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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0482700 |
| Transcript ID | LotjaGi1g1v0482700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | chromatin remodeling factor; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|Q2HV80|Q2HV80_MEDTR Homeodomain-like; Found in the gene: LotjaGi1g1v0482700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:99602581..99609961) extracted from Lotus japonicus Gifu genome v1.2.
CACTGATTGTGGCTCCTGTTGTATGTTCCTTATTAAAGTGCAAGAAGTAAAATGGAAAACAAGCAACCAAGTCCATAGCT CAAGTACACACTCCACTGCACTCGTTCTCCTCATACGTTTCTCAAGGTACTTTGCAGTAGACACACACAGACTCTGACAA TTCACATAGGAACAAGAGCCTTCAAACTTTGGGGTATGCTCCACTCACTTCTCTATGCTTTCCTATTTTGTAAGCTGCTT CTGTTTTTATTGTTATTATTTTTTTTTTGGGTTCAATCTTTGTCAAAGTTTTCTTTTTTTTGGTAACTGCATGACTTCAA ATTTTCTATCTTTTTTTTTTCTGGGTGGTGTAGAAAATGGCTGAACAGTGAATGAATACTTTAGATTCTTTGGTGTAAAT GGACCCATGTTCTTGTTAGGTTTATCTGCTAGGAATCTCTTTATAAAAAAGAAGAAGATGAAGAAGATAAATGGTGGGGG TTTGTGTCTGATATGTCAAGCTTCAATTTATCTTTGAAGTTCTATTTTTTTTTTTAAAATTCTGTGTGTGGGTTTTGTTT TTCCCAGTTCTTGTTACAGTAGCCCTTTCAAATGGAGCATTTTTGTGCCTGTGCTTTGAAAAACTTGGACTTTCAATGGT GGTAACTTGGTAGAGGTCTAGTTATTGGAGTGTTAATTGTATGGCTTCATGTGGTAGCAAACTGCTTATGATCTTTGTTT GAAGAACAAAGATTCATTTCTTTTTCAAGAACAAGGATTTTTATTTAGGTTAGAGAACCTCACACTTGCCTTTATTGGTC CAGTTGCTGCTATTGGATAAAAAAGATTCTTTCTGAATTTGTGGTTGCCAAAAGAGAAATAGCTCTGAGAGTCATAGTCC CTTAGAGCTTGTGGATGTTGTACCTTATTCAGAGGTGTTTTGAACATGTCTAGGAAGAAAATGATATTTATTTTAGCTTC TTAATTTCTACCTCATTGTCTTGGCAACAATATGTTCTAAGCTTAGATAGTCATTTTAGTTTTGTAAATTTTAGAATTGT ATAGAATATGCAACCTTACATTTTTTTTATCCTGCATATGATAAAACCATTTAAAGATTTTCTACCATTACTATATGCTC CTGGAAGTTTGTAAACTCTAGTGGAGTTTTGAATCCTAATATTTCAACTGCTTGTGGTGAAACTTGTTTATCCTTCTTGC ATGCATTTATATTAGATAATGCTAATTATAATCCATGAAAACTTTTTAACTAAATTACAGGTTAAATTAGAAGGGCACAC AAAAAAGGACTTAAGATTTGCCTTTTAGACAGGATATATATCAACTACATGAGTGTGGGAAGTCCCTAACCTATCTCTCA ATCAAAGGAAGCTCATCCCATGAAGCGCGTAGGATGCCTAGAACTCACCAGTCCAGAATATTATGAATACTGTGAAATAC ATGACATGCAGATTGAATGTGAATACATCTCACGACTCGCAAGACACATCTCTCAAAAAACTTTGAAACTCTAATAGCAT AATATATATTTCCTTTTCTTTAGTGTTTATTTATGAAAATAAATTTGGACATTGTATAGGTTTTAGTATGATGTCTTGAC TCTTAACCCATTCAGTTGATCTCTACCAGTGGGAAAAGGCATTGGTGGTTGTATATCTTAAGCCATTGCCATCTGTTACT GTTTATTGTTTTTTTTTTGGTAACTCTATGTCTTGCATTCCACTTTTAAACCTTTCTTATTTTTTACACTATCGATTCTA AGTCTGTCTTCTTTTTGGGTGTTATTTTTGCATCTACAGGGTCGAGGTCATTTACGCACTTGGTGACTTGCATTTGATTT TGTGTTCAGTGCTCGAAGCCTAGTAGCCAGTAGTGCAGGTGTTCTTATCAGAGTTGTACAAATGTTCGGCAGAAAAGTAT TTCTAACCTACAAAAGGAAGCGACAATCTCAAAGTAGTAGTTTTATCCAAGGTAATTGCTGCCAAACTTCAGTTTGTGAA GAGGCCTGCGATTGTTCTTTATCTACACCAGTTAAACATGACAAGCTAACTGCTGAGAAGGCATCAGAAAAGGATGAAGA AAAACCAATGGTTAGATTCCAACACAACTTCTTGTTTTTGTTTTTTATTTGTTTGTGGATCATCAGGCATGTCTCTGTTC CTCCCCTACAATTCCATATCTGCCGAAATTTGTCAATCCCCTTGTTACTCTAGGGTTTTCATAAACTACTTGTGGGAAGA TAGGTTGATTAATGTATTTCTTCCAAAAATAAATGGTTTTTATGTTTACATAATACTTAATTTAAATGCCTGATCTCTAT TGGCTGTGACAAGTATATTACTCCTATAATTTTCTAAGCTTCTTCTGCTACCATGTAGTATTTTTTGAACCCTCTTCGCT AAATTTCACCTCCGATTTAGTTCTTTCTAGAAGCTTTGCCTCTGCTGGGGATGATCAGGTCAAACCCTTTCCTGTTGAGT TTAAGACTTTGTAGTTGTAATATGCTGTATATCACAAGATAGTGAGAAGGCCTAAATACAAATTTAGGAGTGGGAGAAAA AGGAATGAAGAGAGCTAAATACCAACTAATGAATTTCAACAAATAAAAGGTTTACCTTCTTGTGTAAGTTATATAGGTCA GTTAGGTAAATATCTTAGTTAGATATTTTTAGATATGGGAGCTGAGTTATCAGGGCTACAAAGAATACTGAAGGTGAACT TTCTTTTTCTTTTTGATGAATAGTGAACATGCTAGAAGAATCTATTAACTACAAATTTCATGTCGGTACTCTTGGATTTG TTTGATGTGCTTTCACTGGTGATGTGATGCATTGTGATAGTTGTCATCAATCTTATCATTCTCAATTTCCAAATAAATAT TATGTTTTCTAGTTGCACAATCAGTGTATCTAATGAAAGACTTCCTGTGTTTTTTTTCCATTGTTTTGGCATGATTTGGC TTAATTTTTCTTATATGGAGAGCTCTTATGATTGTCTAAGGAAAGGCTTACTCATCTGTCTATCTTTATATCTCATAGGA TACCAGTGACGGGGAAAATCCGTGCTTTGAATGTGCCAAACAGCCAGACTGTTCATCATCATTTACCATTCAAAAGCCTG ATGACCTTAGGGCAGGGGAGCGTGGAATTAGTGACGCTACAGAAAGTATAGTTTCTAAACAGAAATCTCTTGCAACAAGA ATTCCATGCGAGGATAACTCGAAAAAGGATTTTGGTGAATCACCCCCAGTAGAAAAGGCACAGAATGGTTGTGACACTCA AAGAAATTCTCATGCCAGTGAAAGCTCTGGTAATGAATTTGACAATTGTTCTAATAAAACAATTATTTCCCCGCCAGTTG AAATGGATGCTGGGAATGATCTCAATTTTATCAACTCAGAAACACCCATTGCAAGGGAATTCCATTCTGCACGTAGTGAT GAGTCTCCTGCTTTGAATATTCCAATGGAAGATAATTCACCCTCCAAAGATAATTTCAGGAACCCATCTGGACAAATAGT AACGCAGACCAACTTGACCAGTCCATTAATAACCTTCTATCGACGCTATAAAAGAAAAGAATGTATGGATGGGACTGATA GGAAAAGCAAGTTGCTCAAGAAGGAAAATATTTCAGTGCTGACCAAGTGGAGCAAGCTTGCAAATGCAAATGGTAATTTC TCTTCTTGCGAGGAATCATCGTGTGATGAATGTCCTGTGGATAAGGTACCGGACCTTAACCAATCAGTGGAGCTTTCAGA AAGAGGGAAGCCATCAGATCAAACTGAAGATGAAACATCTTATAGAAACTGTTCAATGCTTTCTGTAACAGACCTTAATC AATCAGCAGAGCTTTCAAAAAGAGGAGAGATTTATCAAACTCAAGAACAGGTATGGCTTCCTGGTGATTCTCTTAAACCT TCTGATTTGTTACTCAAATTTCTTTTTGATTCACAAGTTTTAAGTTTTAAGTTTTAAGATACGCTAAATTTCGGTTAGTT TTTCCAACACATTCTTTTTTTCCTCGTTGCCGATTCTTTACTGGTCAATGCAACCAGTGATATGATTTCTTTCTTCTTCT GTTGAATTTGGATTTTATAAAGAACAATATCTACTTTGAAACAAGGGTTTTATTTTCTTTATTACACTGATTCTTGGTTT AGTGTACTGCAGTGGGACTTTTCATCTCATTCCCATTTAGGTCTGATTTGGATCCCTTCGTTGTTTTCTTTTCCTCCTCC ACCTTCGATGACAGGTGGTTAATGCTGACACCTCATGTACTTGTGGAGTTGTTTCTGAAACCTGGTATAATTTCATCAAA CTTAATAAGCTTGTAATTTTTTTTTATAACTCCAATAGAAAATCATTTATAGCTGGGGGGAAATTGCATACTAATGACTT CATTCTAACAGTATGACACAGGTGAAAGAGGAACTGCATCATGGGGAAGACATAGTTCAAACTGTCTCTCATACATCTGG AACAGAAGTTCCGAGCCAGAGTTGCCTGATTCACGAGGAAACCCAACATCTTCGTACGGATTGTCAAGGAGTCTCTATCA ATACGGATTGTACTCCTGCTGCCACAATTGCTGATCAGGAGCTAGAGAAGTCCCAGCCCTCTGTAAGAGAGGCTGGTTAT AATGATACGCATAATGGCTTGAATAAAAGTGGGGAACCCCAACCCAAATTTGACCTGGCTGTTAACTCTGCAGGTATGAT TTGTCACTTAGTCTTTAACATGTAACGGATGAATCTGAATATTTTGTTCTGTAACCATGAAGTTGTGATTGATAATAATT ATTGCAAAGCTTTAAAATGCATTTTATTTAAAGAGATTAAATGGTATTTTCATGTGGTTCAGAAGAGCGCACTGTTGATT TGAACTCGGTGGCTGACAAGCATCCTCTTGATTTGAGGATAAGAACTGTTGGAGCTAAATTGGACTCTGCAAGCAGTAGA TCTGCCATTGCCGAAGATCATGTTTCTCATCCGGAATTTTTGGACTCTAGAGATACACAGGTAAAATAGGTTGCCTTTAC ATCTCTTTGACTTCAAGAATGAAGATATTTTATATTTTAGAAAGAGCAAATTATAATGTAGGGAAGAATAAACAGATTAC TGATTGTATTTTATTCAAGCAATAAAATTATTATCTCCTCATTTCAAGTGAATGGTCAACAGTTAACCAAAAACTAACTG GATTGGACGTTGTTTTTCTCTAATTAGAAATATGAATATTTTGTCCAAATATTTACTAGACTTCCTAAATTGGAATTTTT TTAATGGTTTATGTGTGGTTAATACTGCTCTTGTGTGCAGCATTTCTCATCCTGTTTAGCTTGTCAAATGTGGGTATTTG TGTGAATATCAACTATGAAGTTCATCTTACATGTTACCTTTTCAAGATGACAGTGCTACCCGTTACTGATATGTGGTTCT CCATGTCCTCTTGAATATGCAGCTGGTTTCAGAAGGAAAGGCTATTGATGGTGTTTGCTCAAGTATTACTCAACCACAGT TATCTGGTTTCATGATGCCTGGTGAAAGTGTGAATGTTCAACAAACAAAAACTAATAAGCCAAGACGCGTGCCAATGATT TCTCTTTCTTTGGGTTTGTCTTTACCCATGGAGCTGAGCACCGGAGGCTGTGACTCCACTAATTATTTGTCTCTATTGCC TTTGTCAAATTCGATCACTGATACTAGAGATTTTGTCCAAGATGGATTATATCATTCTTCAACAAACCGGAAACCATTGC TTCCCAGGCACAAGGTAGTTCTTGACAAAATTGTAAACAGAGCAAGAGCTTTAAATGAGAGAGGCAGCTTTCAAGAAAAT TTAAAACGGAACCCTTTTATATGGTCTGAAGAGGAGTTGGATTTTCTCTGGATTGGTGTGAGAAGACATGGTAGGGGAAA TTGGGTTGCTATGTTAAGGGACCCAAGATTGCGGTTTTCACCATTAAGGGCACCATGGGATCTTGCGGAACGGTGGGAGG ATGAACAAATAAAACTTTTGAAAGACACTTGTGTTCCACAACACATGTATCCAAATGTAGAAAGGCCAACAGCGGCATCT TTGCAAGGAAACTTTTGCTTCCGGCATCTGGAATTAGGATCATGGAGACAAAATACAATGGAGGAGACTAAGCTGTCACC TGAAGATGTAATTTCTTATAGGGAGAGCAACCTCTTGAGGCAATCTCTTGCTGGTTTAAATTATCAAAACGACACTGCGT TACACAGTCTTAGGCCAACTATTCATTCCAGGAGGGCCTCTTACAACAATAACATAGAATGGGGATTTTTCAATTCACCC GGAAGCTCGAGTCTTTCCATGGAAAATTCTTATGCAAATGATTATCCCTTTAACTTCTCAACTGCAAAGACTAATTTGCC CCACTGGCTCAGGGAAGCAGTTACTACTCCTCCAATGTCAGTTGAGCCAAATCTGTCTGCAACTGTTTCATTGAGTTCTC ATCCACATCCAGAGATGCTGGGTGCTGCAGAGCGTTGCTATCATGCTGATAGGTCATGCTTTCTGCCTCAAATTCGGTTA AGTGGCTCGAGGACGAATGAGCAATTCTCTAGAACATCAAATGGTTCTCCTCACTATTCAACATATTCAAGAAGAAAATA TGGGATGATGAAAATGAACAAGCCTCTGCAACAACATCATGTCAGCAAACCAGATGACATGATCATCATCGATAGTGACA CGTCTTCTGAAAAGACCATATCTGATGATAACCGTTCGAGTTTGTAGATCTGAAGAATGTTGGATAACCCTGTGTACCAG TAAAAAGGTTGAGCTGTAGAAAGGTTGTAGGTGAATGTTGCATGGTGTTGTGGATTAGTAGATTGTAAACCTAGTAGATG ATATGACCCTTCTGCTAAATGAATGCTGATTTTTCATTTCAACTGAATTTATTATGGATCTAAAATTGGTAAACATCTAT TTGAAGAAAAAAAAAAGATGACATGCATCATTTATTATTAAGTAAAGGTTGAGAGGGGGAAAACTGGCTGATGTGAGTTT TTTATTATTGCAATAGGTCCAATTTGAGTTTCCCTGCTTATGTGTCCCCAATTTTGACTTAATCAACGCTTATGTGTTGG TTTGCTTGTCTTAGGTGGATTTATTAATTGAGTCTTAGGGGGAAAACGCTTATGAAGAATTGAAGGTGAATTTCACAAAA CCCACAAAGCTGTTTTATGAGTTATGATAATGGTCCACTTTATGAGGACCCTATCGCAGTAGCTTCTTTTAATGCAATGC ACAAATGGGTGGTGTTTCATCTCCTGCTAGCAACAATGGTCAAAATATTAATGGAACCTTACACTATGAAATCCCCTGGG CCCTGGCTGCAAACACCATAG
CDS sequence (LotjaGi1g1v0482700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCGGCAGAAAAGTATTTCTAACCTACAAAAGGAAGCGACAATCTCAAAGTAGTAGTTTTATCCAAGGTAATTGCTG CCAAACTTCAGTTTGTGAAGAGGCCTGCGATTGTTCTTTATCTACACCAGTTAAACATGACAAGCTAACTGCTGAGAAGG CATCAGAAAAGGATGAAGAAAAACCAATGGATACCAGTGACGGGGAAAATCCGTGCTTTGAATGTGCCAAACAGCCAGAC TGTTCATCATCATTTACCATTCAAAAGCCTGATGACCTTAGGGCAGGGGAGCGTGGAATTAGTGACGCTACAGAAAGTAT AGTTTCTAAACAGAAATCTCTTGCAACAAGAATTCCATGCGAGGATAACTCGAAAAAGGATTTTGGTGAATCACCCCCAG TAGAAAAGGCACAGAATGGTTGTGACACTCAAAGAAATTCTCATGCCAGTGAAAGCTCTGGTAATGAATTTGACAATTGT TCTAATAAAACAATTATTTCCCCGCCAGTTGAAATGGATGCTGGGAATGATCTCAATTTTATCAACTCAGAAACACCCAT TGCAAGGGAATTCCATTCTGCACGTAGTGATGAGTCTCCTGCTTTGAATATTCCAATGGAAGATAATTCACCCTCCAAAG ATAATTTCAGGAACCCATCTGGACAAATAGTAACGCAGACCAACTTGACCAGTCCATTAATAACCTTCTATCGACGCTAT AAAAGAAAAGAATGTATGGATGGGACTGATAGGAAAAGCAAGTTGCTCAAGAAGGAAAATATTTCAGTGCTGACCAAGTG GAGCAAGCTTGCAAATGCAAATGGTAATTTCTCTTCTTGCGAGGAATCATCGTGTGATGAATGTCCTGTGGATAAGGTAC CGGACCTTAACCAATCAGTGGAGCTTTCAGAAAGAGGGAAGCCATCAGATCAAACTGAAGATGAAACATCTTATAGAAAC TGTTCAATGCTTTCTGTAACAGACCTTAATCAATCAGCAGAGCTTTCAAAAAGAGGAGAGATTTATCAAACTCAAGAACA GGTGGTTAATGCTGACACCTCATGTACTTGTGGAGTTGTTTCTGAAACCTGTATGACACAGGTGAAAGAGGAACTGCATC ATGGGGAAGACATAGTTCAAACTGTCTCTCATACATCTGGAACAGAAGTTCCGAGCCAGAGTTGCCTGATTCACGAGGAA ACCCAACATCTTCGTACGGATTGTCAAGGAGTCTCTATCAATACGGATTGTACTCCTGCTGCCACAATTGCTGATCAGGA GCTAGAGAAGTCCCAGCCCTCTGTAAGAGAGGCTGGTTATAATGATACGCATAATGGCTTGAATAAAAGTGGGGAACCCC AACCCAAATTTGACCTGGCTGTTAACTCTGCAGAAGAGCGCACTGTTGATTTGAACTCGGTGGCTGACAAGCATCCTCTT GATTTGAGGATAAGAACTGTTGGAGCTAAATTGGACTCTGCAAGCAGTAGATCTGCCATTGCCGAAGATCATGTTTCTCA TCCGGAATTTTTGGACTCTAGAGATACACAGCTGGTTTCAGAAGGAAAGGCTATTGATGGTGTTTGCTCAAGTATTACTC AACCACAGTTATCTGGTTTCATGATGCCTGGTGAAAGTGTGAATGTTCAACAAACAAAAACTAATAAGCCAAGACGCGTG CCAATGATTTCTCTTTCTTTGGGTTTGTCTTTACCCATGGAGCTGAGCACCGGAGGCTGTGACTCCACTAATTATTTGTC TCTATTGCCTTTGTCAAATTCGATCACTGATACTAGAGATTTTGTCCAAGATGGATTATATCATTCTTCAACAAACCGGA AACCATTGCTTCCCAGGCACAAGGTAGTTCTTGACAAAATTGTAAACAGAGCAAGAGCTTTAAATGAGAGAGGCAGCTTT CAAGAAAATTTAAAACGGAACCCTTTTATATGGTCTGAAGAGGAGTTGGATTTTCTCTGGATTGGTGTGAGAAGACATGG TAGGGGAAATTGGGTTGCTATGTTAAGGGACCCAAGATTGCGGTTTTCACCATTAAGGGCACCATGGGATCTTGCGGAAC GGTGGGAGGATGAACAAATAAAACTTTTGAAAGACACTTGTGTTCCACAACACATGTATCCAAATGTAGAAAGGCCAACA GCGGCATCTTTGCAAGGAAACTTTTGCTTCCGGCATCTGGAATTAGGATCATGGAGACAAAATACAATGGAGGAGACTAA GCTGTCACCTGAAGATGTAATTTCTTATAGGGAGAGCAACCTCTTGAGGCAATCTCTTGCTGGTTTAAATTATCAAAACG ACACTGCGTTACACAGTCTTAGGCCAACTATTCATTCCAGGAGGGCCTCTTACAACAATAACATAGAATGGGGATTTTTC AATTCACCCGGAAGCTCGAGTCTTTCCATGGAAAATTCTTATGCAAATGATTATCCCTTTAACTTCTCAACTGCAAAGAC TAATTTGCCCCACTGGCTCAGGGAAGCAGTTACTACTCCTCCAATGTCAGTTGAGCCAAATCTGTCTGCAACTGTTTCAT TGAGTTCTCATCCACATCCAGAGATGCTGGGTGCTGCAGAGCGTTGCTATCATGCTGATAGGTCATGCTTTCTGCCTCAA ATTCGGTTAAGTGGCTCGAGGACGAATGAGCAATTCTCTAGAACATCAAATGGTTCTCCTCACTATTCAACATATTCAAG AAGAAAATATGGGATGATGAAAATGAACAAGCCTCTGCAACAACATCATGTCAGCAAACCAGATGACATGATCATCATCG ATAGTGACACGTCTTCTGAAAAGACCATATCTGATGATAACCGTTCGAGTTTGTAG
Protein sequence (LotjaGi1g1v0482700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFGRKVFLTYKRKRQSQSSSFIQGNCCQTSVCEEACDCSLSTPVKHDKLTAEKASEKDEEKPMDTSDGENPCFECAKQPD CSSSFTIQKPDDLRAGERGISDATESIVSKQKSLATRIPCEDNSKKDFGESPPVEKAQNGCDTQRNSHASESSGNEFDNC SNKTIISPPVEMDAGNDLNFINSETPIAREFHSARSDESPALNIPMEDNSPSKDNFRNPSGQIVTQTNLTSPLITFYRRY KRKECMDGTDRKSKLLKKENISVLTKWSKLANANGNFSSCEESSCDECPVDKVPDLNQSVELSERGKPSDQTEDETSYRN CSMLSVTDLNQSAELSKRGEIYQTQEQVVNADTSCTCGVVSETCMTQVKEELHHGEDIVQTVSHTSGTEVPSQSCLIHEE TQHLRTDCQGVSINTDCTPAATIADQELEKSQPSVREAGYNDTHNGLNKSGEPQPKFDLAVNSAEERTVDLNSVADKHPL DLRIRTVGAKLDSASSRSAIAEDHVSHPEFLDSRDTQLVSEGKAIDGVCSSITQPQLSGFMMPGESVNVQQTKTNKPRRV PMISLSLGLSLPMELSTGGCDSTNYLSLLPLSNSITDTRDFVQDGLYHSSTNRKPLLPRHKVVLDKIVNRARALNERGSF QENLKRNPFIWSEEELDFLWIGVRRHGRGNWVAMLRDPRLRFSPLRAPWDLAERWEDEQIKLLKDTCVPQHMYPNVERPT AASLQGNFCFRHLELGSWRQNTMEETKLSPEDVISYRESNLLRQSLAGLNYQNDTALHSLRPTIHSRRASYNNNIEWGFF NSPGSSSLSMENSYANDYPFNFSTAKTNLPHWLREAVTTPPMSVEPNLSATVSLSSHPHPEMLGAAERCYHADRSCFLPQ IRLSGSRTNEQFSRTSNGSPHYSTYSRRKYGMMKMNKPLQQHHVSKPDDMIIIDSDTSSEKTISDDNRSSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 949 | 949 | 5.8E-221 | – | |
| PANTHER | 1 | 949 | 949 | 5.8E-221 | – | |
| MobiDBLite | 49 | 70 | 22 | - | – | |
| MobiDBLite | 49 | 67 | 19 | - | – | |
| MobiDBLite | 119 | 164 | 46 | - | – | |
| MobiDBLite | 137 | 164 | 28 | - | – | |
| MobiDBLite | 193 | 223 | 31 | - | – | |
| MobiDBLite | 203 | 223 | 21 | - | – | |
| MobiDBLite | 296 | 318 | 23 | - | – | |
| SUPERFAMILY | 647 | 697 | 51 | 7.39E-7 | ||
| CDD | 651 | 695 | 45 | 3.30336E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0482700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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