGATTAGGAAGTCCCTAAACAACCATAAAAAAAAAAAGGAAGTTC CTAAACAAGGAAAAGAAAAATCAGAGAAAACTAACTAGCCACTTGTGTAATACCATTTGATTAGGAATTTCCTAAACAAG GAAGGAAGGAAGAAACTAGAAACCAGCAATAGTTTTACAACGTGGCTGGCTATGTGTCCTAAACCTTAAGGCGCCGCTTG GAAATAAAACAAGAGCAGGGATAGCGGTATTCTTATTCTACACAGTACGTTTGTTTGTTTTAAAAATCCATTTTTCGGTG GTTTAGTTTCTCCTTCTATCTCTATAAATAACCTTCACGGACTCACAGTTTCTTCCACAAACAAATACCATTCATTACCA GCTCACTCATCAATTCATTCTCAGTTCATCTTAATTTCTGAAAGCTATAGCTATGTCGACCACAGCTGGTCAAGTCATCA AATGCAGAGGTCAGTGACACAATCATCATCCACTCTAATCTTTCCTTCTGTTCTGTTTTGATCTATCTATCTATCTGCTA CCTGCTCTATTTCTAGTTTACTTATTTTACTTTATAGGAATTGATTTTTCAGGTTTACACTAAAACTAACTATGATCATC ATTCATCAATATCTAATCTTCTAACTAATCTAATTTCTGGATCAGACATGTTCTTCACACTTTTTTATGGCCACTTAAAC TCTTGATGGCTACTTAACTTCAAATGTTTAACAAAGTTTTGATCTATTTCGCTGATTTTTTATTCTATCCAGAAAATTTT TAAAACCCTTTCCCTCTTTTTAGATCCTTCTCTGTATAAATAGAAAATTATAAATTTTGTTGAGCACTGTTTCTTATTGT TGAATATTCGAGGGTATGGCTATAAATTCAGTGATAATGTGTTGCTAACTGTGTGTCTTGGTTGATTTGTTGGAACTTGG AAATGTACTAGCCGCGGTTTCATGGGAGGCAGGGAAGCCACTAGTGATTGAAGAAGTGGAGGTGGCGCCGCCGCAGGCCG GTGAAGTGCGTCTGAAGATACTCTACACCTCCCTTTGCCACACTGATGTTTACTTCTGGGAAGCTAAGGTAACAAACAAT AAACTTGCATTACCCACTCTACATTCTATTTATATTTAGCTCAAGTTGTTTAATATGATCTTCATTTTCCCCTTGTTTCA GGGTCAGACTCCATTGTTTCCTCGGATATTTGGTCATGAAGCTGGAGGGTATGTTTCTCTTCTGAGTATAGCACACAATC ACATATCATAAATCTATGCCTTTTTGATACATTTGTTTGAACATGAAATACTTTTGGTTAAACCTTACTAAAAATGTTGG CATGATGTTATTCAGCATTGTGGAGAGCGTAGGCGAAGGTGTGACTCATCTGAAACCAGGGGACCATGCTCTCCCAGTAT TCACAGGAGAATGTGGTGAATGCCCACATTGCAAATCAGAGGAGAGCAACATGTGTGATCTTCTTAGGATCAACACTGAT AGGGGTGTCATGATCAGTGACAACCAGAGTAGATTCTCCATAAAAGGAAAACCCATATACCATTTTGTTGGTACCTCAAC ATTCAGTGAATACACAGTTCTCCATGCTGGATGTGTTGCAAAGATCAACCCTGCTGCCCCACTTGACAAAGTTTGTATTC TCAGTTGTGGAATATGCACAGGTTTTGGTGCTACTGTCAATGTTGCAAAACCAAAACCTGGTTCTTCTGTTGCCATCTTT GGACTTGGAGCTGTTGGCCTTGCTGTATGTTACCTTGCCTTTTGCTTTTGTGTGTGCATGTGTTATACTTATACTTTTTA TAGCAACTCATAGAGGCTAATATTGACAAAAAATTTAGGCTGCTGAAGGGGCAAGGGTTTCTGGTGCATCAAGAATCATT GGGGTTGATTTAGTTTCCAGCCGATTTGAAGGAGGTAAAATGTTTTCTTCTTCTTCCATACAAAATGCTTGAAGATTCAG CTCAACATAAATGAAGTGGATATTCAATTCTTGATTGTATTTCTGGTTTTATTCTTGTTGGCAGCCAAGAAGTTTGGAGT CAATGAGTTCGTGAACCCAAAAGATCACGACAAACCTGTACAAGAGGTTAATTCATTGAAAATTTCATATTATGTTATAT TTACGTTGACTTAAAGCTATGCTTTTCCAACTTATACTTTCACATTCTGATGCTATGAATTAAAAATGTGAATGCTGGTG TGCAGGTAATTGCTGAAATGACCAATGGAGGTGTGGATCGTGCTGTTGAATGCACTGGCAGCATCCAGGCCATGATCTCT GCATTTGAATGTGTCCATGATGTATGCGAAAGCAGAACTCTTTTATTCTATGTTGCTGAAGAGTTCCTATAAACCAAGGC CTAATCTTGATTGATTTCTTCTTCTTTTTCACAGGGTTGGGGTGTTGCTGTACTTGTTGGAGTGCCAAACAAAGATGATG CATTCAAAACTCATCCTGTGAATTTCTTGAATGAGAGGACTCTTAAGGGCACCTTCTATGGCAACTACAAACCCCGCACT GATCTTCCTAATGTTGTAGAGATGTACATGAGAGGGGTAATTAAGCTTATAAAATGATTTTCCTAAAGTCATTCAAGTAG AACTAGTACAATTTTGTTGCTAAGCATCTTATGGTGATACTTTTGCAGGAACTTGAACTGGAGAAATTCATCACCCACAC AGTTTCGTTCTCTGAGATTAACAAAGCTTTTGATTACATGCTGAAAGGAGAGTCCATCAGATGCATCATCCGCATGGAGG AGTAAAACCCAAAAACAATGATGTGTGAGTCCCTATTTGGGGACTGAGTTCTCTTTCTGGTTGTGAAAGAAAAAAGGCAT ATATAAATAATCCCTTAGGAGGATTATGAAATTTGTGATGTTTGAATGTATAGAATGGCAGGGCCTTTGCTTCTGGGCTT GTCTAATACAGAATAAATAAAATGTGGCTTTTTTCAATTTGCTGCTGTTCTAGTTAATAATTTATTTTCATCATTCTAAA GTTAAAACGTTGTCTGAGGTTAATAATCTAAAGTTAAACGGAGAGCTTCGTTTTGACTATTTGCAAGGTTAATAATCTAA GAACTGGTGCTGTCTTTGATATTTAGGAGTCTAGGAGCTTGTGTGAAAGTTTGTAAATTGCATTTGAAGATGTTTATAAG GGTGAAGTCTGGATAGCTTTATGCAACAAGATGGGGAATATTTTAAGATGCAATTAGATTAAATGTATACTTCAATCATC CAAGGATTGGCACAGGAACATTACAGTTCTAGTATCTTTGTTTAGCATAAACATTGGTTCCACAGATGAATTCTCAAGTT AAAAGGGATCAGTGCTTATAATGTTTACAGTTGAATTTGAAAACAACATCAATTAATACAAAGACTAAATGTAGCTATAT GTTACCAGCTTTGATGTTAATTTGCTCCATCTTTTGGTAGCAAATATGAGAAGAGAATTTCGTTCCACATATCAGGAACA CCAGGTAGACACCAATGACTGCAATCTGGCACAGATGGCTTGTCACTCCATGTACCCACATGTCCATCACTCCTATATGC TCCCATGGGTGTAACATGCAGAACTGTCACAGGAACAGTCATTTTTTTTCACAACTCTGTTGATCATGTCTGAAATTGGA CTCTTGTCCCTGCCATTTGTTCTCTTCCAAGGCCTTCGGGCCACCTTGCAAGCGTGGCGGTTCTGTCCACTGCCACAAAG ATAAGCATATTAATAGCATGTTTGACTAACTTCTCTTTCCACAGAATCAATTTTGAAATCCAAAAGCTATTCACATAAGT TTCTCACTAGAATTGATTCTTAATTGCAGAAAGATTTCCAAACATGCTATAAGCCTTAACTCTTATAGTTCACACTTTGC GCCTACCATTAAGTTTGATGGCCCTTGTGTTGCCAAGAGAATAGAGAAATAAACCCTTAATTTGGTTATGTTTAGTCATT GTCTCATCTATAAACTTGCAAAACAAATAGATAAAAATGGTGTTAAAACTTACCTCCAGTGAGATGATTCAAAGGTACGG AAGAATACTCTTGTCCTGTTTGTGTTAATTGTATTCTCTACCCAAGAGGCCCAGGTGAGTAAAGCTGTGTTGAAAGCAGA ATTAATTGGCATTCCAAGCTTCAGTGAGTTACCAACCTGAAAGTACCAGCCCCTGGCTGAAGAGCATGTTAGTAGCAATA GTAGACATTCTTCAAGAAAAGTTTAGGCTAGTCATGTAGGGAAAACTAACACATATATTAGTTATACATGAATATCCAAA CATTTTCACGTCTGGCTAACTCCGTGGATGTTTGGATACACGGTGCAAAATCAACGTTAAGCCAAAATCATGGTGGAACG CCACAAAAACTAAGGACTCACAGTTTCTTCCACAAACAAATACAAATTTATTACCAGCTCACTCATCAAATCATATTCTC AGTTCATCTTAATTTGTGAAAGCTAGCTATGTCGAGCACAGATGGTCAGGTCATCAAATGCAGAGGTCAGTGACACAATC ATCATCCACTCTAATCTTTCCTTCTGTTCTGTTTTGATCTATCTATCTATCTATCTGCTACCTGCTCTATTTCTAGTTTA CTTATTTTACTTTATAGGCATTGATTTTTCGGGTTTACACTAAAACTAACTATTATCATCATTCATCAATATCTAATCTT CTAACTAATCTAATTTCTGGATGGGACATATTCTTCACACTTTTTATGGCTAATTAAACTCCATTTAGCTTCAAATGTTG AACAAAGTTTTGATCTATTTAGCTGATTTTTCTTCTGTATCCAGAAAATTTTAATTCCCTTTTTTCTGATCCTTCTGAGT AAATAAAGAAAATTGTAAATTCTGTTAGTTAACTGTTTCTGATCCTTCTGTATTGCTAATGGAATGAATGAATGTCCTGT TTTGAAATGTACTAGCTGCGGTTTCATGGGAGGCGGGGAAGCCGCTTGTGATTGAAGAAGTGGAGGTGGCGCCACCGCAA GCCGGAGAAGTGCGTCTCAAGATACTCTACACATCCCTCTGCCACACTGATGTTTACTTCTGGGAAGCTAAGGTAACAAA CAACACACTTGCATTACTCACTCAACATTCTGTTTATATTTAGCTCAAGTTTAACATAGATCTTCATTTTCCCATTGTTT CAGGGTCAGACTCCATTGTTTCCTCGTATATTTGGTCATGAAGCTGGAGGGTATGTTTCTCTTTTGAATATAACACTTGT GCACACAATTAATGATTATAAATCCTTGCCTTTTTGATAAATTTGGTTCATATTTCTTAAGTTTATATGGTTTCAACATG GAATGCTTTTGGTTAAACCTTACTAATAATGTTGTTATGATGTTATTCAGCATTGTGGAGAGTGTAGGCGAAGGTGTTAC TCATCTGAAACCAGGGGACCATGCTCTCCCAGTATTCACAGGAGAATGTGGTGAATGCCCACATTGCAAATCAGAGGAGA GCAACATGTGTGATCTTCTTAGGATCAACACTGATAGGGGTGTCATGATCAGTGACAACCAGAGTAGATTCTCCATAAAA GGAAAACCCATATACCATTTTGTTGGTACCTCAACATTCAGTGAATACACAGTTCTTCATGCTGGATGTGTTGCAAAGAT CAACCCTGCTGCCCCACTTGACAAAGTTTGTATTCTCAGTTGTGGAATATGCACAGGTTTTGGTGCCACTGTCAATGTTG CAAAACCAAAACCTGGTTCTTCTATTGCCATCTTTGGACTTGGAGCTGTTGGCCTTGCTGTATGTTCCCCTTATGCCTTT TGCTTTTGTGTGTGCATATGTTATACTTATACTTTTTACAGCAACTTATAAAGGCTAATATTGACTTGAAATTTAGGCTG CGGAAGGGGCAAGGATTTCTGGTGCATCAAGAATCATTGGGGTTGATTTAGTTTCCAGCCGATTTGAAGAAGGTAAACTG ATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATACAAATGCTTGAAGATTCAGCTCAACA TAAATGAAGTGGATATTCAATTATTGATTGTATTTCTGGTTTTATTATTGTTGGCAGCCAAGAAGTTTGGAGTCAATGAG TTCGTGAACCCAAAAGATCACGACAAACCTGTACAAGAGGTTAATTCATTGATAATTTCATATTATTTGTTATAGTTATG TTGTCTTAAAGCAATGCTTTTCCAGTTTAGACTTTCATATTCTGATGCTATGAATTAAAAATGTGAATGCTGGTGTGTAG GTAATTGCTGAAATGACCAATGGAGGTGTGGATCGGGCTGTTGAATGCACTGGCAGCATCCAGGCCATCTGCATTCGAAT GTGTCCATGATGTACGTAAAAGCAGAACTCTTATATCTTTGTTGCTAAAGAGTTTATATAAACCAAGGCCTAATCTTGAT TGATTTCTTCTTCTTTTGTTCAGGGTTGGGGTGTTGCTGTACTTGTTGGAGTGCCAAACAAAGATGATGCATTCAAAACT CATCCTGTGAATTTCTTGAATGAGAGGACACTTAAGGGCACCTTCTATGGCAACTACAAACCCCGCACTGATCTTCCTAA TGTCGTGGAGAAGTACATGAAAGGGGTAAGTAACCTTATAAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0274400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCGACCACAGCTGGTCAAGTCATCAAATGCAGAGCCGCGGTTTCATGGGAGGCAGGGAAGCCACTAGTGATTGAAGA AGTGGAGGTGGCGCCGCCGCAGGCCGGTGAAGTGCGTCTGAAGATACTCTACACCTCCCTTTGCCACACTGATGTTTACT TCTGGGAAGCTAAGGGTCAGACTCCATTGTTTCCTCGGATATTTGGTCATGAAGCTGGAGGCATTGTGGAGAGCGTAGGC GAAGGTGTGACTCATCTGAAACCAGGGGACCATGCTCTCCCAGTATTCACAGGAGAATGTGGTGAATGCCCACATTGCAA ATCAGAGGAGAGCAACATGTGTGATCTTCTTAGGATCAACACTGATAGGGGTGTCATGATCAGTGACAACCAGAGTAGAT TCTCCATAAAAGGAAAACCCATATACCATTTTGTTGGTACCTCAACATTCAGTGAATACACAGTTCTCCATGCTGGATGT GTTGCAAAGATCAACCCTGCTGCCCCACTTGACAAAGTTTGTATTCTCAGTTGTGGAATATGCACAGGTTTTGGTGCTAC TGTCAATGTTGCAAAACCAAAACCTGGTTCTTCTGTTGCCATCTTTGGACTTGGAGCTGTTGGCCTTGCTGCTGCTGAAG GGGCAAGGGTTTCTGGTGCATCAAGAATCATTGGGGTTGATTTAGTTTCCAGCCGATTTGAAGGAGCCAAGAAGTTTGGA GTCAATGAGTTCGTGAACCCAAAAGATCACGACAAACCTGTACAAGAGGTAATTGCTGAAATGACCAATGGAGGTGTGGA TCGGGCTGTTGAATGCACTGGCAGCATCCAGGCCATCTGCATTCGAATGTGTCCATGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0274400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSTTAGQVIKCRAAVSWEAGKPLVIEEVEVAPPQAGEVRLKILYTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVG EGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMISDNQSRFSIKGKPIYHFVGTSTFSEYTVLHAGC VAKINPAAPLDKVCILSCGICTGFGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARVSGASRIIGVDLVSSRFEGAKKFG VNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAICIRMCP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43880
4 280 277 2.5E-189 –
PANTHER
PTHR43880:SF27
4 280 277 2.5E-189 –
SUPERFAMILY
SSF50129
4 186 183 5.33E-70
IPR011032
Gene3D
G3DSA:3.90.180.10
20 182 163 5.0E-106 –
Pfam
PF08240
36 163 128 3.7E-23
IPR013154
ProSitePatterns
PS00059
69 83 15 -
IPR002328
SUPERFAMILY
SSF51735
169 278 110 4.59E-33
IPR036291
Gene3D
G3DSA:3.40.50.720
183 279 97 5.0E-106 –
Pfam
PF00107
206 276 71 9.3E-14
IPR013149

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0274400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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