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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013189
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We have found 34 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.512s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0181119.1
n.a. PREDICTED: beta-fructofuranosidase, soluble isoenzyme I-like [Glycine max] gi|356544267|ref|XP_003540575.1| chr0 88298270 88298783 -
2 domain predictions
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Lj0g3v0214719.1
n.a. PREDICTED: beta-fructofuranosidase, insoluble isoenzyme 1-like [Glycine max] gi|356570859|ref|XP_003553601.1| chr0 108827336 108838623 +
3 domain predictions
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Lj0g3v0258299.1
n.a. PREDICTED: beta-fructofuranosidase, soluble isoenzyme I-like [Cicer arietinum] gi|502127341|ref|XP_004499664.1| chr0 134103928 134108194 +
3 domain predictions
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Lj0g3v0281009.1
n.a. Acid beta-fructofuranosidase [Medicago truncatula] gi|357476945|ref|XP_003608758.1| chr0 145693012 145698354 -
3 domain predictions
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Lj0g3v0281009.2
n.a. Acid beta-fructofuranosidase [Medicago truncatula] gi|357476945|ref|XP_003608758.1| chr0 145694563 145698354 -
3 domain predictions
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Lj0g3v0314989.1
n.a. Beta-fructofuranosidase, insoluble isoenzyme [Medicago truncatula] gi|357511139|ref|XP_003625858.1| chr0 164475685 164476817 +
2 domain predictions
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Lj1g3v1786080.1
n.a. PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1-like [Glycine max] gi|356552366|ref|XP_003544539.1| chr1 20984176 20989164 +
3 domain predictions
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Lj3g3v0323220.1
n.a. PREDICTED: beta-fructofuranosidase, cell wall isozyme-like isoform 2 [Glycine max] gi|356556771|ref|XP_003546696.1| chr3 2399510 2403316 +
3 domain predictions
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Lj3g3v2691860.1
n.a. PREDICTED: beta-fructofuranosidase, cell wall isozyme-like isoform 1 [Glycine max] gi|356556769|ref|XP_003546695.1| chr3 32689869 32696244 -
3 domain predictions
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Lj5g3v0406100.3
n.a. PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1-like [Glycine max] gi|356552366|ref|XP_003544539.1| chr5 3979635 3983326 +
2 domain predictions
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LotjaGi1g1v0367300.1
n.a. Cell wall invertase; TAIR: AT1G55120.1 beta-fructofuranosidase 5; Swiss-Prot: sp|Q70XE6|6FEH_BETVU Fructan 6-exohydrolase; TrEMBL-Plants: tr|A0A0R0GI69|A0A0R0GI69_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0367300 LjG1.1_chr1 84525010 84530320 +
2 domain predictions
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LotjaGi1g1v0367300.2
n.a. Cell wall invertase; TAIR: AT1G55120.1 beta-fructofuranosidase 5; Swiss-Prot: sp|Q70XE6|6FEH_BETVU Fructan 6-exohydrolase; TrEMBL-Plants: tr|A0A0R0GI69|A0A0R0GI69_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0367300 LjG1.1_chr1 84525166 84530320 +
2 domain predictions
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LotjaGi1g1v0674200.1
n.a. Cell wall invertase; TAIR: AT3G52600.3 cell wall invertase 2; Swiss-Prot: sp|P26792|INV1_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 1; TrEMBL-Plants: tr|I1NAQ0|I1NAQ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0674200 LjG1.1_chr1 124029419 124041024 -
2 domain predictions
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LotjaGi1g1v0674400.1
n.a. Cell wall invertase; TAIR: AT3G52600.1 cell wall invertase 2; Swiss-Prot: sp|P26792|INV1_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 1; TrEMBL-Plants: tr|G7KQY4|G7KQY4_MEDTR Beta-fructofuranosidase, insoluble protein; Found in the gene: LotjaGi1g1v0674400 LjG1.1_chr1 124065680 124071262 +
2 domain predictions
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LotjaGi2g1v0425800.1
n.a. Acid beta-fructofuranosidase; TAIR: AT1G12240.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|P29001|INVA_VIGRR Acid beta-fructofuranosidase; TrEMBL-Plants: tr|A0A151TJF4|A0A151TJF4_CAJCA Acid beta-fructofuranosidase; Found in the gene: LotjaGi2g1v0425800 LjG1.1_chr2 92351052 92359495 +
2 domain predictions
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LotjaGi2g1v0425800.2
n.a. Acid beta-fructofuranosidase; TAIR: AT1G12240.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43857|INVA_VICFA Acid beta-fructofuranosidase; TrEMBL-Plants: tr|A0A151TJF4|A0A151TJF4_CAJCA Acid beta-fructofuranosidase; Found in the gene: LotjaGi2g1v0425800 LjG1.1_chr2 92351106 92359187 +
2 domain predictions
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LotjaGi2g1v0425800.3
n.a. Acid beta-fructofuranosidase; TAIR: AT1G12240.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|P29001|INVA_VIGRR Acid beta-fructofuranosidase; TrEMBL-Plants: tr|A0A151TJF4|A0A151TJF4_CAJCA Acid beta-fructofuranosidase; Found in the gene: LotjaGi2g1v0425800 LjG1.1_chr2 92352160 92354953 +
2 domain predictions
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LotjaGi2g1v0425800.4
n.a. Acid beta-fructofuranosidase; TAIR: AT1G12240.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43857|INVA_VICFA Acid beta-fructofuranosidase; TrEMBL-Plants: tr|A0A151TJF4|A0A151TJF4_CAJCA Acid beta-fructofuranosidase; Found in the gene: LotjaGi2g1v0425800 LjG1.1_chr2 92352429 92354814 +
2 domain predictions
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LotjaGi3g1v0026600.1
n.a. Cell-wall invertase; TAIR: AT3G13790.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43089|INV1_PEA Beta-fructofuranosidase, cell wall isozyme; TrEMBL-Plants: tr|I1MCZ9|I1MCZ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0026600 LjG1.1_chr3 2914225 2919273 +
2 domain predictions
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LotjaGi3g1v0069800.1
n.a. Cell wall invertase; TAIR: AT3G13790.3 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q56UD1|INV5_ORYSJ Beta-fructofuranosidase, insoluble isoenzyme 5; TrEMBL-Plants: tr|A0A078GGB7|A0A078GGB7_BRANA BnaC05g39510D protein; Found in the gene: LotjaGi3g1v0069800 LjG1.1_chr3 7599132 7603110 +
2 domain predictions
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LotjaGi3g1v0327700.1
n.a. Acid invertase 1; TAIR: AT1G62660.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|P80065|INVB_DAUCA Beta-fructofuranosidase, soluble isoenzyme I; TrEMBL-Plants: tr|K7KYK6|K7KYK6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0327700 LjG1.1_chr3 69531316 69536631 +
2 domain predictions
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LotjaGi3g1v0327700.2
n.a. Acid invertase 1; TAIR: AT1G62660.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|P80065|INVB_DAUCA Beta-fructofuranosidase, soluble isoenzyme I; TrEMBL-Plants: tr|G7IYH0|G7IYH0_MEDTR Soluble acid invertase FRUCT2; Found in the gene: LotjaGi3g1v0327700 LjG1.1_chr3 69531316 69536631 +
2 domain predictions
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LotjaGi3g1v0424000.1
n.a. Cell-wall invertase; TAIR: AT3G13790.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43089|INV1_PEA Beta-fructofuranosidase, cell wall isozyme; TrEMBL-Plants: tr|A0A072TLX8|A0A072TLX8_MEDTR Cell-wall invertase; Found in the gene: LotjaGi3g1v0424000 LjG1.1_chr3 83314533 83323312 -
2 domain predictions
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LotjaGi3g1v0424000.2
n.a. Cell-wall invertase; TAIR: AT3G13790.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43089|INV1_PEA Beta-fructofuranosidase, cell wall isozyme; TrEMBL-Plants: tr|A0A072TLX8|A0A072TLX8_MEDTR Cell-wall invertase; Found in the gene: LotjaGi3g1v0424000 LjG1.1_chr3 83314533 83323312 -
2 domain predictions
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LotjaGi3g1v0553400.1
n.a. Acid invertase 1; TAIR: AT1G62660.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|P80065|INVB_DAUCA Beta-fructofuranosidase, soluble isoenzyme I; TrEMBL-Plants: tr|K7LFL4|K7LFL4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0553400 LjG1.1_chr3 97086354 97093870 +
2 domain predictions
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LotjaGi3g1v0553400.2
n.a. Acid invertase 1; TAIR: AT1G62660.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|P80065|INVB_DAUCA Beta-fructofuranosidase, soluble isoenzyme I; TrEMBL-Plants: tr|A0A0R0ICA1|A0A0R0ICA1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0553400 LjG1.1_chr3 97089155 97093667 +
2 domain predictions
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LotjaGi4g1v0208900.1
n.a. Acid invertase 1; TAIR: AT1G12240.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|P29001|INVA_VIGRR Acid beta-fructofuranosidase; TrEMBL-Plants: tr|G7JK43|G7JK43_MEDTR Soluble acid invertase FRUCT2; Found in the gene: LotjaGi4g1v0208900 LjG1.1_chr4 48543233 48549331 +
2 domain predictions
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LotjaGi4g1v0208900.2
n.a. Acid invertase 1; TAIR: AT1G12240.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43857|INVA_VICFA Acid beta-fructofuranosidase; TrEMBL-Plants: tr|G7JK43|G7JK43_MEDTR Soluble acid invertase FRUCT2; Found in the gene: LotjaGi4g1v0208900 LjG1.1_chr4 48543462 48547194 +
2 domain predictions
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LotjaGi5g1v0042900_LC.1
n.a. Beta-fructofuranosidase, insoluble protein; TAIR: AT3G13790.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43866|INV1_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV1; TrEMBL-Plants: tr|I3S5X8|I3S5X8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0042900_LC LjG1.1_chr5 7221129 7233031 -
2 domain predictions
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LotjaGi5g1v0042900_LC.2
n.a. Beta-fructofuranosidase, insoluble protein; TAIR: AT3G13790.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43866|INV1_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV1; TrEMBL-Plants: tr|I3S5X8|I3S5X8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0042900_LC LjG1.1_chr5 7221129 7233031 -
2 domain predictions
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LotjaGi5g1v0042900_LC.3
n.a. Beta-fructofuranosidase, insoluble protein; TAIR: AT3G13790.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43866|INV1_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV1; TrEMBL-Plants: tr|I3S5X8|I3S5X8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0042900_LC LjG1.1_chr5 7221129 7233031 -
2 domain predictions
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LotjaGi5g1v0042900_LC.4
n.a. Cell wall invertase; TAIR: AT3G13790.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43866|INV1_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV1; TrEMBL-Plants: tr|A0A1J7HH19|A0A1J7HH19_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0042900_LC LjG1.1_chr5 7221972 7233024 -
2 domain predictions
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LotjaGi5g1v0042900_LC.5
n.a. Beta-fructofuranosidase, insoluble protein; TAIR: AT3G13790.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43866|INV1_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV1; TrEMBL-Plants: tr|I3S5X8|I3S5X8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0042900_LC LjG1.1_chr5 7229628 7233024 -
2 domain predictions
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LotjaGi5g1v0098900.1
n.a. Cell wall invertase; TAIR: AT2G36190.1 cell wall invertase 4; Swiss-Prot: sp|P26792|INV1_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 1; TrEMBL-Plants: tr|A0A151U3J2|A0A151U3J2_CAJCA Beta-fructofuranosidase, insoluble isoenzyme 1; Found in the gene: LotjaGi5g1v0098900 LjG1.1_chr5 17797097 17799966 +
2 domain predictions
 –