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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0367300 |
| Transcript ID | LotjaGi1g1v0367300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cell wall invertase; TAIR: AT1G55120.1 beta-fructofuranosidase 5; Swiss-Prot: sp|Q70XE6|6FEH_BETVU Fructan 6-exohydrolase; TrEMBL-Plants: tr|A0A0R0GI69|A0A0R0GI69_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0367300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:84525010..84530320) extracted from Lotus japonicus Gifu genome v1.2.
TGTGATTGATGTTAGTCTCATAAAGGCTAACTTGGTAAGAGCTGAGCCTATGGGAAGTGAATGATAATGAAGGAAGGATT TGTCATTTGTTCGTAGCGGTGACAATACTGTCGCTAATATTCTTGCTAAGAGGGGGATGTTGTTTCCTTCCTTTGTATGG GTTGAGGATGTTCTCCCAGGTCTTGTTCCTTTTATTCATCTTAATGCAATGATCCATGTGCCTCATGTTTCTTCTTCTTA ATTAATGAAGTTTACTTCCAAAAAAAAAAAGAGCGTATTTGATTTTTGGATTGAGCTCATAATTATTTTTAGAAGATTAT ACAATGTAACTTTTGATCATAAAATGTAGATTTCAATGTGTTTTCACGCAGTGAACCTCAGAGAAACCAAGTTTAAGCCT AGGAAAGAATTTGAGACCTAGTCTTTTTTCAGTGTTCAAAATGAATATAACATCTCCTAAGACATTTTTCCCATATATAT ATCAATAATCCTAGTTTATTGCGTAATTGTCCATACCCATGTAGCTACATATGTCGGGTATGGAGGTAATATACTTTGAC CTATTCAAGACTACAAAATATCTAAACCACAATCGCTCTTTAGCAACCCACGTCCACTAGGTCGCTTATGAAGAAGAGGT TGCTCATGAAGAAGAAGTTGCCCGTAGTGATGAGATCGTCTGTGATGATGAGATTAGGTCACTCGTAATAGGGGAGGTTG GCTATGATGAAGTCACGGGTCCAAATCCGTTTGACCCAAATTTTGAACTCCGGACTTAAGTCTCTCCCACAAGCCCCCCA TACATCAAGCCTTGAGTATTAAGACAAAGTATGTATTTTTAAACTGCAACGACTTACATTCTCCGTACATCGCCCAACCA ATCCACAATGTTTATTGAATCCCTCGCTATCATCTCTATTTTGTTATTGTTATATTGGAAGGGTTAGTGGACGGTGTACT CAATTTTTTTATCAATCACGTCTAAGTATTAAACTGGATTAGTCCAATAATTATGTATATTTAACTATTCCGGCATTTGG TATTTCATAGGAATCTTGTCCTACAGTTTATTTTTCTTAAAATGAAGTTGAAATAAAGCATAAAGGAACAACATAGAACT GTTTCTTTTCTTTAGGGAATTCTAGTTCTCTAATGGTTGCTTAGAAAACCATTCAAGAGAAATTTTGAAAATAAAAAACC AAAAGTATTAAATCATGAGTTACATCAAAAGCCTAACTCTTTAGACCATCATTATCCAAAAAACTCATTAGAGTTTCTAA TTTAAATTTTGGTAATGTCACGTCATTTAAACCACCTTAATCAACTCTACTTACTTTGTACTTCAACCCAGCAACTCTAA AAAATTTCTTAAATGAACCCCACAATATACCTTACATTTTTATATTTTTATTATTTATATTTCATTTCAATTAATTCTTG TTTTTTATTTATTTTTTAATCATTAAATTTGGAAGAGAAACTCTGAGCGAGAAACTTTGGAGCAAAGTTACTTGTCACGG GAGAAACTTCATTTTCTGCAACAGTTAAGAAACTTTATTTCAGATGACATGTCAGTTTCTTTGTTGCAGATGCTCTTGTT AACGTTCCCCTACCAATCTGGGCTCATCTGGCATCATGGAAATATCTGCAACTTTACCATTACTGGTGTTATTAACTTTT CTGCAAAACACTGGATTGGTGATCAAAGCTTTGCCATTCAGCATGATCAGTTCTACCAAGTACAGGTTACCTGATCAACA GCCTTATCGAACTTCCTATCACTTTCAGCCCCCACAGAATTGGATGAACGGTATTACCCTCAACCAATCATTGTCAAATG TCAATATAATGTTCTAATTCATGGATTATATCTGACTGATTAGTGATTATCTTCTCTATCATTTCACATGATTTGTTGAA GAAAATTGGAACATGGATGCCTTTATTTTGCAGATCCCAATGGTAAGCCTCCTTCAAACTTTCTGGTTATTACTTGGTTG TTTGGTTCTCATCCCACCATCTTATAGCATGTTTGCATCAGTTTCTCTTTCGTCAGAATTAATTTTGTGAAGCTTCTAAA GCTTATTCCCCGAATTGATTCTAGCTTCAAAATCAATTGTACAAGAGTTTCCAAGCATGCACTTAGTACATGTCTAGGCA TAAGAGAGAATTAAAATTATGTTCCATTTTTTCAATGTAAAATTCACTGAAGTAGAATATTTAGTGTCTGTTTGAAATTT TTAAATCAATTCTGGAGAGAAACTTATGTGAGTAGCTTTTGGCTGATAGAATTGATTCTAAGAGGAAAAATGCAAACATG ATGATAGAGCTAGCTACTTCAACCACAGTTTCAGTGGAAGAACTTCCACACAACAATTATAGCATGTTTAGATCAGTTTA TTTTTCCTCAAAATCAGTTCTAGCATACAAAAGCTACTCAAAGAAGCTTTTTTCTCATAGTTGACTAATGTTGAGCCAAG TCTTAATAAAATTAGATCCAAAATTATTATCTGATTACTAATGTTGATTTATCTATAACAGGGCCAATGTATTATAAAGG TGTTTACCACCTTTTTTACCAATACAACCCTTATGCAGCTACCTTTGGTGACATCATGGTATGGGCTCACTCAGTGTCCT ATGATCTCATCAACTGGATTCACCTGAACAATGCTATTGAGCCAAGTGAGCCATATGACATTAATAGCTGCTGGTCTGGC TCAGCCACAATCCTCCCAGATGAAAAGCCTGTGATCTTGTACACTGGAATTGCTGAGAACAAGTATCAAGTTCAGAATTT GGCTATGCCAAAGAATCTCTCAGACCCTTTCTTAAGGGAGTGGATCAAACACAGCCAAAATCCTGTAATAACTCCACCTA GTGGTGCTGAAGTGGACAATTTCAGAGACCCTTCAACTGCTTGGAAGGGAAGTGATGGGAAATGGAGAGTGGTCATAGGT GCTCAAAAGGGTGATGAAGGGAAAGCAATTGTGTACAAAAGTGAGGATTTTTTTAATTGGAAATTAGATGCTGATCCTTT TTATGCATCAGAGAATACTGGAGTGGTTGAATGTCCAGATTTCTTTCCAGTGTCAATTAATGGCACAAATGGGGTCGATA CATCTGTCGAAAATCCGAGTGTTAGGCATGTCATGAAGGTAGGATATCTAAGAAGACAGCATGATTACTATTTTCTTGGT AAATATCTCTCTGATAAGGAAATTTTTGTTGCTGATAATAACTTCACCGGAACTATTTTGGACTTAAGATATGACTACGG TAAATTTTATGCTTCCAAGTCATTTTTCGACTATCCCAAGAAGAGGAGGATATTGTGGGGTTGGGTAAATGAATCAGACA CTGAGCAAGATGATATTGAGAAAGGATGGGCTGGTATACAGGTACTCTAGTCTAGAACTCTAGCTAGTTCTCAATTTCTT CGTATCATTCATTACCTTTGAGTATAGAATTGATTCTGAAGGGAGAGAAGCTTCTATGAGTAGCTTCTGGGTTGCAGAAT TGATTCTGGTGAAAGAGAAGCTGATCAAAAACATACTATGAATGAATTTGTTCTGAATGGCTATATACTTATCCTAAAGT TAAATTATTAAGATGGGAGGATCAAATACTGATGAGTGGTTGGTGTTTTTTGATTATGCAGGCCATTCCAAGACAAGTTT GGCTTGATAATAAAAGTGGGAAGCAATTGATGCAGTGGCCAATTGAAGAAGTAGAAAAACTAAGGGGCAAGAAAATAAGT ATTCATGGAGAGAAACTCTTAAGTGGATCAATTATTGAAGTTTCAGGTATCACTGCTTCACAGGTACAAGTAGAACACTG AAATTGTGTTTACTTTTCCGTATTTTCTTGATAAATTTTCAGAACAAGAACAACATTGTTGATGATTATTTTTAACTTGT ATTTATTCAGGCTGACGTAGAGATAGTGTTTGAGGTACCTGAATTAGAAAATGTGGAGTCATTAGATGCCAAAAGGGTTG ATCCTCAATTACTGTGTAGTGAAGAGAGTGCATCAAAAAGTGGCAAACTAGGGCCGTTTGGTTTATCTGCATTAGCTTCG GAAGACCAAAGAGAGCAAACTGCAGTCTTCTTTCGAATATATAAATCTTCCAACAAATATTTAGGCCTAATGTGCAGTGA CCAGAGCAGGTTCCTTGTTTCTGACATCTTTCCTCCCTAGCATGTTGCTGTTACTTTTGTTTTTTCAGAATCAACTATGA AACTAGAAATTAAACGCTTATAGCACGTTTGCAATTGTTAGAATTGATTCTGCACTGGCAGAATCAATTTGAGCATTTGA ATGTTTTCTTTCACAATTGATTTTAGCTCCAAAATCTATTACGCGGTGAAGCTACAAATCATAGGTTCTATGGTTGACAT AATCAATTGTGAAATTTTACAACATTACCCCCATAGAAATCACTTTACTCATAAATGTATCCAAAGATAAATCGCTTAAC TTTTACCGTAATCGATTTTACCAAAATCAATTTTATCTACAATCAAATCACAATGCTGATCCAAATACGTACTTAAATTG AGATTGAATCTCACTCAGTAATTTGTGCTTGGAAATTGCTTACAATTCACAGGTCTTCACTGCGGAAGGACCTTGATAAA ACGACATATGGAAGTTTCTTTGAATTTGATCCCAATCTCAAAAGAATCTCACTAAGAAGCTTGGTATGCTAATTGTGTAT GATTAAAGTCTCTTCTTTGTTGTATGTGCAAAATGGTCTGATATAAATATTGTTATTGTGCAGATTGATCACTCTATTAT TGAGAGTTTTGGGGAGGGAGGGAGAGTTTGTATCACCAGTAGAGTCTATCCATTGTTAGCTATTGGCAAAGAAGCTCATC TTTATGTATTTAACAATGGAACTCAGAGTGTCCAAATCTCAAATCTAAATGCTTGGTGCATGAAGGAAGCAGAGGTTGGC TATCAGAAAAATGTACGCTATGTAGAATGTAGCTAAGCGGGATAAGGACAGCAAACTTTATTAAAAGTGATTGGAACCGA ATCAAATTTTTACTGTTCTTTTTTATTCGATCCATTGGTGTGGCATCTTGGCAGGGAATTTATTGTAAGAAAACTGAATT GGTGATCTTCTCATTAATCTGAATAGGTATATATACAAAACTAAGTCAAAACATTTCTAATATGTCTAGCTTAATTACAT ACATGATTGTAGCCTAATTACAAAGACTAAATAAGAATAATACATATTCCTATTCTATCATTTATGTTGACAGTTTGATA TGCATTGCAAAATAAAGATTTCACAAAGAAC
CDS sequence (LotjaGi1g1v0367300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAATATCTGCAACTTTACCATTACTGGTGTTATTAACTTTTCTGCAAAACACTGGATTGGTGATCAAAGCTTTGCC ATTCAGCATGATCAGTTCTACCAAGTACAGGTTACCTGATCAACAGCCTTATCGAACTTCCTATCACTTTCAGCCCCCAC AGAATTGGATGAACGATCCCAATGGGCCAATGTATTATAAAGGTGTTTACCACCTTTTTTACCAATACAACCCTTATGCA GCTACCTTTGGTGACATCATGGTATGGGCTCACTCAGTGTCCTATGATCTCATCAACTGGATTCACCTGAACAATGCTAT TGAGCCAAGTGAGCCATATGACATTAATAGCTGCTGGTCTGGCTCAGCCACAATCCTCCCAGATGAAAAGCCTGTGATCT TGTACACTGGAATTGCTGAGAACAAGTATCAAGTTCAGAATTTGGCTATGCCAAAGAATCTCTCAGACCCTTTCTTAAGG GAGTGGATCAAACACAGCCAAAATCCTGTAATAACTCCACCTAGTGGTGCTGAAGTGGACAATTTCAGAGACCCTTCAAC TGCTTGGAAGGGAAGTGATGGGAAATGGAGAGTGGTCATAGGTGCTCAAAAGGGTGATGAAGGGAAAGCAATTGTGTACA AAAGTGAGGATTTTTTTAATTGGAAATTAGATGCTGATCCTTTTTATGCATCAGAGAATACTGGAGTGGTTGAATGTCCA GATTTCTTTCCAGTGTCAATTAATGGCACAAATGGGGTCGATACATCTGTCGAAAATCCGAGTGTTAGGCATGTCATGAA GGTAGGATATCTAAGAAGACAGCATGATTACTATTTTCTTGGTAAATATCTCTCTGATAAGGAAATTTTTGTTGCTGATA ATAACTTCACCGGAACTATTTTGGACTTAAGATATGACTACGGTAAATTTTATGCTTCCAAGTCATTTTTCGACTATCCC AAGAAGAGGAGGATATTGTGGGGTTGGGTAAATGAATCAGACACTGAGCAAGATGATATTGAGAAAGGATGGGCTGGTAT ACAGGCCATTCCAAGACAAGTTTGGCTTGATAATAAAAGTGGGAAGCAATTGATGCAGTGGCCAATTGAAGAAGTAGAAA AACTAAGGGGCAAGAAAATAAGTATTCATGGAGAGAAACTCTTAAGTGGATCAATTATTGAAGTTTCAGGTATCACTGCT TCACAGGCTGACGTAGAGATAGTGTTTGAGGTACCTGAATTAGAAAATGTGGAGTCATTAGATGCCAAAAGGGTTGATCC TCAATTACTGTGTAGTGAAGAGAGTGCATCAAAAAGTGGCAAACTAGGGCCGTTTGGTTTATCTGCATTAGCTTCGGAAG ACCAAAGAGAGCAAACTGCAGTCTTCTTTCGAATATATAAATCTTCCAACAAATATTTAGGCCTAATGTGCAGTGACCAG AGCAGGTCTTCACTGCGGAAGGACCTTGATAAAACGACATATGGAAGTTTCTTTGAATTTGATCCCAATCTCAAAAGAAT CTCACTAAGAAGCTTGATTGATCACTCTATTATTGAGAGTTTTGGGGAGGGAGGGAGAGTTTGTATCACCAGTAGAGTCT ATCCATTGTTAGCTATTGGCAAAGAAGCTCATCTTTATGTATTTAACAATGGAACTCAGAGTGTCCAAATCTCAAATCTA AATGCTTGGTGCATGAAGGAAGCAGAGGTTGGCTATCAGAAAAATGTACGCTATGTAGAATGTAGCTAA
Protein sequence (LotjaGi1g1v0367300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEISATLPLLVLLTFLQNTGLVIKALPFSMISSTKYRLPDQQPYRTSYHFQPPQNWMNDPNGPMYYKGVYHLFYQYNPYA ATFGDIMVWAHSVSYDLINWIHLNNAIEPSEPYDINSCWSGSATILPDEKPVILYTGIAENKYQVQNLAMPKNLSDPFLR EWIKHSQNPVITPPSGAEVDNFRDPSTAWKGSDGKWRVVIGAQKGDEGKAIVYKSEDFFNWKLDADPFYASENTGVVECP DFFPVSINGTNGVDTSVENPSVRHVMKVGYLRRQHDYYFLGKYLSDKEIFVADNNFTGTILDLRYDYGKFYASKSFFDYP KKRRILWGWVNESDTEQDDIEKGWAGIQAIPRQVWLDNKSGKQLMQWPIEEVEKLRGKKISIHGEKLLSGSIIEVSGITA SQADVEIVFEVPELENVESLDAKRVDPQLLCSEESASKSGKLGPFGLSALASEDQREQTAVFFRIYKSSNKYLGLMCSDQ SRSSLRKDLDKTTYGSFFEFDPNLKRISLRSLIDHSIIESFGEGGRVCITSRVYPLLAIGKEAHLYVFNNGTQSVQISNL NAWCMKEAEVGYQKNVRYVECS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 5 | 16 | 12 | - | – | |
| Phobius | 17 | 24 | 8 | - | – | |
| Phobius | 25 | 582 | 558 | - | – | |
| SUPERFAMILY | 41 | 369 | 329 | 8.95E-104 | ||
| PANTHER | 41 | 568 | 528 | 2.8E-283 | – | |
| PANTHER | 41 | 568 | 528 | 2.8E-283 | – | |
| SMART | 49 | 525 | 477 | 8.4E-232 | ||
| ProSitePatterns | 49 | 62 | 14 | - | ||
| Pfam | 49 | 368 | 320 | 5.9E-105 | ||
| Gene3D | 53 | 378 | 326 | 2.5E-232 | ||
| CDD | 55 | 356 | 302 | 1.65982E-163 | – | |
| SUPERFAMILY | 368 | 567 | 200 | 7.6E-32 | ||
| Pfam | 371 | 563 | 193 | 9.0E-29 | ||
| Gene3D | 379 | 566 | 188 | 2.5E-232 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi1g1v0367300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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