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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000537
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We have found 44 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.279s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0082139.1
n.a. PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like [Glycine max] gi|356546073|ref|XP_003541456.1| chr0 32199165 32203721 -
2 domain predictions
2 GO terms
Lj0g3v0103129.1
n.a. PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like [Glycine max] gi|356546075|ref|XP_003541457.1| chr0 43971334 43973104 +
2 domain predictions
2 GO terms
Lj0g3v0207399.1
n.a. PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like [Glycine max] gi|356506430|ref|XP_003521986.1| chr0 103642110 103664587 +
2 domain predictions
2 GO terms
Lj0g3v0207399.2
n.a. PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like [Glycine max] gi|356506430|ref|XP_003521986.1| chr0 103642110 103665886 +
2 domain predictions
2 GO terms
Lj0g3v0207399.3
n.a. PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like isoform X1 [Cicer arietinum] gi|502150266|ref|XP_004507870.1| chr0 103664077 103665886 +
2 domain predictions
2 GO terms
Lj0g3v0269659.1
n.a. PREDICTED: 4-hydroxybenzoate polyprenyltransferase, mitochondrial-like [Glycine max] gi|356566810|ref|XP_003551620.1| chr0 139686873 139689562 -
2 domain predictions
2 GO terms
Lj0g3v0271809.1
n.a. PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like [Glycine max] gi|356546073|ref|XP_003541456.1| chr0 140843212 140847833 +
2 domain predictions
2 GO terms
Lj0g3v0294529.1
n.a. PREDICTED: homogentisate phytyltransferase 2, chloroplastic-like [Cicer arietinum] gi|502154985|ref|XP_004509919.1| chr0 153061892 153066042 -
2 domain predictions
2 GO terms
Lj0g3v0318259.1
n.a. PREDICTED: probable homogentisate phytyltransferase 1, chloroplastic-like [Glycine max] gi|356537075|ref|XP_003537056.1| chr0 166182759 166189716 -
2 domain predictions
2 GO terms
Lj0g3v0320339.1
n.a. PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like [Glycine max] gi|356546075|ref|XP_003541457.1| chr0 167177022 167183325 +
2 domain predictions
2 GO terms
Lj0g3v0361429.2
n.a. PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like [Glycine max] gi|356506430|ref|XP_003521986.1| chr0 190365159 190369634 -
2 domain predictions
2 GO terms
Lj1g3v2372140.1
n.a. PREDICTED: chlorophyll synthase, chloroplastic-like isoform X2 [Cicer arietinum] gi|502104212|ref|XP_004492466.1| chr1 27737620 27743628 +
2 domain predictions
2 GO terms
Lj1g3v2372140.2
n.a. PREDICTED: chlorophyll synthase, chloroplastic-like isoform X2 [Cicer arietinum] gi|502104212|ref|XP_004492466.1| chr1 27737620 27743628 +
2 domain predictions
2 GO terms
Lj1g3v2536080.1
n.a. PREDICTED: 4-hydroxybenzoate polyprenyltransferase, mitochondrial-like isoform X1 [Cicer arietinum] gi|502104585|ref|XP_004492586.1| chr1 29172629 29178203 +
2 domain predictions
2 GO terms
Lj1g3v2536080.2
n.a. Para-hydroxybenzoate-polyprenyltransferase [Medicago truncatula] gi|357506705|ref|XP_003623641.1| chr1 29172629 29178203 +
2 domain predictions
2 GO terms
Lj2g3v3132450.1
n.a. PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like [Glycine max] gi|356506430|ref|XP_003521986.1| chr2 40435559 40457569 +
2 domain predictions
2 GO terms
Lj2g3v3133590.1
n.a. PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like [Glycine max] gi|356506430|ref|XP_003521986.1| chr2 40469349 40489804 -
2 domain predictions
2 GO terms
Lj4g3v0363530.2
n.a. PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like [Cicer arietinum] gi|502142159|ref|XP_004504820.1| chr4 4744068 4746112 +
2 domain predictions
2 GO terms
Lj4g3v0363530.3
n.a. PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like [Glycine max] gi|356528024|ref|XP_003532605.1| chr4 4744068 4746112 +
2 domain predictions
2 GO terms
Lj4g3v2120440.1
n.a. PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like isoform X1 [Cicer arietinum] gi|502150266|ref|XP_004507870.1| chr4 29023591 29028748 +
2 domain predictions
2 GO terms
Lj5g3v0380030.1
n.a. PREDICTED: homogentisate phytyltransferase 2, chloroplastic-like [Glycine max] gi|356500395|ref|XP_003519017.1| chr5 3535868 3538843 +
2 domain predictions
2 GO terms
Lj5g3v2291460.1
n.a. PREDICTED: protoheme IX farnesyltransferase, mitochondrial-like [Glycine max] gi|356576869|ref|XP_003556552.1| chr5 33521781 33530605 +
2 domain predictions
2 GO terms
Lj5g3v2292490.1
n.a. PREDICTED: protoheme IX farnesyltransferase, mitochondrial-like [Glycine max] gi|356576869|ref|XP_003556552.1| chr5 33537042 33545800 -
2 domain predictions
2 GO terms
Lj6g3v2116900.1
n.a. PREDICTED: probable homogentisate phytyltransferase 1, chloroplastic-like [Glycine max] gi|356537075|ref|XP_003537056.1| chr6 24708312 24715520 +
2 domain predictions
2 GO terms
LotjaGi1g1v0035800.1
n.a. Homogentisate phytyltransferase; TAIR: AT2G18950.1 homogentisate phytyltransferase 1; Swiss-Prot: sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase; TrEMBL-Plants: tr|I1MSP5|I1MSP5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0035800 LjG1.1_chr1 4938798 4972147 -
2 domain predictions
2 GO terms
LotjaGi1g1v0035800.2
n.a. Homogentisate phytyltransferase; TAIR: AT2G18950.1 homogentisate phytyltransferase 1; Swiss-Prot: sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase; TrEMBL-Plants: tr|I1MSP5|I1MSP5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0035800 LjG1.1_chr1 4938834 4971911 -
2 domain predictions
2 GO terms
LotjaGi1g1v0036200.1
n.a. Homogentisate phytyltransferase; TAIR: AT2G18950.1 homogentisate phytyltransferase 1; Swiss-Prot: sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic; TrEMBL-Plants: tr|K7KCK9|K7KCK9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0036200 LjG1.1_chr1 5049482 5059804 -
2 domain predictions
2 GO terms
LotjaGi1g1v0102000_LC.1
n.a. Homogentisate phytyltransferase; TAIR: AT2G18950.1 homogentisate phytyltransferase 1; Swiss-Prot: sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase; TrEMBL-Plants: tr|I3SBC3|I3SBC3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0102000_LC LjG1.1_chr1 15533340 15537024 +
2 domain predictions
2 GO terms
LotjaGi1g1v0102200.1
n.a. Homogentisate phytyltransferase; TAIR: AT2G18950.1 homogentisate phytyltransferase 1; Swiss-Prot: sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase; TrEMBL-Plants: tr|K7LZY0|K7LZY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0102200 LjG1.1_chr1 15568724 15588443 +
2 domain predictions
2 GO terms
LotjaGi1g1v0102200.2
n.a. Homogentisate phytyltransferase; TAIR: AT2G18950.1 homogentisate phytyltransferase 1; Swiss-Prot: sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase; TrEMBL-Plants: tr|K7LZY0|K7LZY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0102200 LjG1.1_chr1 15568724 15588443 +
2 domain predictions
2 GO terms
LotjaGi1g1v0102300.1
n.a. Homogentisate phytyltransferase; TAIR: AT2G18950.1 homogentisate phytyltransferase 1; Swiss-Prot: sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase; TrEMBL-Plants: tr|K7LZY0|K7LZY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0102300 LjG1.1_chr1 15640968 15654222 +
2 domain predictions
2 GO terms
LotjaGi1g1v0102400.1
n.a. Homogentisate phytyltransferase; TAIR: AT2G18950.1 homogentisate phytyltransferase 1; Swiss-Prot: sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase; TrEMBL-Plants: tr|K7LZY0|K7LZY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0102400 LjG1.1_chr1 15707504 15713680 +
2 domain predictions
2 GO terms
LotjaGi1g1v0106000.1
n.a. Homogentisate phytyltransferase; TAIR: AT2G18950.1 homogentisate phytyltransferase 1; Swiss-Prot: sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase; TrEMBL-Plants: tr|K7LZY1|K7LZY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0106000 LjG1.1_chr1 16472726 16490091 +
2 domain predictions
2 GO terms
LotjaGi1g1v0106000.2
n.a. Homogentisate phytyltransferase; TAIR: AT2G18950.1 homogentisate phytyltransferase 1; Swiss-Prot: sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase; TrEMBL-Plants: tr|K7LZY0|K7LZY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0106000 LjG1.1_chr1 16472733 16490056 +
2 domain predictions
2 GO terms
LotjaGi1g1v0443300.1
n.a. Chlorophyll synthase; TAIR: AT3G51820.1 UbiA prenyltransferase family protein; Swiss-Prot: sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic; TrEMBL-Plants: tr|A0A072U0L0|A0A072U0L0_MEDTR Bacteriochlorophyll synthase, putative; Found in the gene: LotjaGi1g1v0443300 LjG1.1_chr1 94059919 94068235 +
2 domain predictions
2 GO terms
LotjaGi1g1v0443300.2
n.a. Chlorophyll synthase; TAIR: AT3G51820.1 UbiA prenyltransferase family protein; Swiss-Prot: sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic; TrEMBL-Plants: tr|A0A072U0L0|A0A072U0L0_MEDTR Bacteriochlorophyll synthase, putative; Found in the gene: LotjaGi1g1v0443300 LjG1.1_chr1 94060186 94065829 +
2 domain predictions
2 GO terms
LotjaGi1g1v0459100.1
n.a. 4-hydroxybenzoate octaprenyltransferase; TAIR: AT4G23660.1 polyprenyltransferase 1; Swiss-Prot: sp|Q93YP7|COQ2_ARATH 4-hydroxybenzoate polyprenyltransferase, mitochondrial; TrEMBL-Plants: tr|G7KY71|G7KY71_MEDTR 4-hydroxybenzoate polyprenyltransferase, mitochondrial; Found in the gene: LotjaGi1g1v0459100 LjG1.1_chr1 96257740 96263887 +
2 domain predictions
2 GO terms
LotjaGi1g1v0459100.2
n.a. 4-hydroxybenzoate octaprenyltransferase; TAIR: AT4G23660.1 polyprenyltransferase 1; Swiss-Prot: sp|Q93YP7|COQ2_ARATH 4-hydroxybenzoate polyprenyltransferase, mitochondrial; TrEMBL-Plants: tr|M5WWI9|M5WWI9_PRUPE 4-hydroxybenzoate polyprenyltransferase, mitochondrial; Found in the gene: LotjaGi1g1v0459100 LjG1.1_chr1 96258445 96262542 +
2 domain predictions
2 GO terms
LotjaGi1g1v0459100.3
n.a. 4-hydroxybenzoate octaprenyltransferase; TAIR: AT4G23660.1 polyprenyltransferase 1; Swiss-Prot: sp|Q93YP7|COQ2_ARATH 4-hydroxybenzoate polyprenyltransferase, mitochondrial; TrEMBL-Plants: tr|B9H5T2|B9H5T2_POPTR 4-hydroxybenzoate polyprenyltransferase, mitochondrial; Found in the gene: LotjaGi1g1v0459100 LjG1.1_chr1 96259126 96263788 +
2 domain predictions
2 GO terms
LotjaGi4g1v0037300.1
n.a. 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TAIR: AT1G60600.2 UbiA prenyltransferase family protein; Swiss-Prot: sp|Q0WUA3|MENA_ARATH 2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic; TrEMBL-Plants: tr|A0A151T2F1|A0A151T2F1_CAJCA Putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Found in the gene: LotjaGi4g1v0037300 LjG1.1_chr4 4528692 4533550 +
2 domain predictions
2 GO terms
LotjaGi4g1v0173700.1
n.a. Homogentisate phytyltransferase; TAIR: AT2G18950.1 homogentisate phytyltransferase 1; Swiss-Prot: sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase; TrEMBL-Plants: tr|A0A151RIZ9|A0A151RIZ9_CAJCA Bacteriochlorophyll synthase 33 kDa chain; Found in the gene: LotjaGi4g1v0173700 LjG1.1_chr4 34833014 34839364 -
2 domain predictions
2 GO terms
LotjaGi4g1v0302800.1
n.a. Homogentisate phytyltransferase; TAIR: AT2G18950.1 homogentisate phytyltransferase 1; Swiss-Prot: sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic; TrEMBL-Plants: tr|G7JUD9|G7JUD9_MEDTR Homogentisate phytyltransferase; Found in the gene: LotjaGi4g1v0302800 LjG1.1_chr4 67764957 67777094 +
2 domain predictions
2 GO terms
LotjaGi5g1v0112700.1
n.a. Homogentisate phytyltransferase; TAIR: AT3G11945.1 homogentisate prenyltransferase; Swiss-Prot: sp|Q1ACB3|HSTC_ARATH Homogentisate solanesyltransferase, chloroplastic; TrEMBL-Plants: tr|A0A0B2NTY3|A0A0B2NTY3_GLYSO Homogentisate phytyltransferase 2, chloroplastic; Found in the gene: LotjaGi5g1v0112700 LjG1.1_chr5 22452230 22458770 +
2 domain predictions
2 GO terms
LotjaGi6g1v0341900.1
n.a. Homogentisate phytyltransferase; TAIR: AT2G18950.1 homogentisate phytyltransferase 1; Swiss-Prot: sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase; TrEMBL-Plants: tr|K7LZY0|K7LZY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0341900 LjG1.1_chr6 65531713 65540250 +
2 domain predictions
2 GO terms