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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0435600 |
| Transcript ID | LotjaGi1g1v0435600.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carboxypeptidase A6; TAIR: AT5G42320.2 Zn-dependent exopeptidases superfamily protein; Swiss-Prot: sp|Q8N4T0|CBPA6_HUMAN Carboxypeptidase A6; TrEMBL-Plants: tr|K7KSJ5|K7KSJ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0435600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:92999664..93007596) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAACATAAACATGATTAAGCAAAGAATTTCAGAATTAATTAATCAAGTTAACAACTACTACTACGTATAAAATAAAA TTACAAGAACGATGATGAAGAAATGAAACTGTAGATCTTGCCTACCATGGCGGATCTTCTTTCTCTCTCATGTTTTCTCT TCTTCTCAATCTTCCTCCACTCTCTTCATCTTCATCTTCATGTTCATGGCGAATCAAACAATCAAACTTCCATCACGCAA ATCAACCACGATCTCTACCATTCCAGGTAACAAACTTGATCTACCTTAATTCCTCACCTTCCATAGATTTGAATTTAAAT TGCTCAATTTCGTAATTCAATTACAGAAATCGGTATCTTAGAATTTCACAATTCACGTGTTACATAATCATCGTTAAATT CCGGTTACGATTTAGTTCAATCAATCTGAACAACGCTCTCTCAATCGATAGTTTTCCTTGAATTGTGTAGGAATTGATTT GTTTCTATTTTTACCTCTGTGCAACTGACTGAATTTATCAATTGTCATGTGCATATTAGTTTTTGTGAGTTGATGAAGTA CTGAGCTTGATTTTTTTTTTGTGAAACTTGATTATTTGTTTGTTGAAGCATTTTTTGTTTGTGGAATTTTCTGCAGTGAC AATTTGATGGAGGAGATTAGGGCCTTGGTCCATCGTCATTCGGATAAACTCACTGTGGAGACACTTAGAGCTGGAAACAA AGGATATGGCGCTGAGGTTCCGGTGGTTACTTATTGCAAGCGGAAAAAAGAGAATGATGAGAGATTGAAGCTTCGGATAC TTCTTGTAAGCTTTCTATATATTAATTGGTTTTGGTGGTAAACTTTCGTGTTAGAAGATTGTTAGTACTGCAAATAGTTG TGTGTTGTCTACTAGATTCTCCTTCGAGAGTTGAATGCCAACAAGGGAAGAAATTGTGATAATATAATAGCTAATTTGTA GTGGGGGCGTTCTTTTAGAGAAAGCTATAATAATTAAGCTTGTAGTGGATAGTTATCTCAAATTGGTTATTCTGGTGTTT TTGACAGATGATTCCTTGTCTTCCAGAGTTTTGGGCAGCATGGAAGGGAGCTGATTACCACAGAACTTGCTTTAAGGATT TTGTCTATTCTAAGTGAAGAACAATTTCTACCCGGCATGGATCAAGCTTCCTTAAACAGTACACTTGACAAGCTAGTCAT AAAAGTAAGTAAAAATTTCTGCCATAAGTATGTGATAAACTGATAATCATGAAATCCATTATGGAACTGAGCTCTGATTA TCATGATGCTACTAAAATATATGAAGTATTCCCACTCTGTCCCATGAGTTCCACATTGAAGCTTTAGACTTACGTACTTC TACTAAGTGTAATAGAATTTAGATGAGAAATATATGCATCTGTAGTCTGATACAGTTAACAGGAGAGATTTGGTATCTTT TCAGTGCTGATGTCTAATTGCTTAACAGGTAGTTCCGATGGAAAACTGGAATGGCCGCAAACTTGTTGAGGCTGGAGATC TTTGCGAGAGAAGAAATGGTCTTTTTTTCCCCTTTGTAATGTTTAGTGTAATAATTGACTAGCTTTGAAACCTGAGTTTA TATTATGTTGCAGGCAGAGGAGTTGATCTCAACCGGAACTGGAGTGTAGACTGGGGAAAAAAGGAGAAGGTTTGTTATGT GTCTTCAATCTATCTGTCCATGCCATAAACTTTGTTAATTAATGGTGCTTTTACTGTGCCCAGTATTGACTTGCACCTAG TAGATAGATTGTGATAACAACATAGTGTGACACTTGAAGGGGCTTTAGCCAGATGATTTTTCTCATTCTTCCTACTATCT GGATGTCAATCTGTGCACTGATCTCTTTATTTTCTGCCAATATGTCAAATCGTGTGATGTTTTTGAAGTATTTTTTTTTC ATTTTAATAATTGTTCAAATCTATAGGATTATGATCCTTATGAGGAGAATCCTGGACTCGCTCCATTTAGCGAGCCTGAA AGTCAACTTATGCGGAATCTTGCGATATCTTTTCAACCGCATATATGGGTCAATGTGCACTCTGGAATGGAAGTAAGTTT GCTTCATTTTTCAGCTGTTTGTAGAAATCAAATTCAATGTTCCCATATACTTTTTATCTGTATCCATGCTATAATTCAGG ATGTGCACATTATGTATCCCAAGCAGGAAGAATACACTCTGATAGATCTATTAGCATCATGCATCAATTTCTTCATGATG GTTCATTTGATGTTTGGAGAACTCCAGTGGCTTAAAACCATGTTTTCTCCATATTTTGTTGAAAAATACAAGAACTATCT TTAGTTGAAATTTTCTAGCTTGACACGCATTACAATAGAATCTTCCTAAAGCATGAATTTTTCACATATGCAGGCTCTTT TTATGCCATATGATCATAAAAATAGAACACCTGATGGGTTGCCATTGCAACGGATGAAGTTGTTGCTTGAAGAAGTAAAC CAGCTTCATTGCCAAAAGCGTTGCATGATTGGGTCTGGAGGCGGTTCCGTAGGGTTAGTTGATTTTTATTTGAATATGAT CATCATAGCTTGATTTTTATTTGAATCTGATGATATCTGATACAAATTTTCACTAGGCCAAATGTTTGTGTTTTGTATAT ATGTTTGCTTTCTGTTTCCTGTCTTATTGGGTAGAATAAAAAATAGTGATTCTGTAGGATTAGTTTATTTGTACTGGAAT ATGATTAATGACTGTAAAAAGGTTTCTTACTTTCACTAATTACATTTTTTCCTGCCTTCTACTGCTTTTGATAATTTGGA GTTAAAAGAATGAAAATGGTAAAGTTTAAGAGTACAACATACCTGATCTGTTTCAGTGCTTCAAATTGACTGGCTTGAGG TAGTCAAATGACGCCTTTGCAATGCTGTCAATAGTCTATATACTTCAGTCCTTCCTCAAGTTTAGAATTTGCTCATCCAG GTATTTTGCTCACGGGACTGCAACAGATTTCATGTACGACATCGTGAGGGTTCCCATGGCTTTCACATTTGAGGTATGCC AGCAGGATCTCTTTCCTTTTTCGTATTATAGCAATTTTGTTCTAGGGGAGTACTAACATCTTATATTGACGGGCAGATAT ACGGAGATGGAACAGCCTCATCAAAAGACTGTTTTAAAATGTTTAATCCAGTTGACCTTGCTAGCTACAACGTATGTTAC TTCAAAACTTCTCGGCAATGATCACTCCATTAGTCCATTCGTTCTAAGTTTATTTGGAACCTGTTTCTTCTTCCTTTATA TGCAAAGTGTTTAAGAAAGTAAAACGACAGTGATCCTAATGTTTGGCATTTTTTTCATTTTCAGAGAGTTCTCAGTGACT GGTCTGCAGCATTCTTTACGATTTTTAAATTGGCACCACTTCAGCTTGGTGAGTCTGTCTTGAAGTTGGATAAGTTGGTA TCAATAGATGAATATCTAGATGGGTATTTGATGGAGAGGAGAAATAGATACGGAAAAAAGATAGAGGTGCTTGAGCTTGG AATGCAAGAAATAAGAACGTATTTCAGGCTCTTTTTACTATCTTCAGTTTTACTATTGTTCATGTTTTGTTCTAGAATTT CAAAAAGTAAGTGTAGACCAATTGTTGCTGCTATGCCCCTATAAAATTAGGTCGTAGCTGAAAATGTACATTCAATTTTG AGAAAAAAAGTTACAAGTCAAATTGTTCTGTATTTCAATGTAACGCTTCTTCACATGAGCTGATTCTTTATTGTGTTCAA CTAAGGAGCCGGTAATTGGTCTCCATTGATATGTAAAATAACTCCATAGTTATTTATTGATTCATCTAATTTTCAAAGTA GAAATAACAGGACTTATAGTATGTCCGAATCAGTTTCTCTTTTATCATAATCAATTTTGAAAATAATTGATTCTTAAGTC AAAATCAATTTTAGATTTGGGGAGAAGCTTCTATAAGTAATTGACACTGGGAATGACAATGTAATTGAAATGCTGACACA CTAAACTCTTCCTTTAACGTATGAGCTTTAATTACAATAAACACAGTATTACATTAATCCCAAAGATTGATAGATACATA GTACAACATTACCGTAAGCCAGTTAGTTTTCTAATTGTTCTCTGCATGAAGGAAGGGGGATGTTATTTCAGCAACTTCAT TTCTCATTCAGACTTGTTGGTGCACATATTTCCAGGATGACAAACCACGCAAATGCATCCTGCCGAATCGTCTGTACTAG TCTCAAAGACTTCAACTGAATCATAATATTGTTATTACATTACAACAACAATTCAACCTTTTCCCACTAGGTAGCACACA CCTATATGGATCCATGGATCCTATTATATCCTGTCAGATAACGTTCACAGAAAGTTCATAGTTTGTACTAATACAGCAAA ACAAACATGAAAAACTCAAAAATTGTTTATGAAAATCAACATACAGCCACCTCTTATCACATTAGCAACATATTTTACTA TGTTTTGATCAAGATTATCAATGTCAAATTCATATTTTGATGGATGAATTTATAAATCTTTTTCGTTGGGTGTATCATGT ATGCTTGGAAATTAAGAAGGCAAAAAAATGCAATTGTAAGCAGAGGTAGCAAGTTAGCACTAACCTTCAGAACTAGATTA ATGTACACCACGTGATCCGATTCGACTGTGTTTAGGCTATATTAATGTGCTTGATAATTTATGATTTAAGTGTCTGTCTC ATGTATCTAAGAGCAGACCGCAGCATTGCTCTAGCCTTTCTATCTGGAGTGCATCCAGACGAAACCATTTCTTCATACAC AGCGGGGACCTGAAACCCAAATGATGCATCATAGTTTTGCAATGAAGTTGAGTGACCTAAAGTCACAAATAAACTAATAA ATATACAACTTTCACCGGAGTCTTGTTTTTCATCCGTGAAAAATCACACTATCATCCATATTAGGCATGATGTGGAATGC GAATGATACTTAAGATATAAAAAACACAGCAAAAGACCAAATCCATGCCAATTTTTAAGTTGAAAAATCATTATTTTCCA TTGATTGGTTTACTGTGAGTCACCATAGCTTGGGGAATACATACCAATATGAACGACATCTACAGAAAAAGGTAATACTT GGAATTCTAAAAATGGGGGCGTGCTAAAAAGCCTACAACAATTCCCCTTGGTGGGGTACATCATGCAAGACGGAAGGATT ATGATTATTTATGAAAACACAGAAGACAAGCTGAAAGTAGTAATATTATATAATGTACCTTGTGGAACTTGTCAACACGA ATCAAGGCTTTCATAAGTGTAGTATAGGTAACTACATCAGGTTGCAAGTCCTGTAGTTAATATGAGCGAAAAGATGCCTA AGTACTTTACCAGAGACAATTATTAACATGTAAAACATTTAGCCATAAAAGAGAAAGAAAAACATGCTAAAAAAGCCATA CATTTTCTTTCATGTACTGCAGCACAGCAAAGGCCTCAGGATCCCTTCTATCTTCACCAAAAGCATTGATCAATGAATTG AGAGCTAAAAGACTGGGTGTTAGACCCTCAGCTGTCATCTTCCTGAAAGCGTTTACTGCTTGATCAGACAGACCCTGCCC AAATTACGTCAAATAATACCAAAATCATTACCTAACCAATCCATTCATCAAATCTGAGTTAGTGCATTCTGGTCTAGTCC CATAGCTTGTGCCATGTGTTTCTCAATGGAGGAAGATTAAAGAACAAGGGAATCAGAAATTTCGTAGCAGAAAAAATACA TTTGATGCCTGTCAGCTCAGCACCAGAATGGTTCTCAAGGTTTTTGAAAAAGAACCTGTTCATAGTGCTTGATCCATTCC CAATGCATAATAAGTACAGACAGGGAATTTATCATGGTTCAATTGAGTAACTTGGTACAGAATTGTAAACTAGGATAATG CAATCAGCATATTGGTATATAAGGATCCATGATTAATTATACTAGGATTTGAAGCATTAAACAATTTCTGGGGCATATGG TGAAAGAACTCACAAAACAGCATCCTACATACCCTTTGCGCGTATGCATTGATCAGGGCATTATACATGGTTGGAGTTGG CTTGAATCCCATAGATTTCAAGACCTCCAAGCACTCTAACGCGTCATTAAACCTTCCTGACTTTCCATACACATCAACAA GGGTTGTAAACGTTACCGCATTCGGCAGCAATCCCTGACTCTGCATCCTAGTTAACAAATCACTCACTTGGTCCCACTTT TCCTGTGCCCCCATAGAATTGATCATGATATTATAAGTCAAGACACAAGGGGAGTATCCCTTCTGCTGCATTTCCTGAAA CAACTCCTCTGCTCTATCATGGTACCCGGCCTTACAATGACAATCTATCAGCGTGTTCCAAGTAACCGTATCGGGTCGAA TCTCCTCCGACAACATTCGCTCGAACGTTGCCATAGCATGATCAAGACAATTGAACTTCCCAAAAGTATCAATCATCACA TTGTAAAAATGCCTATCAGGCTGCACCCCATTACTCTTCATCTCCTTCAAAACCTGAAACGATTTCTGCCACTCCCCCTT GTCGCGATAACCCGCCAAGATTCTGCTATAAACATACGAATTAGGCGGCAAATTACTCGCCTCCATCTCCTTCAACACGA TCCTCGCACTCTCCCACCTTCCGGCTTGCGCATACGCATCCACCAACATGCTATAAGTATGCTCATCAGGCAAAACACCA CTCCTCTCCATCTCAGAAACCACAAACTCAGCATCCCTCAGCGAGCCCGTCTTCACATACCCTTTGAGCAGGGCATTGAA AGCCCTCGTTCTAGGCTCCATCCCATTCTCCTTAATCTCCTCAAACAGCGCCTCCGCCTCCGCGGTCCGGCCGGAGTTCC CCAAAGCAAGGATAACAGCCACAAGGGTGCTTGATTTTGGACTCAGCCCGTTCCCCTGAGCCACAGCGAGGAAGTGCATT GCCCGAGTCGGGTCACCGGCTTTGGAGAATCCTAGAATGATGTCGTTCAGAAGATGAGCATCAGCTTCAATCTTATCACT CTCAATCTCCCTGTATAGCTTCTGCAAAATGGGGGAATCGATTATGTTGGAGTGCGTGAGGGACCTGATGATGGAGCTGT AGTTGACAAAATCTGGGTGGAAACCGTCGCGGCGCATGCGGGACATGAGGTTGAGCGCTTTCTCGAGGTCGCCGTTGCGA GCACAGGCGGCGATGAGGGCGTTGTAGGTGAGAGGAGTCAGCGTTTGCCGCTGAGAGAGCAAGAACGCTTCGTAGAGCTT CTCGGAGCGGCCAAGAGCGTGGATGAGGATGGAGTAGAGAAGCTCGTAGGAGAAGCAGAGGTTGTGCTTCTGGAGCCATG AAACGACGGCGTAGGCTAGGGTGATGGAGGAGGCGGAGGAAGAGGTGGAGGAGCAGAGGGATTTGAGGAGAGCGTGCCAG AGCGGAGCGGGGACGGCGCGGTAGGACTCGGCGAGGTGGAACTCGGTGGAGTCGAGGGAGGTGGGGGAGGGAGAGTCGGG GTCGGGGGAAGGGGAGTTGGAGAGGAAGTTGAGGAGTGGGGTGAAGTCGTAGCGGCGGTTTTGGAGGGCGAGGATGTCGT CAGGGCCGTCATCGACGATGATGGGTGTGGCGGAGGAGACGGTGGCGTGTGGTTGGAAATGGAAGAGGTGGTGGCGGAGG CGGATGGGGGAGTAATTGAGGTGGTGGGTTGAAGAAGGGAAGATAGTGGGTGGAGTAGAAAGTTGTGGTGTCAGAGCCAA CATGTTATCATGAAACCAGTCACACAGTGAGATAGAACAGGGAAGCTTGTTCGTTTATGACCACACCAAGCTTGGAGAAG ACACTTTATTTTTTCTTTTCTTTTCTTTACTTTTCTTTTCAAGTTATATATACAAAAAACAATTAATGAGAAAGAACAAC CTTCTCATCTTCC
CDS sequence (LotjaGi1g1v0435600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGATCTTCTTTCTCTCTCATGTTTTCTCTTCTTCTCAATCTTCCTCCACTCTCTTCATCTTCATCTTCATGTTCA TGGCGAATCAAACAATCAAACTTCCATCACGCAAATCAACCACGATCTCTACCATTCCAGTGACAATTTGATGGAGGAGA TTAGGGCCTTGGTCCATCGTCATTCGGATAAACTCACTGTGGAGACACTTAGAGCTGGAAACAAAGGATATGGCGCTGAG GTTCCGGTGGTTACTTATTGCAAGCGGAAAAAAGAGAATGATGAGAGATTGAAGCTTCGGATACTTCTTAGTTTTGGGCA GCATGGAAGGGAGCTGATTACCACAGAACTTGCTTTAAGGATTTTGTCTATTCTAAGTGAAGAACAATTTCTACCCGGCA TGGATCAAGCTTCCTTAAACAGTACACTTGACAAGCTAGTCATAAAAGTAGTTCCGATGGAAAACTGGAATGGCCGCAAA CTTGTTGAGGCTGGAGATCTTTGCGAGAGAAGAAATGGCAGAGGAGTTGATCTCAACCGGAACTGGAGTGTAGACTGGGG AAAAAAGGAGAAGGATTATGATCCTTATGAGGAGAATCCTGGACTCGCTCCATTTAGCGAGCCTGAAAGTCAACTTATGC GGAATCTTGCGATATCTTTTCAACCGCATATATGGGTCAATGTGCACTCTGGAATGGAAGCTCTTTTTATGCCATATGAT CATAAAAATAGAACACCTGATGGGTTGCCATTGCAACGGATGAAGTTGTTGCTTGAAGAAGTAAACCAGCTTCATTGCCA AAAGCGTTGCATGATTGGGTCTGGAGGCGGTTCCGTAGGGTATTTTGCTCACGGGACTGCAACAGATTTCATGTACGACA TCGTGAGGGTTCCCATGGCTTTCACATTTGAGATATACGGAGATGGAACAGCCTCATCAAAAGACTGTTTTAAAATGTTT AATCCAGTTGACCTTGCTAGCTACAACAGAGTTCTCAGTGACTGGTCTGCAGCATTCTTTACGATTTTTAAATTGGCACC ACTTCAGCTTGGTGAGTCTGTCTTGAAGTTGGATAAGTTGGTATCAATAGATGAATATCTAGATGGGTATTTGATGGAGA GGAGAAATAGATACGGAAAAAAGATAGAGGTGCTTGAGCTTGGAATGCAAGAAATAAGAACGTATTTCAGGCTCTTTTTA CTATCTTCAGTTTTACTATTGTTCATGTTTTGTTCTAGAATTTCAAAAAGTAAGTGTAGACCAATTGTTGCTGCTATGCC CCTATAA
Protein sequence (LotjaGi1g1v0435600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADLLSLSCFLFFSIFLHSLHLHLHVHGESNNQTSITQINHDLYHSSDNLMEEIRALVHRHSDKLTVETLRAGNKGYGAE VPVVTYCKRKKENDERLKLRILLSFGQHGRELITTELALRILSILSEEQFLPGMDQASLNSTLDKLVIKVVPMENWNGRK LVEAGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGLAPFSEPESQLMRNLAISFQPHIWVNVHSGMEALFMPYD HKNRTPDGLPLQRMKLLLEEVNQLHCQKRCMIGSGGGSVGYFAHGTATDFMYDIVRVPMAFTFEIYGDGTASSKDCFKMF NPVDLASYNRVLSDWSAAFFTIFKLAPLQLGESVLKLDKLVSIDEYLDGYLMERRNRYGKKIEVLELGMQEIRTYFRLFL LSSVLLLFMFCSRISKSKCRPIVAAMPL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 4 | 17 | 14 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Phobius | 23 | 393 | 371 | - | – | |
| PANTHER | 26 | 423 | 398 | 1.9E-172 | – | |
| PANTHER | 26 | 423 | 398 | 1.9E-172 | – | |
| Gene3D | 38 | 324 | 287 | 3.9E-51 | – | |
| SUPERFAMILY | 40 | 346 | 307 | 5.29E-51 | – | |
| SMART | 44 | 315 | 272 | 1.0E-37 | ||
| Pfam | 89 | 318 | 230 | 2.9E-24 | ||
| CDD | 98 | 320 | 223 | 4.44508E-108 | – | |
| Phobius | 394 | 411 | 18 | - | – | |
| TMHMM | 394 | 411 | 18 | - | – | |
| Phobius | 412 | 428 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metallocarboxypeptidase activity | Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi1g1v0435600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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