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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0375100 |
| Transcript ID | LotjaGi1g1v0375100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 70-kDa heat shock protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|A0A151TME6|A0A151TME6_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0375100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:85341329..85344012) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATTAGCTCGTAACAACTGCATGCACTGAAGTTATTTTGCAATGTGGGATCTTGGTCTTCTATTTTCTTTAATAAGT AATCAATTAAAAATAACTCTTGAAACAGCGCTTATTAGTTATTAGTCTTATCTCGCTTAATCAATGTTGTTGTTTGCTTT TTTCTTTTTAACGCGGAATGCTATTTACTCGGTCTACACTTTCAGTTAGTAAAACCCGATTGGATAGTCACCCAAACCGC AGGACCAACATCAATACCAAACCAGCTGAAAATGCTTCTATCACCAGCCATTGGTAGCAATTTCAGATTTAGCGTGAGGA GCTTGTCAATTTCTCCAACCACCTGAGCACGTTGAAGAAGGCAGAAGCTCCCTATATACACACACCACACCTCAAATCAG ATTCATTAATTGAAGTGAAGAACATGCCTGGGAATGAAGGCAGTAACATTGTGAGTGAATGGCAGAAGTCAAGATGCCTT GCGCTAACACCATGCATAGAGGGTCCTGCGATCGGAATTGACCTCGGAACTACGTACTCATGCGTTGGTATTTGGCTGCA TGATCATGTTGAAATCATAGCCAATGATCAGGGTAACAGGACTACCCCGTCCTATGTGGCATTCACCGATACTGAACGAT TGATCGGCAGTGCTGCCATGAACCAGGCCGCTATGAACCCAATGAACACCGTTTTCGGTAAGTCTCGAGTTCACTAATTC CACTGATTCTCTTAACTTTTTTCTGAAAATGTGTTTGATTGTTAGTAAAAATTGTTGTTATACTTAGATTTTATTATTGC AGGAGAACATTGTTTGTGCGTAGCAATTGATATGGTTTTGTGTATCTTTCGGTGTGGCGTGTGCAGATGCTAAGCGTTTG ATGGGTAGGAGGTTTATGGATGATTTGGTGCAGAATGACATTAAATCGTGGCCGTTCAAGGTGATGCCTGGCCCTGGTTA CAGGCCAATGATTGTAGTGAATTACAAGGGGGAGGTGAAGCGGTTTTCTCCGGAGGAGATATCTTCCATGGTTCTCACGA AGATGAGAGAGATTGCGGAGGCCTATCTTGGTACCACTGTAAAGAATGCGGTGATTAGTGTGCCCGCTTACTTCAATGAC TCTCAGCGTCAGGCTACCAAGGATGCCGGCGTCATTTCTGGCCTCAATGTGATGCGAATCATCAATGAGCCTACTGCGGC TGCCATTGCCTATGGACTCGAACTCGACAAGAAAGGCATTGCCACCAGCGCTAAGAGGAACGTTCTCATTTTCGACCTTG GTGGTGGGGCTTTTGATGTCTCGCTTGTTACCATGGCGGAAGGTAGCTTCGAGGTGAAAGCCACCGCGGGTGACACTCAC TTTGGGGGTGAGGAATTTGACAACAGAATTGTGAACCATTTTGTTGAGGAATTCAGGTGGAAGAACAATAAGGACATTAG CGGAGATGCCACCGCTGTTAGGAAGTTGAAGACCGCATGGGAGAAGGCGAAGAGGATACTATCATTCACTGATGAAACCA CCATTGAGATTGATTCTCTGTATGAAGGCATTGAGTTTTCCACAAACATCTCTCGTGCGCGGTTCGAAGAGCTGAACAAG GACTTGTTCAGGATGTGTATGGAGCGTGTAGTGATGTGTTTGAAAGATGCAAAGATGGAAAAGAGAAAGGTGGACGATGT TGTTCTTGTTGGCGGATCCACGAGGATGCCAAAGGTTCAGCAGTTATTGCAAGAGTTCTTCAATGGCAAGGAAGTTTGCA AGAGCATCATTAACCCTGAGGAGGCTGTTGCCTATGGTGCTTCTGTCCAGGCTGCAATTTTGAGTGGAAAAAAGGGACTG CAGGCTCTTAAATTGCTTGATGTAACTCCACTCTGCATTGGATTTGAGACTGGTGATGGGGATATGCAAGTGTTGATTCC CAGAAATACTAAAATCCCCATTAGGAAGGAGGAGGTTTTTACAACCTCCGCCGATAACCAACCCGGTGTGCTGATTCCGG TTTTTGAGGAGGGTGACCGGATAGTTAGAACTCATGGTCGTCACTACAACAACTTGCTTGGCAAGTTTGTGGTGTCCGGA CTCCCTTATTTACCAAAGGGTGCTCCAAAGCTCAATGTTTGCTTCGACATCAATGCTGATGGTATCTTGAGTGTCTCCGC AGAGGACAGAACCATAGGAATGAAGAACATGCTGACCAGAGAGAGGAACAAGATTAGAATCAGCAACGACAAGGTGAGGC TTTCGAAGGAGGCGATAGAGAAGATGGTGAAGGAAGGTGAGAAGTACAGAGAGAGAGTAGAGGCGAAGAATGCTCTAGAG AATTATGCGGATAACGTGAGGAAGATGATCAAGGATTATGATATGATTGGCTCAGAGTTTTCAGCTGATGATAAGAAGAG GATTGAAGATGCAATTGAGCAGGCTATGCAATGGCTTGATGGGAACAAACTTGCCAAGACTAATGAATTTAAGGAGAGGA AGAAGGAGGTGGAGAGTATCTGCAACCCCATCATCTTAGCTAAGATGAATCAAATGTTTGATTAAGCAGACAGAACATCG ATCACATCAGCGTTTGATTTTGCAAGACACATTTGGTTTGGGATTAAATACTAGCTACATCATGTCTATATATAGCATAC TTTTTCTCTGTTTTTTCAGTATACTGTACATCGTTGTTTCACCA
CDS sequence (LotjaGi1g1v0375100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTGGGAATGAAGGCAGTAACATTGTGAGTGAATGGCAGAAGTCAAGATGCCTTGCGCTAACACCATGCATAGAGGG TCCTGCGATCGGAATTGACCTCGGAACTACGTACTCATGCGTTGGTATTTGGCTGCATGATCATGTTGAAATCATAGCCA ATGATCAGGGTAACAGGACTACCCCGTCCTATGTGGCATTCACCGATACTGAACGATTGATCGGCAGTGCTGCCATGAAC CAGGCCGCTATGAACCCAATGAACACCGTTTTCGATGCTAAGCGTTTGATGGGTAGGAGGTTTATGGATGATTTGGTGCA GAATGACATTAAATCGTGGCCGTTCAAGGTGATGCCTGGCCCTGGTTACAGGCCAATGATTGTAGTGAATTACAAGGGGG AGGTGAAGCGGTTTTCTCCGGAGGAGATATCTTCCATGGTTCTCACGAAGATGAGAGAGATTGCGGAGGCCTATCTTGGT ACCACTGTAAAGAATGCGGTGATTAGTGTGCCCGCTTACTTCAATGACTCTCAGCGTCAGGCTACCAAGGATGCCGGCGT CATTTCTGGCCTCAATGTGATGCGAATCATCAATGAGCCTACTGCGGCTGCCATTGCCTATGGACTCGAACTCGACAAGA AAGGCATTGCCACCAGCGCTAAGAGGAACGTTCTCATTTTCGACCTTGGTGGTGGGGCTTTTGATGTCTCGCTTGTTACC ATGGCGGAAGGTAGCTTCGAGGTGAAAGCCACCGCGGGTGACACTCACTTTGGGGGTGAGGAATTTGACAACAGAATTGT GAACCATTTTGTTGAGGAATTCAGGTGGAAGAACAATAAGGACATTAGCGGAGATGCCACCGCTGTTAGGAAGTTGAAGA CCGCATGGGAGAAGGCGAAGAGGATACTATCATTCACTGATGAAACCACCATTGAGATTGATTCTCTGTATGAAGGCATT GAGTTTTCCACAAACATCTCTCGTGCGCGGTTCGAAGAGCTGAACAAGGACTTGTTCAGGATGTGTATGGAGCGTGTAGT GATGTGTTTGAAAGATGCAAAGATGGAAAAGAGAAAGGTGGACGATGTTGTTCTTGTTGGCGGATCCACGAGGATGCCAA AGGTTCAGCAGTTATTGCAAGAGTTCTTCAATGGCAAGGAAGTTTGCAAGAGCATCATTAACCCTGAGGAGGCTGTTGCC TATGGTGCTTCTGTCCAGGCTGCAATTTTGAGTGGAAAAAAGGGACTGCAGGCTCTTAAATTGCTTGATGTAACTCCACT CTGCATTGGATTTGAGACTGGTGATGGGGATATGCAAGTGTTGATTCCCAGAAATACTAAAATCCCCATTAGGAAGGAGG AGGTTTTTACAACCTCCGCCGATAACCAACCCGGTGTGCTGATTCCGGTTTTTGAGGAGGGTGACCGGATAGTTAGAACT CATGGTCGTCACTACAACAACTTGCTTGGCAAGTTTGTGGTGTCCGGACTCCCTTATTTACCAAAGGGTGCTCCAAAGCT CAATGTTTGCTTCGACATCAATGCTGATGGTATCTTGAGTGTCTCCGCAGAGGACAGAACCATAGGAATGAAGAACATGC TGACCAGAGAGAGGAACAAGATTAGAATCAGCAACGACAAGGTGAGGCTTTCGAAGGAGGCGATAGAGAAGATGGTGAAG GAAGGTGAGAAGTACAGAGAGAGAGTAGAGGCGAAGAATGCTCTAGAGAATTATGCGGATAACGTGAGGAAGATGATCAA GGATTATGATATGATTGGCTCAGAGTTTTCAGCTGATGATAAGAAGAGGATTGAAGATGCAATTGAGCAGGCTATGCAAT GGCTTGATGGGAACAAACTTGCCAAGACTAATGAATTTAAGGAGAGGAAGAAGGAGGTGGAGAGTATCTGCAACCCCATC ATCTTAGCTAAGATGAATCAAATGTTTGATTAA
Protein sequence (LotjaGi1g1v0375100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPGNEGSNIVSEWQKSRCLALTPCIEGPAIGIDLGTTYSCVGIWLHDHVEIIANDQGNRTTPSYVAFTDTERLIGSAAMN QAAMNPMNTVFDAKRLMGRRFMDDLVQNDIKSWPFKVMPGPGYRPMIVVNYKGEVKRFSPEEISSMVLTKMREIAEAYLG TTVKNAVISVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLELDKKGIATSAKRNVLIFDLGGGAFDVSLVT MAEGSFEVKATAGDTHFGGEEFDNRIVNHFVEEFRWKNNKDISGDATAVRKLKTAWEKAKRILSFTDETTIEIDSLYEGI EFSTNISRARFEELNKDLFRMCMERVVMCLKDAKMEKRKVDDVVLVGGSTRMPKVQQLLQEFFNGKEVCKSIINPEEAVA YGASVQAAILSGKKGLQALKLLDVTPLCIGFETGDGDMQVLIPRNTKIPIRKEEVFTTSADNQPGVLIPVFEEGDRIVRT HGRHYNNLLGKFVVSGLPYLPKGAPKLNVCFDINADGILSVSAEDRTIGMKNMLTRERNKIRISNDKVRLSKEAIEKMVK EGEKYRERVEAKNALENYADNVRKMIKDYDMIGSEFSADDKKRIEDAIEQAMQWLDGNKLAKTNEFKERKKEVESICNPI ILAKMNQMFD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 24 | 648 | 625 | 0.0 | – | |
| PANTHER | 24 | 648 | 625 | 0.0 | ||
| PRINTS | 28 | 41 | 14 | 1.6E-70 | – | |
| Pfam | 29 | 641 | 613 | 3.1E-209 | ||
| SUPERFAMILY | 29 | 210 | 182 | 1.72E-67 | ||
| Gene3D | 30 | 407 | 378 | 8.4E-159 | – | |
| ProSitePatterns | 32 | 39 | 8 | - | ||
| PRINTS | 56 | 68 | 13 | 1.6E-70 | – | |
| PRINTS | 78 | 86 | 9 | 1.6E-70 | – | |
| Gene3D | 91 | 138 | 48 | 8.4E-159 | – | |
| PRINTS | 166 | 186 | 21 | 1.6E-70 | – | |
| Gene3D | 214 | 395 | 182 | 8.4E-159 | – | |
| SUPERFAMILY | 221 | 412 | 192 | 6.28E-58 | ||
| ProSitePatterns | 226 | 239 | 14 | - | ||
| PRINTS | 232 | 242 | 11 | 1.6E-70 | – | |
| Gene3D | 258 | 335 | 78 | 8.4E-159 | – | |
| PRINTS | 360 | 376 | 17 | 1.6E-70 | – | |
| ProSitePatterns | 363 | 377 | 15 | - | ||
| PRINTS | 393 | 413 | 21 | 1.6E-70 | – | |
| Gene3D | 408 | 540 | 133 | 2.2E-36 | ||
| PRINTS | 418 | 437 | 20 | 1.6E-70 | – | |
| SUPERFAMILY | 418 | 576 | 159 | 4.84E-39 | ||
| PRINTS | 504 | 520 | 17 | 1.6E-70 | – | |
| Gene3D | 550 | 647 | 98 | 3.8E-24 | ||
| Coils | 568 | 588 | 21 | - | – | |
| SUPERFAMILY | 570 | 644 | 75 | 1.14E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0375100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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