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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0334100 |
| Transcript ID | LotjaGi1g1v0334100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carboxypeptidase; TAIR: AT1G28110.1 serine carboxypeptidase-like 45; Swiss-Prot: sp|Q93Y09|SCP45_ARATH Serine carboxypeptidase-like 45; TrEMBL-Plants: tr|A0A151R6D2|A0A151R6D2_CAJCA Carboxypeptidase; Found in the gene: LotjaGi1g1v0334100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:79266021..79270112) extracted from Lotus japonicus Gifu genome v1.2.
CGAAACTCTTCATATATATTAAGATGAAAGACTGTTTATGTTATAACTCAATTGATATCGAAACACAGACTAAGGAGGTA TGAGGAAATGTTAAAAATTCACATTCTTCTAAGGTGTGAAAACTGTAAAGTAACCTCTTAAAGCCATTATCCATGGATGA GACTCTGTTGATGCAGTCAATAGGACAAAAGTTTTTTACATATTGTTTATTCCTAAGTGCAAAAAGGGTACAAGGTATTT ATTGTCAATTAACACATCCATAGAGAGAAAATAAAAGACAAAATGTAAAGAAGATCTAAACAGTAAATATTAGAATTTTT CAGGAGGAGTGGTATTATTCAGAATCCTTCAAGGCAGAAAAGACCATATTCCAATTCCCTTTCTTTGCAGCAAAATTACT TGCTGACTCAGCTTCAAGCATTCCAACTCTTCCATAATTTTCTTTTTGCAACTGTGTAGACTGTAGAGACTAGAGACAGA CCATGGTCATTGCCTCTGTCACATCTCTTTCACCACCAATTTCAGGCCTGCAATTGAAAAGTTAAAATTGTAATGATAAT TAGAATGGAATAGAATGCAAAAAATTCCAACCACCTTAGTGTGGCCCACCCTTAACCCCAACACTGTACACACACTAGCA TAATACTTTATATTTACCACCTTTCACTCTTTCTCTCAGCTAGTGCCTTGCAATTGCCTCAATTCTCTTCTCTTCATTTG TGTGAAACCATGAACTTGCCAACATGGAAGTTCAATACCATGGCATTGGCTGTGTTTTTGCTTCATCTGAGTTTCTCCTT GAAGGTGTTCTGTTTCTCTTCTGATGCAGATAGAATTGTTGAGCTTCCTGGGCAACCCCACATAGGATTCCAACAGTTCT CAGGATATGTCACTGTGGATGACATGAAACACAAGTCTCTTTTTTACTATTTTGCTGAATCAGAAACTGATCCAGCTTCA AAACCTCTTGTTCTCTGGCTCAATGGAGGTCTGCAATCTCTCACTTGCTTCAAAATTTGAAATTTGAAAACTTTCACTAC TTTGGATTGAATAAGAATAGCAATATGCATCCCTTGTTTTAACAATTAAATTTTATTCAGGACCTGGTTGTTCTTCTCTT GGAGTTGGTGCATTCTCTGAAAATGGACCCTTTAGACCAAATGGGGAGTTTTTGATTCAAAATGAGCATAGTTGGAATAT AGGTACTCTTTTGCCTTTTATTCTATCTGCCAAAATGCCCTGTATTTGTTCTTCTAGCATGTTCAAATCAGCATATTTTT CCAATTCTGGTATCCAGAAGTTACTTACAGAAGCTTATCTACATAATTGATCCTGACTAAAAATCAATTGTAGAAGAACT TACAAATATGATATTGTACTCATTGAGTTACTTTTGTGTTGCAGAGGCAAACATGCTGTATTTGGAGACACCAGTTGGAG TGGGGTTCTCATATGCTAGAGGTAGTTCCTCCTATATGACAGTGAATGATGAGGTAACAGGTATATATCCTTCACTAATG CCAATTACTTTTTTAGACTCTTCTTTTTAATCTTTTGGGAAAAAAATGTTTCTCTTTAGAAAGCTCCTTTTAATCCTACT TCTATGGGAAAAGGCACATTCCGCATGTTTTATACTGCTTAGGCTTTTTTAAAAAGTTGAGACAAAAATAGTGATTAGTG GTAAAATACTAAAATGTCATTCTAGGAGCTTTTGTATGGCACTTTACATGATTATTCTTCATCTCTTGTTCTCTACGCAA GCTTTAGAATGGTGTACTTTTACATTTTCAGTATGATTGTGTTGTCCTTGAATACTCAAATTGTCATTATTCCCTCAGAC ATTTGTCATCTGAAGCAGTGCTTTTTGAATTCTTAAGCCAGGGACAATGTTGTATTCCTGGAACGCTGGTTCAACAAGTT CCCACAATACAGGAATAGAGATTTGTTTCTAACTGGGGAAAGTTATGCAGGTAAATGTGTCACCTTTGTTTTATTGCATA TTTTAGGTATACAGTGTAAATCTAAGGTGAACCAAAATCATGGTGGACAAAAGCAACTTCCTTAGCTTTTGTGGCTGCCT ACCGTGATTTTAGCTTCATTGTGGTTTTCCAATCCAAACATGCACTTATCTATCAATATTCCATTTCATAAACAAACTAC AACAATTATTACTATTATTTGTGTTTACATATTTTTCTTTGTATGTGTGTGTATATCAGGTCATTATGTTCCTCAACTTG CAAATCTCATGATTGAAATGAACAAAAAGAACAAGATATTCAATCTGAAAGGCATAGCTGTAAGTAACATTAACTGTTAC CTATCTATCAGTGATGCTTTCTTTCTCACATATTAATGAATGGCCTCTTGTGTTGAAATGCAGTTGGGTAATCCAGTTCT AGAATATGCCACTGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGACTAATATCAGATTCAACATATAACATGT TCACTAGAGTGTGTAATTATTCTCGGTATGTTAGTGAGTACTATAGAGACTCAGTTTCACCTCTTTGCTCAAAGGTTATG GGACAGGTGAGCAAAGAAACCAGTAAATTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCCTCAGTGTTATC ACAATCGAAGGTTATTTCTCCTCAAACACATGTGAGTCTTCCCTTGTTGGCTTGCTTTTTCCATCACTTTATCTACTATT TTAGTTCTACTACTCACTGGTTTTCAAGTTTGCCTTGCTCATTAGCATCATTGTCTTGTGTTCTGACAGCAAGCAAATGA GAGGATAGATGTGTGCGTAGATGACAAGGTTACAAACTACTTAAACCGTAGAGATGTACAAGAGGCACTTCATGCAAAGC TTGTTGGAGTTCGCAAGTGGGATGTTTGCAGCAAGTAAGTCCTTCTCAGTTCTCATTAAGCATAAAACTTAGTGCGTATT TGAATACCAATTATAAGTAATCTGAACAAACTTTCATCTTAATCCATAAGAAGAGTTGGTGCAAACGGATATCCAAACAT ATATTTTCTACCAAATTGGTTGTTAGCCTAAGGTTTTGCTTAATTGATCTTTGAAAATAAGAAGATCAATCATCGGAGTC AGCTTTGCTTGTCCACCATGATTTTAACTGATCTTTGTTGTGTTGGTAACAGCGTCTTGGACTATGATATGCTCAACCTG GAAGTGCCTACACTCCCAATTGTTGGATTACTGATAAAATCTGGAGTTCGGGTCTTAATTTACAGGTAAATAAACAAAAC CAAAACCCTTTTTTCTTCTTGTGATTTATGTGGTTACTTGAATTTGAGGGCTCATACATCAGTGTTTTAGTGCTAATTAA CATAACAATGTGTATTGCTCTCTCTGCAGTGGAGATCAAGATTCAGTAATTCCATTGACCGGAAGCCGCACCTTAGTTCA AAAGTTGGCAACAAAATTAGGACTGAATACAACAGTCCCTTACAGAGTATGGTTTGAAGGCCAGCAGGTATGTATACAAA TCAAACATCTTGCTAGTTTGAATTATTGAGAAAAACATTGTTAAAATCTTGCTACATTTTAACATAATCAAATTGCATAT ACATCATAAACTAATCTCAGTTAATGAAACTAGGTTGGTGGGTGGACTCAAGTTTATGGCAGCATCCTTTCATTTGCCAC TGTTAGAGGTGCCTCTCATGAAGCCCCATTCTCTCAGCCTGAAAGATCATTTGTGCTGTTCAAGTCATTCTTGGAAGGAA GGCCTTTACCTGAAGTTTTCTGATTCACTCTCTTTTTGAATTTTCTCATTTAATTGAGGTTGTAATTAAGCATTATCCTT TAGTACTATGTCAAGTAAAGGAATGTGTATTAACTGTGCAGAATGTCAAAAGAAAAGTTGGAAAAGTTCTTTTTTTTTTC CTTTCCCTTTTGGGTTTTAAACCTTTGTAAGTGAGTTTTTGGGTGCTTTTGCTTGTTTTTGGGCTGTAAAATGTAATATA GATTATGAGTTATTTTATTCATTAACACTTTTCTACAAGACTTTCTACAACACTAGTTTACTCTCTGTCTTTCTTTATTA TATAAATAATTT
CDS sequence (LotjaGi1g1v0334100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACTTGCCAACATGGAAGTTCAATACCATGGCATTGGCTGTGTTTTTGCTTCATCTGAGTTTCTCCTTGAAGGTGTT CTGTTTCTCTTCTGATGCAGATAGAATTGTTGAGCTTCCTGGGCAACCCCACATAGGATTCCAACAGTTCTCAGGATATG TCACTGTGGATGACATGAAACACAAGTCTCTTTTTTACTATTTTGCTGAATCAGAAACTGATCCAGCTTCAAAACCTCTT GTTCTCTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTTGGAGTTGGTGCATTCTCTGAAAATGGACCCTTTAGACCAAA TGGGGAGTTTTTGATTCAAAATGAGCATAGTTGGAATATAGAGGCAAACATGCTGTATTTGGAGACACCAGTTGGAGTGG GGTTCTCATATGCTAGAGGTAGTTCCTCCTATATGACAGTGAATGATGAGGTAACAGCCAGGGACAATGTTGTATTCCTG GAACGCTGGTTCAACAAGTTCCCACAATACAGGAATAGAGATTTGTTTCTAACTGGGGAAAGTTATGCAGGTCATTATGT TCCTCAACTTGCAAATCTCATGATTGAAATGAACAAAAAGAACAAGATATTCAATCTGAAAGGCATAGCTTTGGGTAATC CAGTTCTAGAATATGCCACTGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGACTAATATCAGATTCAACATAT AACATGTTCACTAGAGTGTGTAATTATTCTCGGTATGTTAGTGAGTACTATAGAGACTCAGTTTCACCTCTTTGCTCAAA GGTTATGGGACAGGTGAGCAAAGAAACCAGTAAATTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCCTCAG TGTTATCACAATCGAAGGTTATTTCTCCTCAAACACATCAAGCAAATGAGAGGATAGATGTGTGCGTAGATGACAAGGTT ACAAACTACTTAAACCGTAGAGATGTACAAGAGGCACTTCATGCAAAGCTTGTTGGAGTTCGCAAGTGGGATGTTTGCAG CAACGTCTTGGACTATGATATGCTCAACCTGGAAGTGCCTACACTCCCAATTGTTGGATTACTGATAAAATCTGGAGTTC GGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCATTGACCGGAAGCCGCACCTTAGTTCAAAAGTTGGCAACA AAATTAGGACTGAATACAACAGTCCCTTACAGAGTATGGTTTGAAGGCCAGCAGGTTGGTGGGTGGACTCAAGTTTATGG CAGCATCCTTTCATTTGCCACTGTTAGAGGTGCCTCTCATGAAGCCCCATTCTCTCAGCCTGAAAGATCATTTGTGCTGT TCAAGTCATTCTTGGAAGGAAGGCCTTTACCTGAAGTTTTCTGA
Protein sequence (LotjaGi1g1v0334100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNLPTWKFNTMALAVFLLHLSFSLKVFCFSSDADRIVELPGQPHIGFQQFSGYVTVDDMKHKSLFYYFAESETDPASKPL VLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIQNEHSWNIEANMLYLETPVGVGFSYARGSSSYMTVNDEVTARDNVVFL ERWFNKFPQYRNRDLFLTGESYAGHYVPQLANLMIEMNKKNKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTY NMFTRVCNYSRYVSEYYRDSVSPLCSKVMGQVSKETSKFVDKYDVTLDVCISSVLSQSKVISPQTHQANERIDVCVDDKV TNYLNRRDVQEALHAKLVGVRKWDVCSNVLDYDMLNLEVPTLPIVGLLIKSGVRVLIYSGDQDSVIPLTGSRTLVQKLAT KLGLNTTVPYRVWFEGQQVGGWTQVYGSILSFATVRGASHEAPFSQPERSFVLFKSFLEGRPLPEVF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| SignalP_EUK | 1 | 28 | 28 | - | – | |
| PANTHER | 8 | 465 | 458 | 1.7E-248 | – | |
| PANTHER | 8 | 465 | 458 | 1.7E-248 | ||
| Phobius | 12 | 24 | 13 | - | – | |
| Phobius | 25 | 28 | 4 | - | – | |
| Phobius | 29 | 467 | 439 | - | – | |
| Gene3D | 30 | 292 | 263 | 2.4E-94 | ||
| SUPERFAMILY | 38 | 464 | 427 | 2.05E-118 | ||
| Pfam | 44 | 460 | 417 | 1.8E-123 | ||
| PRINTS | 114 | 126 | 13 | 1.1E-25 | ||
| PRINTS | 127 | 137 | 11 | 1.1E-25 | ||
| PRINTS | 163 | 188 | 26 | 1.1E-25 | ||
| ProSitePatterns | 177 | 184 | 8 | - | ||
| Gene3D | 313 | 463 | 151 | 8.8E-33 | – | |
| PRINTS | 430 | 443 | 14 | 1.1E-25 | ||
| ProSitePatterns | 430 | 447 | 18 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type carboxypeptidase activity | Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi1g1v0334100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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