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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0459100 |
| Transcript ID | LotjaGi1g1v0459100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 4-hydroxybenzoate octaprenyltransferase; TAIR: AT4G23660.1 polyprenyltransferase 1; Swiss-Prot: sp|Q93YP7|COQ2_ARATH 4-hydroxybenzoate polyprenyltransferase, mitochondrial; TrEMBL-Plants: tr|G7KY71|G7KY71_MEDTR 4-hydroxybenzoate polyprenyltransferase, mitochondrial; Found in the gene: LotjaGi1g1v0459100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:96257740..96263887) extracted from Lotus japonicus Gifu genome v1.2.
AGGCCCTTCATTCTAGAGTGTGTGGGTGAAATCAGAAATGTGTGCAGCAGAGACAAACAACAGAGCAGACAAAAACCAAG AGAGAAAGACGGTGGTCGGAGCTTCAGCGACTCCGGCGAGGCGCGGCTGATTCAATTGACGGCGCGGCGAGTTCGGCACA CACTGACACGCAGTGAGAAATGCAAGGTAACACTCATTGGCGGAACCAACTGTGCTGCAACTGCAACCTGTGTGTATAGC TTACCTTACCCCTATTCTTATTCACTCTTTCTATCACCATGTTTTCTCTTTCTCTGTATCCCAAATTCTTCATGTCAATG AATGCTGGAAACAACTAGTTTGATTAGTAAATGAACATCATTTTTTGTTTGTTTGTTATAATATAGAAAAGTAATGTGAT TAGTTCTATTGTTGTCAATTAGATAATTCAAGTTTCCTAGAATTTCAATTTCCTCAGAATTTTCAAATGCTGAAATGCAT AATCCAAACATAGTCTAATTGTTCTTTTTTATAAATTTGTTGCAGAATTATCAGGGAAGGTTGTTAGTCCATTGTGGTTG TGGGTTTGAAACCTTGGTACTTCACTACATATTTTGATTTTTGAACTCTATTTCTTGCTCTTCCTGTAATTGAATTCTTT GAAGAACAGAACCCCCACTTGTTGCATTTGACAAAATGGTGTCAGCTTTGGTCTCTCGTGCTTCGCATAGGTTCCTCAAA TCTTCTCTCATTTCTTCTATCTCCTCCAAATCTCCTTACCCCTCCATCTCCAATCCATTGATCTCCTCTAAACAATTTGT AGAACGAAAACCTGGTCTGAATCTTCTACTCAGTCCTTTCAAGCCACCCCACCGTCAAATTTCTAATGTTGAATTTTGTA GAAGTGTTAGATCTCTCCCGAATATCCAGTTTATTGTGCACATCTCTACATCGCCTTCAAGTTTAGGAAACGGTTCAAAG GAAGATAAGAATCAAAGAAGTAATGTGAGTAGTGGAGTGGATATCTCTTGGATCGACTTGTACTTGCCTAGGCGGGTTCA GCCCTATGCTCGGCTTGCTCGGCTTGATAAGCCAATTGGAACATGGTTGCTTTTATGGCCTTGTATGTGGTAAGATTTTT TGTTTACTTATATTGTATTATTATGTCTAAACACTCTTGATGACAACATGGAGAGCTTAATAGTTTTTATCATATAACTG GATTGCTAGTTCGAAATGTGTGTAACACCTTTAAAATTGGTAGTGAGTTGATGAAATTTCAAAGGCCACGCACGAAGTTC CGTCTTTTCATTTGTTTTGTAAATGTGCAACTTAATTTATTTTATATAGTTGTTATGCTTAGATTATTCTTCTTTCTCTT TTGAGAAATTCTAAATTCCTACCATAGGTCAATTGCCTTAGCTGCACCCCCTGGTCACCTTCCTGATTTTAAAATGTTGA CTCTGTTTGGATGTGGAGCATTGCTTTTAAGAGGAGCTGGGTGTACTATAAATGATCTGCTTGATCGGGATATTGATACA AAGGTCAGTACGGTTGTCTTTTCTTTCTCTTTTTTGTAAAGGATCACAGGCATCCTTCATAGAAAACAAACCTGCTTGAG TCGACAATGACCACTACGGGCCTTTGTCAATCTGTAGCTGCCTTTTCTTTTTGTTGCAGTGTTTTTTTGGCAACAAAAGA TGCCGAAATAGTAATGTGTGTTGTAAATTAGTATAAGAGATCATGATCTGAAGCTAATTTAATAGATATTGATAGAAAAA TGATCTGAAAGCTAAGTCATGCCAAGACTAGTGCTTTAAGATTTCATATGGTCTGTAAGTTCATCTTTATTTTCTTTAAT TTAGATGGACAACTTGCTTATCATGTTGCTTGTATCCTGATTTTTTCCTGTCTTCTAGTAGGATTTTTTGTCTTCCTTTC TTTCTACTTAACATTAATATCATCCTATTATTGAACTTATATTGCGTTTTAAAAAATGCCTTTGCTAGATTGTGCATTTG AGGGTCTAAGTGACGGATAAGAGAGGACTAGATTCAGGTTGAATAAAACGGCCTAATAGATATAATTTTCATACCGTAAA ATATGCTAGAACAAGTAACTTATAGGCATGGTTATAGATGATGAAAGCCCTCTATTACATTAACTCAATATTTCCCATCC ATTAGGATAACACCGGAGACATTGGTTGGTGTCTTATTTAATTTAATTTTATTGCTATACGGTATAACCCTTGTGATATT TTTTTGACTGAAGCACTTTATGTTTATTGAGCATATGATTGAGGTTAATGTCACACTTCTTCCCTTGACTTTTTCAGAAA TAATGCAGGTAGAACGTACAAAGTCAAGACCTGTGGCAAGTGGTCTTTTGACCCCATTTCAAGGACTCTCTTTTCTTGGA TTTCAATTGCTTTTGGGTCTTGGAATACTTTTGCAACTAAATAATTATAGGTTAGTAAATTTGAATTGCCAAAATGGGTC TATGCGTATTATGTTGGGACGTAGACGATTGAATATGTAATATCTTGATTAGCTAAGAAGAAGATATCGCCTTTCTTGAT CCATAATCTGTGGTGCATGTCCTTCATTATGGTAGTCTGATCCTGATCACAAAAGCTGGCAAATACCATATTATTTTGAT ATTTAATAAGATTAAAGACTGTATAGAGTTTCTGAAACTAATTTACCTAGATTGTTCCCTTCAAGAGACCTTGAAAATAT TAAATAATGGGAGGAAAGTAGGTTAAAATGATATGCACAGAATGTGAAAAATAATCTCTTTTGAACTTCTGGCACGTAGA GCAGGTAACTGTTTCTTTATTACCAAGACTGTTTATTAAAGTAGCTTAGCAGTTGCGTCTCCTGCATATTAGCCTCTACT GCATATTAGTGTTAGTCATTATCGAAATTGATTCAATTGCACAAGGAAGACATATCACTGGCTATGTCCACTACCAAACC CTATCTAAGAAAGAAGATAAAGCGTTTCTATGAAGTATTTAATTATTTATCCTGCTAAACTGAAAACATTGTTGTTTTCA GGACAAAGACTGATCCCTTTCTTCAAAAAAGAGTTTTGCTTCAAGTAACTTGCGATTGCTATGCATCCCTATATTTTAGT GTGCATGTTGTCATTATCTCATTTGCAGGCATATTTAAATTGAGATGAAGTGTGAATGAATGAATCTTGCTAAGATTTCT AATATTTTTTTGGCTTGCATACCACAGCCGTGTTTTGGGTGCTTCGTCCTTGTTTCTCGTCTTCTCCTATCCCCTCATGA AGAGGTTTACATTTTGGGTAATGATTTTCCTCATTTCTAATTTCTTCTGACTGGTTTTGTTTTTGTTATTACCTTTGATG CATAATCTCATTATGATTTTATATGGTGCTCTGATGCTATATTGGTTAGCCTCAAGCCTATCTAGGGTTGACCTTTAATT GGGGGGCTTTGTTAGGATGGGCAGCAATTAGAGGAAGTCTGGATCCATCTATCGTGCTGCCACTTTATGCCTCTGGAGTT TTTTGGACCCTTGTGTATGATACTATTTATGCACATCAGGTAAAAACAGCATTTCTTCTTGAAAGATGTAAGCCCTGTGA TTTTGCTCCTCTGTTCTGTCTTTTCATTGTTTCTTATTGGCTTAGTGTCTGGGATCTGGTAAGAAGAGGGCTTTACGGGG TTTTTGCTTCTTATTACTGCACTTCTTCATGTTGATGGGCTTAAAATGCTCTCCTTCAGATATGGGGGGTGTTGAAGTAA TGATATGATTTGCATTTCAACCATGTTCAGACGATTATATTGTCTCTAACAGTTTAGGTGTTATGGAACAAAGAATACAA TGACAAGACTGCTTGGTATTGTTCACATGAATAAAGCAGTGTAATCAAAATTCTTGTACTGTCTAATGATGTTTTCTAAC TTTGGCATGCAGGATAAAGAAGATGACCTGAAAGTGGGAGTTAAATCAACAGCTTTACGCTTTGGTGATTTGACAAAGCA ATGGATTACTGGTTTTGGGTTTGCATGCCTTGGTAATCTTGCTCTCAGTGGTTTTAATGCTGAACTAGGTATCTTTTTAT AAATATCATCCTGTTCTCTTTTTTCATGACTATTTGGGTTACAATGATGGTTTTTTTTTGACCTCCTGATTCATATGACT GGAGCAGGTTGGCCATATTATGCATGTCTGGCAGCTGCATCCGGACACTTGGGCTGGCAAGTATGGACAGTTGACCTTTC ATCGCGTGCTGATTGCAATAGGAAGTATGTTTGGCAGGATTTTGTGCATATGTTAATGATTTAATTATCCAAAAGCCCAT CTTCTGATAGGATCTCAAACATTACTTTATTGGCTTGAACATCAGCTGGAGTGTCATAATGTTTTTATTTTTCTAATGGC CATGCCATGAAAAAGCAAATTTGAGATTATCATAAACTTTTTCAAAATTCAATTTCAGTTTTTTAAAAACTTAATTTTAT GACTTTGCTACTAAGACTTGATGGCATATTTAGTTTTATGTCCTCAGAGCTCAACATAGGAAACCCTCCAAAATGTAGTG TTTGCTCTATTTTTCTGTTAGTTACTTTTCAGGCGTTTTAATGTGGATTGCAATATGGTAAAAAGCTTCTGATGTATTGA TTAGCTTAATTACAATATAAAGTTCATTTCAATTCTCTTAAAATTAAACATGATGACCTGATTTTTGTACCTTTTTTTCC CCCATCTCTTCAGATTTGTCTCAAATAAGTGGTTTGGAGCTATCATATTTGGTGGGATCCTTGCTGGGAGGCTTTCATCA TAGTGGTAAATTTTGCCTATAATATAGTAATAACAAATCAAACATTGTGCGCATTCCAAATATGACCTTCCTAGGACAAT CTGATTACATCTTTGTACACTTCTGTACATTTCTCTTCTATACCATGTTTTAAAAGACCACTTCGTATTACATGTTTGAA CATGTTCTAATATCATTAGTTTTATCAAAATCTAGTTTCCGTGCTAGTCAACTAACTCTTTGACACACTTTTTTACTTTT AATCACACTTCTTAGTATATGAGGAAAGTATGATGTCGCAAGATTACCCCACCTAGTGGGAAAGTACTTGGTTGTTGTTA TTGTTTTATTATTGAGTAATTTTTATGTGGATCCCCTTAATTTTTAGTGAAACTCGTTAATTTTTCTCAATAATAAAGCG CGTGTTAGAAAGCATGTGTCATAGCGGATGTTAATGTTAGTATTCCTGTAATTAAACTCGAAGGTTGAAGCTAATGGAGG CACTTATGTGTCATAGTATGTCAATGGCAATTTGTTGTAGGGCTAACTAGTTGATTGACTTGATTAACTAGTTACTAAAT ATTTTTCTTCATTATATCTGCAGAAGGCACTGTGAGCTTACATGAATAAGACTTGAAAGAAGTAGATGATTGTCTTTTGG TGTGCAAAACCTGGACACTGCATCTCCTTAGACTTGAGGTTGTGACTTGTGACCAAGAAATCAACAGGGAACCTGCCCAG TTTGAATTACGAGAAAATACTCTGCGAGTGGGAGATGCCAATGCACAGTAGCTGCCATTTGAAGGTTCAAACTATGGAGT CAGTGAATGTTCAGGGGCGGAGTATAGAGTATTGATAGGTGCCCTTAGTTAATTAGTTATTTACTTAGTTGTGATAGTTT TAGTTAGTTTGAGAGAGTGAGAGAATGTTATAAATAAGAGACTTAGAGAGAAATAACATCTTTAGGGTCATTGGGAATTG GGAGAGGCCATGCTCTCTCGAATAACCTGTAAATTCTTAGTGTTACTTCAGTTTACTTTCTTCTTTAATGGCTGGTACCT ATCAATTAGTCCACTCGGGTCTGGACGAGTAAAAGGGCATCATATTTGTTACATGATGACTTTCATATTGATTATTGGCA GTACATGGGGTATTTTCCATGTAAGAAAAATCAGACACATTGAAAAACTTGTAATACAATTCAAGAACAAGATTGAAAAT GAAAGTTGCTACAAAGATTCGTTTCTCTGTGTTGACAATAGAATAAAGCACATATTTGTGGAATGTTGTTACTAATGTTT GCAACATATGTAGACTTCCATTATTGATTAATGTCCATGCTTTCGTTTTCCATAGTTAATAGCATGCC
CDS sequence (LotjaGi1g1v0459100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTCAGCTTTGGTCTCTCGTGCTTCGCATAGGTTCCTCAAATCTTCTCTCATTTCTTCTATCTCCTCCAAATCTCC TTACCCCTCCATCTCCAATCCATTGATCTCCTCTAAACAATTTGTAGAACGAAAACCTGGTCTGAATCTTCTACTCAGTC CTTTCAAGCCACCCCACCGTCAAATTTCTAATGTTGAATTTTGTAGAAGTGTTAGATCTCTCCCGAATATCCAGTTTATT GTGCACATCTCTACATCGCCTTCAAGTTTAGGAAACGGTTCAAAGGAAGATAAGAATCAAAGAAGTAATGTGAGTAGTGG AGTGGATATCTCTTGGATCGACTTGTACTTGCCTAGGCGGGTTCAGCCCTATGCTCGGCTTGCTCGGCTTGATAAGCCAA TTGGAACATGGTTGCTTTTATGGCCTTGTATGTGGTCAATTGCCTTAGCTGCACCCCCTGGTCACCTTCCTGATTTTAAA ATGTTGACTCTGTTTGGATGTGGAGCATTGCTTTTAAGAGGAGCTGGGTGTACTATAAATGATCTGCTTGATCGGGATAT TGATACAAAGGTAGAACGTACAAAGTCAAGACCTGTGGCAAGTGGTCTTTTGACCCCATTTCAAGGACTCTCTTTTCTTG GATTTCAATTGCTTTTGGGTCTTGGAATACTTTTGCAACTAAATAATTATAGCCGTGTTTTGGGTGCTTCGTCCTTGTTT CTCGTCTTCTCCTATCCCCTCATGAAGAGGTTTACATTTTGGCCTCAAGCCTATCTAGGGTTGACCTTTAATTGGGGGGC TTTGTTAGGATGGGCAGCAATTAGAGGAAGTCTGGATCCATCTATCGTGCTGCCACTTTATGCCTCTGGAGTTTTTTGGA CCCTTGTGTATGATACTATTTATGCACATCAGGATAAAGAAGATGACCTGAAAGTGGGAGTTAAATCAACAGCTTTACGC TTTGGTGATTTGACAAAGCAATGGATTACTGGTTTTGGGTTTGCATGCCTTGGTAATCTTGCTCTCAGTGGTTTTAATGC TGAACTAGGTTGGCCATATTATGCATGTCTGGCAGCTGCATCCGGACACTTGGGCTGGCAAGTATGGACAGTTGACCTTT CATCGCGTGCTGATTGCAATAGGAAATTTGTCTCAAATAAGTGGTTTGGAGCTATCATATTTGGTGGGATCCTTGCTGGG AGGCTTTCATCATAG
Protein sequence (LotjaGi1g1v0459100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSALVSRASHRFLKSSLISSISSKSPYPSISNPLISSKQFVERKPGLNLLLSPFKPPHRQISNVEFCRSVRSLPNIQFI VHISTSPSSLGNGSKEDKNQRSNVSSGVDISWIDLYLPRRVQPYARLARLDKPIGTWLLLWPCMWSIALAAPPGHLPDFK MLTLFGCGALLLRGAGCTINDLLDRDIDTKVERTKSRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNYSRVLGASSLF LVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAIRGSLDPSIVLPLYASGVFWTLVYDTIYAHQDKEDDLKVGVKSTALR FGDLTKQWITGFGFACLGNLALSGFNAELGWPYYACLAAASGHLGWQVWTVDLSSRADCNRKFVSNKWFGAIIFGGILAG RLSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 133 | 133 | - | – | |
| PANTHER | 54 | 403 | 350 | 2.9E-167 | ||
| PANTHER | 54 | 403 | 350 | 2.9E-167 | – | |
| Hamap | 117 | 402 | 286 | 29.049 | ||
| TIGRFAM | 122 | 400 | 279 | 1.6E-110 | ||
| CDD | 128 | 400 | 273 | 1.2854E-116 | – | |
| Phobius | 134 | 151 | 18 | - | – | |
| TMHMM | 134 | 151 | 18 | - | – | |
| Gene3D | 136 | 283 | 148 | 6.5E-42 | – | |
| Pfam | 139 | 383 | 245 | 1.9E-57 | ||
| Phobius | 152 | 162 | 11 | - | – | |
| TMHMM | 161 | 183 | 23 | - | – | |
| Phobius | 163 | 183 | 21 | - | – | |
| ProSitePatterns | 180 | 202 | 23 | - | ||
| Phobius | 184 | 202 | 19 | - | – | |
| Phobius | 203 | 224 | 22 | - | – | |
| TMHMM | 203 | 225 | 23 | - | – | |
| Phobius | 225 | 229 | 5 | - | – | |
| Phobius | 230 | 248 | 19 | - | – | |
| Phobius | 249 | 256 | 8 | - | – | |
| TMHMM | 252 | 274 | 23 | - | – | |
| Phobius | 257 | 274 | 18 | - | – | |
| Phobius | 275 | 285 | 11 | - | – | |
| TMHMM | 281 | 303 | 23 | - | – | |
| Gene3D | 284 | 403 | 120 | 5.2E-12 | – | |
| Phobius | 286 | 303 | 18 | - | – | |
| Phobius | 304 | 323 | 20 | - | – | |
| Phobius | 324 | 345 | 22 | - | – | |
| Phobius | 346 | 350 | 5 | - | – | |
| TMHMM | 349 | 371 | 23 | - | – | |
| Phobius | 351 | 371 | 21 | - | – | |
| Phobius | 372 | 382 | 11 | - | – | |
| Phobius | 383 | 402 | 20 | - | – | |
| TMHMM | 383 | 402 | 20 | - | – | |
| Phobius | 403 | 404 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Prenyltransferase activity | Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring alkyl or aryl (other than methyl) groups | Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi1g1v0459100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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