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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0443800 |
| Transcript ID | LotjaGi1g1v0443800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pyruvate decarboxylase; TAIR: AT5G54960.1 pyruvate decarboxylase-2; Swiss-Prot: sp|P51851|PDC2_PEA Pyruvate decarboxylase 2; TrEMBL-Plants: tr|Q84V95|Q84V95_LOTCO Pyruvate decarboxylase 1; Found in the gene: LotjaGi1g1v0443800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:94153109..94156021) extracted from Lotus japonicus Gifu genome v1.2.
ATGGACGTAAAGTTAGGTTCTCTCGACACAACCAAGCCAGCAAGCAACGACGTCGTTTCATGCGCCACCGCCAACCACAC CACGGCGATCCAGTCCTCGATCCCATCAACGGCGGTGTCCACCTGCGACGCCACGCTCGGCCGCCACCTCGCGCGCCGCC TAGCTCAGATCGGCGTCACCGACGTGTTCTCCGTCCCCGGCGACTTCAACCTCACGCTGCTCGACCACCTCATCGCTGAA CCGCAGCTCAACCTCGTCGGCTGCTGCAACGAGCTCAACGCTGGGTACGCCGCTGACGGCTACGCTCGAGCACGCGGCGT CGGCGCCTGCGTCGTGACGTTCACCGTCGGTGGACTCAGCGTGCTCAACGCTATTGCTGGAGCTTACAGTGAGAACTTGC CCCTCATTTGCATCGTTGGTGGGCCGAACTCCAACGACTATGGAACCAGCAGGATCCTTCATCATACCATTGGGTTGCCG GATTTCACACAGGAGTTGAGGTGTTTTCAGACTGTTACTTGCTTTCAGGTACCAAATCTCAAACTGGGTCTCTTTCTTTT TTCTGTATTTGGAATGTTGGGTTTGGTTATGAATTTCCTTTTTTGCTAGTTCTTGATGTGAGAATTGATGGTTAATTTGA GGTTTATTCAATGATATAGTTTATATCATGAGGGTTTAACTTTTAAGCATAAGATTATTTATATAAACTCACTTGAGGAA CTTATTGAACTAAATAAGCTTATAAGCTTAATCAAATAAGGCCCAATTTGGAACAACTTATTTGAGCTTATCTGATATAG CATAAGCGCTTGTGTAAGTGTTTGAGAGAGCTTATGCAAACCGCTTATGAGCTTATGCAAACAGCTCAGGATAGCTTATG AATAAGCGAAGAACTTAATTAAGTTGTTTTTCCAACGCTTAATTGTAAGATAAAGCACAAATAAGCTCTTGAAAAGCTCT TCTAATAACCCATTTGATGTCACTTTAAGTTTGTTGTAGTGGTGGGTTTGTATTTCTGTGTTGTGAATTTGATGAGATGT TTGTTTAATGGGTTTTGGTAATTTGTTGGTTGGTTTGGTTGTAGGCTGTGGTGAATAATTTGGAGGATGCTCATGAGCAG ATTGATACAGCAATCTCAACTGCACTGAAAGAGAGCAAGCCTGTGTATATAAGCATTAGCTGTAACTTGCCTGGGATTCC TCATCCTACTTTCAGCCGCGATCCTGTTCCTTTTTCATTGTCTGCCAAGTATGTCATTTTTTTTTGTCCATTATTAACTG GTTTGTGGAGAATCCAGTTATGGGAAATATTGATTTTTAACTATTTTGGTTTGGGTGGTTTGCAGATTGAGTAACCAGAT GGGGTTGGAGGCAGCAGTAGAGGCAACTGCGGAGTTCCTTAACAAGGCTGTGAAACCAGTACTTGTGGGTGGTCCTAAAC TGAGGGTTGCAAAAGCATCTGATGCCTTTGTTGAACTAGCTGATGCAAGTGGTTATGCTCTTGCTGTGATGCCATCAGCT AAAGGGCAAGTTCCAGAGCACCATCCCCATTTCATTGGAACTTATTGGGGTGCTGTGAGCACTGCATTCTGTGCTGAGAT TGTGGAGTCTGCTGATGCGTATTTGTTTGCTGGTCCCATTTTCAATGACTACAGCTCTGTGGGGTACTCACTTCTTCTCA AGAAAGAGAAGGCAATCATTGTGCAGCCTGATCGCGTTGTGATTGCCAATGGGCCTGCATTTGGGTGTGTGCTGATGAAG GACTTCCTCAAGGCACTTGCGAAGCGTCTCAAACACAACAATGCTGCATATGAAAACTACCACAGGATATTCGTCCCTGA AGGGAAGCCTTTGAAGTCTGCACCGAAAGAACCTTTGAGGGTTAATGTTATGTTCCAGCATATACAAAAGATGCTGTCTG GTGAAACAGCTGTGATTGCTGAGACAGGGGACTCATGGTTTAACTGCCAAAAGCTGAAATTGCCAAGAGGGTGTGGGTAA GTATCTGAGAGAATGTGATTTGTTGTGTTTCTCATGTTTTTCATGATGTTTATAGTATTGATAAAAATAATATTGATAGG TATGAGTTTCAAATGCAATATGGCTCAATTGGATGGTCTGTTGGTGCAACCCTTGGCTATGCACAGGCAGTCCCTGAGAA GCGAGTGATTGCTTGCATTGGTGATGGAAGCTTTCAGGTTTGTCATGCATAACTACTTATAGCATATGTTTGGATCAACT TATTTTTCTCTGAATCAATTCTGATACCCTGAAGCTACTCATAGAAGCTTCTTCTCAGAATTCATTTTGGCTTCAAATCA TACACTTAAAGCATGATTTCAATCAAAATGCAATTTATTTTTGTTTCGGTGTTTTAAAGTTTCTCTTAATCTTCACTTCT AGACAATGCTTGAACTGAACATTGTGTTTTTATCTTTCTTTAAACTGCTTTGCAGGTGACTGCTCAGGATGTATCGACAA TGCTGCGATGCGGTCAAAACACCATCATCTTCCTGATAAACAATGGTGGATACACCATCGAGGTTGAAATTCATGATGGG CCATACAATGTGATTAAGAACTGGAACTACACTGGGCTGATTGAAGCAATCCACAATGGTGAAGGGAAATGCTGGACTTC CAAGGTGAGTTTCTTGACATGGTTTAATCCTCTCAAACTACGCTTCTGTAACATGGAGAAGAAGTGCTGATCTTGTATCT ATTCATGGATTATTCATTTCAGGTCTTCTGTGAAGAGGAGCTAGTTGAAGCAATTGCAACTGCAACAGGACCAAAGAAAG ATTGCTTATGCTTCATTGAGGTGATTGTTCACAAGGATGATACCAGCAAAGAGTTGCTTGAATGGGGCTCCAGGGTCTCT GCTGCCAATGGTCGTCCTCCCAATCCTCAGTAA
CDS sequence (LotjaGi1g1v0443800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTTGGAGGCAGCAGTAGAGGCAACTGCGGAGTTCCTTAACAAGGCTGTGAAACCAGTACTTGTGGGTGGTCCTAA ACTGAGGGTTGCAAAAGCATCTGATGCCTTTGTTGAACTAGCTGATGCAAGTGGTTATGCTCTTGCTGTGATGCCATCAG CTAAAGGGCAAGTTCCAGAGCACCATCCCCATTTCATTGGAACTTATTGGGGTGCTGTGAGCACTGCATTCTGTGCTGAG ATTGTGGAGTCTGCTGATGCGTATTTGTTTGCTGGTCCCATTTTCAATGACTACAGCTCTGTGGGGTACTCACTTCTTCT CAAGAAAGAGAAGGCAATCATTGTGCAGCCTGATCGCGTTGTGATTGCCAATGGGCCTGCATTTGGGTGTGTGCTGATGA AGGACTTCCTCAAGGCACTTGCGAAGCGTCTCAAACACAACAATGCTGCATATGAAAACTACCACAGGATATTCGTCCCT GAAGGGAAGCCTTTGAAGTCTGCACCGAAAGAACCTTTGAGGGTTAATGTTATGTTCCAGCATATACAAAAGATGCTGTC TGGTGAAACAGCTGTGATTGCTGAGACAGGGGACTCATGGTTTAACTGCCAAAAGCTGAAATTGCCAAGAGGGTGTGGGT ATGAGTTTCAAATGCAATATGGCTCAATTGGATGGTCTGTTGGTGCAACCCTTGGCTATGCACAGGCAGTCCCTGAGAAG CGAGTGATTGCTTGCATTGGTGATGGAAGCTTTCAGGTGACTGCTCAGGATGTATCGACAATGCTGCGATGCGGTCAAAA CACCATCATCTTCCTGATAAACAATGGTGGATACACCATCGAGGTTGAAATTCATGATGGGCCATACAATGTGATTAAGA ACTGGAACTACACTGGGCTGATTGAAGCAATCCACAATGGTGAAGGGAAATGCTGGACTTCCAAGGTCTTCTGTGAAGAG GAGCTAGTTGAAGCAATTGCAACTGCAACAGGACCAAAGAAAGATTGCTTATGCTTCATTGAGGTGATTGTTCACAAGGA TGATACCAGCAAAGAGTTGCTTGAATGGGGCTCCAGGGTCTCTGCTGCCAATGGTCGTCCTCCCAATCCTCAGTAA
Protein sequence (LotjaGi1g1v0443800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLEAAVEATAEFLNKAVKPVLVGGPKLRVAKASDAFVELADASGYALAVMPSAKGQVPEHHPHFIGTYWGAVSTAFCAE IVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRVVIANGPAFGCVLMKDFLKALAKRLKHNNAAYENYHRIFVP EGKPLKSAPKEPLRVNVMFQHIQKMLSGETAVIAETGDSWFNCQKLKLPRGCGYEFQMQYGSIGWSVGATLGYAQAVPEK RVIACIGDGSFQVTAQDVSTMLRCGQNTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLIEAIHNGEGKCWTSKVFCEE ELVEAIATATGPKKDCLCFIEVIVHKDDTSKELLEWGSRVSAANGRPPNPQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 371 | 371 | 9.2E-254 | – | |
| Gene3D | 1 | 159 | 159 | 6.0E-64 | – | |
| PANTHER | 1 | 371 | 371 | 9.2E-254 | – | |
| SUPERFAMILY | 4 | 149 | 146 | 7.2E-32 | ||
| Pfam | 7 | 123 | 117 | 3.1E-19 | ||
| Gene3D | 165 | 353 | 189 | 5.4E-54 | – | |
| CDD | 172 | 354 | 183 | 3.47413E-90 | – | |
| SUPERFAMILY | 172 | 364 | 193 | 1.02E-41 | ||
| Pfam | 217 | 342 | 126 | 1.8E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Thiamine pyrophosphate binding | Interacting selectively and non-covalently with thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases. |
Expression pattern of LotjaGi1g1v0443800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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