Domain Predictions — View

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PF00246

Source: Pfam

Description

Zinc carboxypeptidase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0004181 View details of GO:0004181 AmiGO InterPro QuickGO	Molecular function	Metallocarboxypeptidase activity	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.	Subterm of GO:0004180 GO:0008235
GO:0006508 View details of GO:0006508 AmiGO InterPro QuickGO	Biological process	Proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.	Subterm of GO:0019538
GO:0008270 View details of GO:0008270 AmiGO InterPro QuickGO	Molecular function	Zinc ion binding	Interacting selectively and non-covalently with zinc (Zn) ions.	Subterm of GO:0046914

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v2292790.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: carboxypeptidase B2-like [Glycine max] gi\|356517366\|ref\|XP_003527358.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.630.10 IPR000834 NON_CYTOPLASMIC_DOMAIN PF00246 PTHR11705 PTHR11705:SF81 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00631 SSF53187 SignalP-noTM_EUK TMhelix TRANSMEMBRANE cd06227	17
Lj5g3v1914090.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: carboxypeptidase D-like [Glycine max] gi\|356534031\|ref\|XP_003535561.1\|	Domains G3DSA:2.60.40.1120 G3DSA:3.40.630.10 IPR000834 IPR008969 IPR014766 NON_CYTOPLASMIC_DOMAIN PF00246 PR00765 PS00133 PTHR11532 PTHR11532:SF54 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00631 SSF49464 SSF53187 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE cd03858	22
LotjaGi1g1v0435600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carboxypeptidase A6; TAIR: AT5G42320.2 Zn-dependent exopeptidases superfamily protein; Swiss-Prot: sp\|Q8N4T0\|CBPA6_HUMAN Carboxypeptidase A6; TrEMBL-Plants: tr\|K7KSJ5\|K7KSJ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0435600	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.630.10 IPR000834 NON_CYTOPLASMIC_DOMAIN PF00246 PTHR11705 PTHR11705:SF119 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00631 SSF53187 SignalP-noTM TMhelix TRANSMEMBRANE cd06227	17
LotjaGi1g1v0435600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carboxypeptidase A6; TAIR: AT5G42320.1 Zn-dependent exopeptidases superfamily protein; Swiss-Prot: sp\|Q29NC4\|CBPA1_DROPS Zinc carboxypeptidase A 1; TrEMBL-Plants: tr\|K7KSJ5\|K7KSJ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0435600	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.630.10 IPR000834 NON_CYTOPLASMIC_DOMAIN PF00246 PTHR11705 PTHR11705:SF119 SM00631 SSF53187 TMhelix TRANSMEMBRANE cd06227	12
LotjaGi1g1v0435600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carboxypeptidase A6; TAIR: AT5G42320.1 Zn-dependent exopeptidases superfamily protein; Swiss-Prot: sp\|Q29NC4\|CBPA1_DROPS Zinc carboxypeptidase A 1; TrEMBL-Plants: tr\|K7KSJ5\|K7KSJ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0435600	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.630.10 IPR000834 NON_CYTOPLASMIC_DOMAIN PF00246 PTHR11705 PTHR11705:SF119 SM00631 SSF53187 TMhelix TRANSMEMBRANE cd06227	12
LotjaGi1g1v0435600.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carboxypeptidase A6; TAIR: AT5G42320.1 Zn-dependent exopeptidases superfamily protein; Swiss-Prot: sp\|Q29NC4\|CBPA1_DROPS Zinc carboxypeptidase A 1; TrEMBL-Plants: tr\|K7KSJ5\|K7KSJ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0435600	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.630.10 IPR000834 NON_CYTOPLASMIC_DOMAIN PF00246 PTHR11705 PTHR11705:SF119 SM00631 SSF53187 TMhelix TRANSMEMBRANE cd06227	12
LotjaGi5g1v0287600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carboxypeptidase; TAIR: AT1G71696.2 carboxypeptidase D; Swiss-Prot: sp\|Q9M9H7\|SOL1_ARATH Carboxypeptidase SOL1; TrEMBL-Plants: tr\|I1NH52\|I1NH52_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0287600	Domains CYTOPLASMIC_DOMAIN G3DSA:2.60.40.1120 G3DSA:3.40.630.10 IPR000834 IPR008969 IPR015567 NON_CYTOPLASMIC_DOMAIN PF00246 PR00765 PS00132 PS00133 PTHR11532 PTHR11532:SF73 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00631 SSF49464 SSF53187 SignalP-TM SignalP-noTM TMhelix TRANSMEMBRANE cd11308 cd18172	26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd18172	CDD	1	14.29