Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0492700 |
| Transcript ID | LotjaGi1g1v0492700.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cysteine protease; TAIR: AT2G44140.1 Peptidase family C54 protein; Swiss-Prot: sp|A2Q1V6|ATG4_MEDTR Cysteine protease ATG4; TrEMBL-Plants: tr|I3SYJ4|I3SYJ4_LOTJA Cysteine protease; Found in the gene: LotjaGi1g1v0492700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:100614508..100621635) extracted from Lotus japonicus Gifu genome v1.2.
ACACACATACACATTACCTAGAAGAAGGTTGAGAAAGAAACAAAGAAAGAGAGAAGAACAACTAGAGTCCGAACCAAGTC TCATAGCTGAGTTCAGGATCGGAATTCTCCCACCCTTCATCATCATCATCATCTCTCGATCCTCGTTCAGCTACGAAACA TTATCCTCGTACGCTTCGATTCTCCGCTGTTTAATTTTCCTTATTCTCTTCGAAACCCCTCTTTTTTAAAATTAAATAAA ATTCTATTTATTTTCAACGGAGATTCGTCGTTTTCTTCCCCGTAAACGATGTTTCCTATGCGTTGACAATTACTCAATCT GGGTCTCTCTCTGCGACTTCCCTTTTTGGATTTCGTTATCTTTCACTTTCTGCTTTCAAATTTGACAGTTCGTTCTGTTT GTTCATAGTCTTTCATGCTCTTGATGATGTAATTGATTTGGGGTTTCGATTTCATGTCTGCGTGATGCGTTTCTGTTATA TTTAAGATGGGTTTGTAGTAGATTTGGGGTGCTTGAATTTGCTTATATATTAAGAAAAAAAAAATTGATTTGGGGATTAA AGAAGCCTTGGCTATATGGGGTGCTTGGTGGAGGATACTTAAGGTTAATGTTCAATTATTAATTGATAGGAATACTAGTT GTTTTCTTGATGGGGAAAATGTTTTGAACTTCTACAGATACCCCATGTTTTTTTCACAAAAAATAATGGTATGAAGGATT TCTTTGTTCCAGTGGAATTAGGATTCTCTTATATCACTTGACAATGTCAAGTGAAACATTGTGTCTCTCTTTCTCTTCAT ATATATTCAAGGGTCCTGTCTATTTAATACATATGAAGAGAGAGATAGACGCAATTCCAACATGAGGAGGTTTCCACTTG AGAGGATCCTGATCCACTACTAGTGAGGGCGCTATAAAATTGTCTTCTAGGTGATTGCGTCATACAGTGTTATCGAATAG CGGCGTACCGGATTTTAGGCTAATCGCGATGCCGCTATTGCCATTATAGCGCACTATTCGTCGCTAAATAGCGGATTTTT GGCTCACCCCGATGGTCCGCGATCAAGATTTGACAACACTGGCATCATAGGATATTTTTATCCTATTTGGGCTTAGGGCA AGGTGGATTACTACCTGAAGAGTTGGGGGGGGGGGGGTTGAATCTGTGCACTTGCAGAGAATATGTTTGCTTATGGAAAA CTACTTGTTTTCTGTTCTCAGATGATTAATGAGAAATAATGAACTTGTATATTTTGGAGGTTTTTTATGTCGTTGTTTCA TTATTCACCTCTTTACTTGCAGATATTGGCACAATCTTGGTCTGCTTCTATGAGACAGATCTTGTGTTTTCTGCGGCTGC ATAATGGTATTGAAGGCTTTCTGTGATAGGATTGTTGCTGCAAAATGTTCTTCTAAAAGCTCAACTGAAACTGTAGATAA CTCTCAGGTGCCTGCTTGTTCGAAAGCAGGGTCTAGTGATAGTAAGTTTCCCAAGGCTTCCTTATGGTCAAGCTTCTTTA CATCTGGTTTTTCAGTCATTGAAACATATAGTAAATCACCAGCTTCTGAAAAGAAAGCAGTTCATTCTCAAAATAGTGGT TGGGCTGCTGCTGTGAGGAAAGTTGTTACTGCTGGCTCAATGAGGAGATTCCAAGAGCGTGTACTTGGGTCAAGCAGAAC TGACGTTTCAAGCTCTGATGGTGATATATGGCTTTTAGGTGTCTGCCATAAATTTTCGCAGCAGGAATCAACTGGAGATG TAGATAATAGTATTGTATTTGCAGCATTTGAGCAAGATTTTTCCTCAAAAATCCTATTAACGTATCGGAAAGGTCTGTTG TGTGTATCCTACCTTTTTTGGGATGCATTCAAATGATAGATTTTAGAATAACAAATTTTAGTATGCATACTCTATAGGTT TTGATGCTATTGGAGATTCAAAGTATACTAGCGATGTCAATTGGGGTTGTATGCTTCGAAGCAGTCAGATGCTTGTTGCT CAGGTAATATGCCTTTTCTGTAATGATTGCTTTTGACGTAGGTATTGTCATGCGGTTCCTTCTAATAACATGTGTTATTT TTTGCCTTTCTCTTTTGTGTTTATTTCAAAATAAATCTACTAAAATGGCTTCCTCGTTTCACTGTTCAGGCATTACTTTT TCATAAATTAGGTAGAATGTGGAGGAAAACTACTGACAAGGTCAGGTGATTGATATGCAATGCGGGTTATTTGCTGTTGC CCTTTTTCTCTACCTTTGTTCCTTATATGTTGACATCTATATGTTTTTCTGTCTTAAGATATAAGGCCGTTAGGTTGACT CACTATTGTGCTTTCATGATACAGCCACTTGACAAAGAATATCTTGACATCTTGCAACATTTTGGTGATTCGGAGGCTTC GTCTTTTTCTATCCACAATCTTCTTCAAGCTGGGAAAGGTTATGGCCTTGCTGTTGGGTCATGGGTGGGACCATATGCCA TGTGTCGCTCATGGGAAGTTCTAGCTCGTAACCAGAGGGAGACAAATGACCATGGAGAACAGCCACTTCCAATGGCTCTT TATGTTGTTTCTGGAGATGAAGATGGGGAGCGTGGTGGAGCACCAGTTGTCTGCATTGAAGATGCCTCCAGACGGTGTTC CGAGTTTTCAAGGGGTCTAGCTGCTTGGACACCTCTACTTTTACTGGTACCTTTGGTTCTTGGACTTGATAAAGTCAATC TAAGGTGTGTAACATTTTCAAGGTTCTATGGTATTATATAATTTATTCACGTTTCAACTTTCAACCTATTAGTATTTTAG GTTTATTTAAATAGAGAAGTTCCCTGCTATTTGGATTCTTTTATGAATAATACTAGTAACAATCCATTTTAAAGTGTCCA TTATATTAATTTCTAAATAAAAAAAGCCAATATAAAACAGAGTCAGGTTTAGTGTATGTTGAAATTTTAAAGTTTTTTTT TTACAGCCGTTTTGTTATACTTTCAGTTGCACCTGTTATGAATGTTGAATCACAGTGATAGAGACTCCGCAGTGGATAAA AACTGTATGTTGTAATTATCCATCCAAGGTATACAGAAGTGCGCTTCGAAGCGCTAAAGCGCGCTTGAGGTGGCGCTGTG CTTTGAAGCGGCACTAAGGCGAAAATCAGCGGAAGCGTTGAGAAAGCGCAGAAGCGTGATTTTGAAGCTTCTGCCGCTTC AGCCAGATTCGCTTGTTTCCGGATTTTTTGGACCCGTTTTGCTAAAATTAGGGGTTTTAAACCTAATTTTCAATTGTTCC TCTTCTATCTTGAGGCTCTCTCTCTCACCCGTTGAAACTGCTGCATCTCTCTCGCGATTCTGTGTTACTCTTCGCCGTCT CTCTCGCCGTCTGCACAGCCGCCGCCGCCGGCTACTTGCAATTTGCAAGTTTGTTCCTCTTCGACCCTGTCTCTCTCTCT CTCTGTTATTCCAAACTTCTGTTGTTCATCAAATCTTCTTCTATTTCTTCCTTCGACTTTGTCTCTCTGTTCTGTTGTTC GAAAATTTAAGAGCACCTCTCTGTTCTCTCACTTGTTCGAATGGGTTATAATGTTACTCTGTTCTCTCAGTTAAGAGCAA TAGTTTCGTCACATTGTAAAATAGCTATAATATTACTCTGTTCTCTCACTGTTCGAATGGGTTATATAGTGTCTTATAGC TTATTTATGACTTATGTATGAATGATCAATTATGAGTTATGGTGTTTTGTGTTTTATGTATGATATTCTTAAGACATATG CATATAAATATTTGTAAGTATAAATATATATATAACTGGCAAAAGCGGCTAAAGCCTACGCTTTAGCTAGCGCTTTACGC TTTTGGACCCTCCACGCTTTATTGCTAAATCCCGCTTCTGACTACCTTGTATCCATCATATACTTGTAAAATACCATCTC TTTGGTTCAAATTTGAAGCGTACCTGTATAGTAGCGTAACATCACAATTGGTTTGAAAATATTTGTCTAATGAGTTAGTA CGCGGTAGAGGTGATAATTAGGTGTAATAGGTCATGTTATCCATATTCATAGGTGATTGGTACATCAAGTTTTTTTAAAA ATAATTTAAATTTGTTGGTCATTTCCACAGTAATGCAACCACTGATTAGTTGTATCTGTAAACTATTATCAGGTATATTC CTTTATTGCAGTCAACTTTTAAATTTCCCCAGAGCCTTGGCATCTTGGGTGGCAAACCAGGTGCTTCAACATACATAATT GGTGTTCAGAATGAAAAGGCATTCTACCTTGATCCACATGATGTTCAGCCGGTATGTCAGTATTGACAAAGTTATTGCTT CTTACTTCCCTTATTATATATAATTGAAATTGCAAAACTTGTAGTCATGCGTTATATATTAATTACCATATTGAATGAAA AATTTATAGGCACGCTATACCCCATCTTGATTTAATGGTGTTTTTACAATTTTACTTGACAAGTCATCAACTAGTCTATG AAGTTTTGCTTTCAGAGGAAACAAAAAAGTTAAAATAGAAAAACCAAGAAACTGGTCTTGTTCTGTTTTCAAAAAGTGCA TGTCATTGAAACATGGTTTGGTAAATATTTAATAGATTTTATTGATGAAATCAGGACAAGTTTTTATTCAGAATCATTCA GGATTGTTTGCTGAGATAGCAGTTATGTGGTATTAATTCTCTGAATCTTTATATATACGACCAACCAGCTATGCTAAATC GAAAATAATCAACAACTTGCTAAGTATTTCTCCTAACAAGTGAAACTGGATTACAAAAATCTTACATTCTGGCTTTGTTG TGGCAAAGCACAATGATTCAGGAATGGAATGATTTCCACTGATCTCTTGTACTTGTTATGTACTCAAGGTAGCAAGAGTT CACATTATTTAGGCATGAAACATTGTGAATCTTCTTACATTTTAGCTGAATAACATGTTTCTGGGAACCTATGTCACTTG GGTTTGATTTTGAAAAGATGTATGTCTGGAGGAATAAGAGGTGTGATGCACCTGAACATACCCCTGAGTGATTGTAACTA CCAGCTGAGGTGGCAGGGGCGTAGAACCATTTGGGTAGAGCTGAAGAGAGAAATAAGGCTGTTATATTCCTTGGGCTTAG GCTGGGAGTGATAGAGGCACTCTCTAATTGCCTCCATTGTTGCTTCTGTTCATTTCTTACTACTGTATACACTCCATTCG AGACTCCTTTTCATTTGGTGTTGCTCTTACTTGGACACAGTTTTTTCTTCCAAGTACTAGTGTAATTTTTCTGGTACAAC ATTTGGTATCAGAGCCTTCCACTATGTCTCTCGGCTGCAAATGAGTGGCGCAGGTGGTGACGCCCAGCATTGTAGTGTTT GCTAGGACTCGTCAAAGGGCTAGTTCACAGCCAGCCCATCTGGGCGCCGGGGCTGCGGAGCGTGGTGGAATGTTAGGACC CAATTGCAAGGTATGGGACTTGAGTCCCACATTGGCAGTATGAGATTCTAATGTCGGGTTTATAAGACCTTAGGCTCTCA ACTACAACAGTTATCTTAAGTTCTTATTAAACATATTCAAATTGCTATATTTCTTCAAAACTCCGGGTACATATGCATTT GGGGATCCACAGAGCTTGTGATGATTTCTGCTATATAGATGAAAAAACTAAAATATAAGGCTAGGTGCATTTGGGTAAAC AACTTAATTAAGTGTTTATGGAAATGAGCGTTTATTCAAAAACTAATTTGAGAAACTTATTGAAATAACCTCAAAAAGGT TCTAGGTATAAGAACTTATTCATAAGATAATCTGTGCAACTTATAAAATAAGCTCAAAATAATAGATCGGATATAAGCTA TTTACGTAAGCTCTCCCGAACAATTGCACAAATGCCTATGTTATAAGATAAGCTTAAATAAGCTCTTCCAAACAGGATCA TATATATTTTAAAAAGAACTGCCCATAGTAAAGGGAAAAGGCAAAGAGAAGGAAAAAAAAAGGAACAACTGGAAAAATGA AGAACAAAAAGGAAATCTCAATGATGAACTAGGTTTCCTTGCTGTTTATGCATAATTTCAATCATAGTGTTTAGGTTGCT GTTGGTTGGTGAAGCATTCATACTTAGAACGTCTTAAATGGGTTTCAGGTTGTTCATATCAATGGGGACGCCCAAGATCC TAATACTTCATCATACCATTGCAAGTAGGTTTTCCTATTGGCTTTCTTTTATATATTTGTTGTTAACCATAATTTGTTTA TCTAACATTTAAAATTCTAACAGCATTGTCAGGCAAATGCCCCTAGATTCAATTGACCCGTCCTTGGCCATTGGATTTTA CTGCCGAGACAAAGGTTTGCTGGTTTACTTTGGTTTAATGTGTTCAATAATTGTAGCTGATATCTAAGCTTTGTCTTGAC CATCATCACCTTGTCTATGGTGGCTGCCAGATGATTTTGACGATTTCTGTTCGCGTGCTTCCAAGCTTGCGGAAGAATCA AACGGTGCACCATTATTCACTGTAGCACAGTCTAGGAGTTTCCCATTTCAAGACGCTGGTTACGATGTGTCAGGTGACAA CACTGGATTTCAAGAGGATGATTCCCATGGAGTGGATCTACTCAATGATGCAGGAACCAATGAGGATGATTGGCAACTAC TATAATTTCCAAGCTATAGACATGGATTTGAAGTACTTGGTTCTAATGAGCCTAATTGCTATTTGATGCTTGACTTGGGT CTTCCATTCTTCCAACATTGTTAAATAGGGCTTGTAGAAAGTAATTTGAACACTCATCATGATTCTTTGGCTTAAATCAT TTGCTCATTTGTTCATATATATAGCTAACCAGTTATTTGTTGTACATTCATACTAGTTGGTTCATATTTGTTGCCTGTAC CCTTTTGTTGGCTACAGACTTGTAGTTGATAATACTTTCGAAGTGTCAAATAAGTGGTGGAAAATAATTCATATTGAGAT GGAATGTTTCCTTTAAGATAAAAGGATAGCACAAACGAAACACTTGACTCATTTAAGATTAAATAAAAAGTCTGATATGT TGAACATTGCGATGCTGATATATTGGCGAGGTCATGTGGATGGCATGTCAATACTGCTATTATTTTCATGTGTTCTTCTT TGGATATT
CDS sequence (LotjaGi1g1v0492700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTATTGAAGGCTTTCTGTGATAGGATTGTTGCTGCAAAATGTTCTTCTAAAAGCTCAACTGAAACTGTAGATAACTC TCAGGTGCCTGCTTGTTCGAAAGCAGGGTCTAGTGATACTTCTGAAAAGAAAGCAGTTCATTCTCAAAATAGTGGTTGGG CTGCTGCTGTGAGGAAAGTTGTTACTGCTGGCTCAATGAGGAGATTCCAAGAGCGTGTACTTGGGTCAAGCAGAACTGAC GTTTCAAGCTCTGATGGTGATATATGGCTTTTAGGTGTCTGCCATAAATTTTCGCAGCAGGAATCAACTGGAGATGTAGA TAATAGTATTGTATTTGCAGCATTTGAGCAAGATTTTTCCTCAAAAATCCTATTAACGTATCGGAAAGGTTTTGATGCTA TTGGAGATTCAAAGTATACTAGCGATGTCAATTGGGGTTGTATGCTTCGAAGCAGTCAGATGCTTGTTGCTCAGGCATTA CTTTTTCATAAATTAGGTAGAATGTGGAGGAAAACTACTGACAAGCCACTTGACAAAGAATATCTTGACATCTTGCAACA TTTTGGTGATTCGGAGGCTTCGTCTTTTTCTATCCACAATCTTCTTCAAGCTGGGAAAGGTTATGGCCTTGCTGTTGGGT CATGGGTGGGACCATATGCCATGTGTCGCTCATGGGAAGTTCTAGCTCGTAACCAGAGGGAGACAAATGACCATGGAGAA CAGCCACTTCCAATGGCTCTTTATGTTGTTTCTGGAGATGAAGATGGGGAGCGTGGTGGAGCACCAGTTGTCTGCATTGA AGATGCCTCCAGACGGTGTTCCGAGTTTTCAAGGGGTCTAGCTGCTTGGACACCTCTACTTTTACTGGTACCTTTGGTTC TTGGACTTGATAAAGTCAATCTAAGGTATATTCCTTTATTGCAGTCAACTTTTAAATTTCCCCAGAGCCTTGGCATCTTG GGTGGCAAACCAGGTGCTTCAACATACATAATTGGTGTTCAGAATGAAAAGGCATTCTACCTTGATCCACATGATGTTCA GCCGGTTGTTCATATCAATGGGGACGCCCAAGATCCTAATACTTCATCATACCATTGCAACATTGTCAGGCAAATGCCCC TAGATTCAATTGACCCGTCCTTGGCCATTGGATTTTACTGCCGAGACAAAGATGATTTTGACGATTTCTGTTCGCGTGCT TCCAAGCTTGCGGAAGAATCAAACGGTGCACCATTATTCACTGTAGCACAGTCTAGGAGTTTCCCATTTCAAGACGCTGG TTACGATGTGTCAGGTGACAACACTGGATTTCAAGAGGATGATTCCCATGGAGTGGATCTACTCAATGATGCAGGAACCA ATGAGGATGATTGGCAACTACTATAA
Protein sequence (LotjaGi1g1v0492700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLKAFCDRIVAAKCSSKSSTETVDNSQVPACSKAGSSDTSEKKAVHSQNSGWAAAVRKVVTAGSMRRFQERVLGSSRTD VSSSDGDIWLLGVCHKFSQQESTGDVDNSIVFAAFEQDFSSKILLTYRKGFDAIGDSKYTSDVNWGCMLRSSQMLVAQAL LFHKLGRMWRKTTDKPLDKEYLDILQHFGDSEASSFSIHNLLQAGKGYGLAVGSWVGPYAMCRSWEVLARNQRETNDHGE QPLPMALYVVSGDEDGERGGAPVVCIEDASRRCSEFSRGLAAWTPLLLLVPLVLGLDKVNLRYIPLLQSTFKFPQSLGIL GGKPGASTYIIGVQNEKAFYLDPHDVQPVVHINGDAQDPNTSSYHCNIVRQMPLDSIDPSLAIGFYCRDKDDFDDFCSRA SKLAEESNGAPLFTVAQSRSFPFQDAGYDVSGDNTGFQEDDSHGVDLLNDAGTNEDDWQLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 279 | 279 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 18 | 18 | - | – | |
| PANTHER | 4 | 461 | 458 | 2.5E-177 | ||
| PANTHER | 4 | 461 | 458 | 2.5E-177 | – | |
| MobiDBLite | 22 | 44 | 23 | - | – | |
| SUPERFAMILY | 73 | 417 | 345 | 1.81E-97 | ||
| Pfam | 114 | 399 | 286 | 5.9E-88 | ||
| Phobius | 280 | 296 | 17 | - | – | |
| Phobius | 297 | 461 | 165 | - | – | |
| MobiDBLite | 430 | 449 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0492700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…