Domain Predictions — View

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PTHR45623

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0048100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromodomain helicase-DNA-binding protein; TAIR: AT2G13370.1 chromatin remodeling 5; Swiss-Prot: sp\|F4IV99\|CHR5_ARATH Protein CHROMATIN REMODELING 5; TrEMBL-Plants: tr\|I1JIZ0\|I1JIZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0048100	Domains Coil G3DSA:1.10.10.60 G3DSA:2.40.50.40 G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR000953 IPR001650 IPR014001 IPR016197 IPR023780 IPR025260 IPR027417 IPR038718 PF00176 PF00271 PF00385 PF13907 PS50013 PS51192 PS51194 PTHR45623 PTHR45623:SF14 SM00298 SM00487 SM00490 SM01176 SSF52540 SSF54160 cd17993 cd18659 cd18660 cd18793 mobidb-lite	34
LotjaGi1g1v0048100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromodomain helicase-DNA-binding protein; TAIR: AT2G13370.1 chromatin remodeling 5; Swiss-Prot: sp\|F4IV99\|CHR5_ARATH Protein CHROMATIN REMODELING 5; TrEMBL-Plants: tr\|I1JIZ0\|I1JIZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0048100	Domains Coil G3DSA:1.10.10.60 G3DSA:2.40.50.40 G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR000953 IPR001650 IPR014001 IPR016197 IPR023780 IPR025260 IPR027417 IPR038718 PF00176 PF00271 PF00385 PF13907 PS50013 PS51192 PS51194 PTHR45623 PTHR45623:SF14 SM00298 SM00487 SM00490 SM01176 SSF52540 SSF54160 cd17993 cd18659 cd18660 cd18793 mobidb-lite	34
LotjaGi1g1v0378800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp\|Q9S775\|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr\|A0A151TT78\|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800	Domains Coil G3DSA:1.10.10.60 G3DSA:2.40.50.40 G3DSA:3.30.40.10 G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR000953 IPR001650 IPR001965 IPR009462 IPR009463 IPR013083 IPR014001 IPR016197 IPR019786 IPR019787 IPR023780 IPR027417 IPR038718 PF00176 PF00271 PF00385 PF00628 PF06461 PF06465 PS01359 PS50013 PS50016 PS51192 PS51194 PTHR45623 PTHR45623:SF25 SM00249 SM00298 SM00487 SM00490 SM01146 SM01147 SSF52540 SSF54160 cd17995 cd18659 cd18660 cd18793 mobidb-lite	46
LotjaGi1g1v0378800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.1 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp\|Q9S775\|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr\|A0A151TT78\|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800	Domains Coil G3DSA:1.10.10.60 G3DSA:2.40.50.40 G3DSA:3.30.40.10 G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR000953 IPR001650 IPR001965 IPR009462 IPR009463 IPR013083 IPR014001 IPR016197 IPR019786 IPR019787 IPR023780 IPR027417 IPR038718 PF00176 PF00271 PF00385 PF00628 PF06461 PF06465 PS01359 PS50013 PS50016 PS51192 PS51194 PTHR45623 PTHR45623:SF25 SM00249 SM00298 SM00487 SM00490 SM01146 SM01147 SSF52540 SSF54160 cd17995 cd18659 cd18660 cd18793 mobidb-lite	46
LotjaGi1g1v0378800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp\|Q9S775\|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr\|A0A151TT78\|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800	Domains Coil G3DSA:1.10.10.60 G3DSA:2.40.50.40 G3DSA:3.30.40.10 G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR000953 IPR001650 IPR001965 IPR009462 IPR009463 IPR013083 IPR014001 IPR016197 IPR019786 IPR019787 IPR023780 IPR027417 IPR038718 PF00176 PF00271 PF00385 PF00628 PF06461 PF06465 PS01359 PS50013 PS50016 PS51192 PS51194 PTHR45623 PTHR45623:SF25 SM00249 SM00298 SM00487 SM00490 SM01146 SM01147 SSF52540 SSF54160 cd17995 cd18659 cd18660 cd18793 mobidb-lite	46
LotjaGi1g1v0482700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromatin remodeling factor; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp\|F4KBP5\|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr\|Q2HV80\|Q2HV80_MEDTR Homeodomain-like; Found in the gene: LotjaGi1g1v0482700	Domains IPR009057 PTHR45623 PTHR45623:SF26 SSF46689 cd11660 mobidb-lite	6
LotjaGi1g1v0482700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromatin remodeling factor; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp\|F4KBP5\|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr\|Q2HV80\|Q2HV80_MEDTR Homeodomain-like; Found in the gene: LotjaGi1g1v0482700	Domains IPR009057 PTHR45623 PTHR45623:SF26 SSF46689 cd11660 mobidb-lite	6
LotjaGi1g1v0690100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromatin remodeling factor; TAIR: AT1G08060.1 ATP-dependent helicase family protein; Swiss-Prot: sp\|Q9M658\|MOM1_ARATH Helicase protein MOM1; TrEMBL-Plants: tr\|I1JPN1\|I1JPN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0690100	Domains Coil G3DSA:2.40.50.40 G3DSA:3.30.40.10 G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR000953 IPR001965 IPR013083 IPR016197 IPR019786 IPR019787 IPR023780 IPR027417 IPR038718 PF00176 PF00385 PS01359 PS50013 PS50016 PTHR45623 PTHR45623:SF13 SM00249 SM00298 SSF52540 SSF54160 cd17993 cd18659 cd18660 cd18793 mobidb-lite	31
LotjaGi1g1v0690100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromatin remodeling factor; TAIR: AT1G08060.1 ATP-dependent helicase family protein; Swiss-Prot: sp\|Q9M658\|MOM1_ARATH Helicase protein MOM1; TrEMBL-Plants: tr\|I1JPN1\|I1JPN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0690100	Domains Coil G3DSA:2.40.50.40 G3DSA:3.30.40.10 G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR000953 IPR001965 IPR013083 IPR016197 IPR019786 IPR019787 IPR023780 IPR027417 IPR038718 PF00176 PF00385 PS01359 PS50013 PS50016 PTHR45623 PTHR45623:SF13 SM00249 SM00298 SSF52540 SSF54160 cd17993 cd18659 cd18660 cd18793 mobidb-lite	31
LotjaGi3g1v0165600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Helicase MOM1; TAIR: AT1G08060.1 ATP-dependent helicase family protein; Swiss-Prot: sp\|Q9M658\|MOM1_ARATH Helicase protein MOM1; TrEMBL-Plants: tr\|A0A072VMM6\|A0A072VMM6_MEDTR Helicase MOM1; Found in the gene: LotjaGi3g1v0165600_LC	Domains Coil G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR001650 IPR027417 IPR038718 PF00271 PS51194 PTHR45623 PTHR45623:SF13 SSF52540 cd18793 mobidb-lite	13
LotjaGi4g1v0022000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromodomain-helicase-DNA-binding family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp\|F4KBP5\|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr\|K7KPZ4\|K7KPZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0022000	Domains G3DSA:1.10.10.60 G3DSA:1.20.920.10 G3DSA:2.40.50.40 G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR000953 IPR001650 IPR001965 IPR009463 IPR011011 IPR014001 IPR016197 IPR019786 IPR019787 IPR023780 IPR027417 IPR036427 IPR038718 PF00176 PF00271 PF00385 PF00628 PF06465 PS01359 PS50013 PS50016 PS51192 PS51194 PTHR45623 PTHR45623:SF28 SM00249 SM00298 SM00487 SM00490 SM01147 SSF52540 SSF54160 SSF57903 cd11660 cd15532 cd17995 cd18659 cd18660 cd18793 mobidb-lite	46

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	9.09