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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 250 results. Now displaying 1 of 5 with 50 rows per page. This search has taken 5.683s to perform.
Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
---|---|---|---|---|---|---|---|---|
n.a. | Ubiquitin thioesterase OTU1; TAIR: AT1G50670.1 OTU-like cysteine protease family protein; Swiss-Prot: sp|Q567B1|OTU1_DANRE Ubiquitin thioesterase OTU1; TrEMBL-Plants: tr|I3T4E6|I3T4E6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0029400 | LjG1.1_chr1 | 3521936 | 3527212 | + | – | ||
n.a. | Ubiquitin thioesterase OTU1; TAIR: AT1G50670.1 OTU-like cysteine protease family protein; Swiss-Prot: sp|Q567B1|OTU1_DANRE Ubiquitin thioesterase OTU1; TrEMBL-Plants: tr|I3T4E6|I3T4E6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0029400 | LjG1.1_chr1 | 3521994 | 3526990 | + | – | ||
n.a. | Ubiquitin thioesterase OTU1; TAIR: AT1G50670.1 OTU-like cysteine protease family protein; Swiss-Prot: sp|Q55BI3|OTU1_DICDI Ubiquitin thioesterase OTU1; TrEMBL-Plants: tr|I3T4E6|I3T4E6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0029400 | LjG1.1_chr1 | 3522576 | 3525472 | + | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | LjG1.1_chr1 | 8563607 | 8579364 | + | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | LjG1.1_chr1 | 8564188 | 8578405 | + | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | LjG1.1_chr1 | 8564191 | 8578405 | + | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | LjG1.1_chr1 | 8564191 | 8578405 | + | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT3G11910.1 ubiquitin-specific protease 13; Swiss-Prot: sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | LjG1.1_chr1 | 8564636 | 8578405 | + | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT3G11910.1 ubiquitin-specific protease 13; Swiss-Prot: sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | LjG1.1_chr1 | 8564697 | 8578405 | + | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 | LjG1.1_chr1 | 8564765 | 8578405 | + | – | ||
n.a. | Ulp1 protease family, carboxy-terminal domain protein; TAIR: AT1G10570.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C; TrEMBL-Plants: tr|G7K006|G7K006_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0080100_LC | LjG1.1_chr1 | 11564191 | 11565786 | - | – | ||
n.a. | Sentrin-specific protease; TAIR: AT1G09730.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B; TrEMBL-Plants: tr|A0A0B2PKY4|A0A0B2PKY4_GLYSO Putative ubiquitin-like-specific protease 2B; Found in the gene: LotjaGi1g1v0137200 | LjG1.1_chr1 | 22396208 | 22410231 | - | – | ||
n.a. | Sentrin-specific protease; TAIR: AT1G09730.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B; TrEMBL-Plants: tr|A0A0B2PKY4|A0A0B2PKY4_GLYSO Putative ubiquitin-like-specific protease 2B; Found in the gene: LotjaGi1g1v0137200 | LjG1.1_chr1 | 22398354 | 22410158 | - | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase family protein; TAIR: AT4G24560.1 ubiquitin-specific protease 16; Swiss-Prot: sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16; TrEMBL-Plants: tr|I1JGZ3|I1JGZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0138100 | LjG1.1_chr1 | 22527234 | 22534986 | - | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT3G47890.1 Ubiquitin carboxyl-terminal hydrolase-related protein; Swiss-Prot: sp|Q8BL06|UBP54_MOUSE Inactive ubiquitin carboxyl-terminal hydrolase 54; TrEMBL-Plants: tr|A0A1J7HY86|A0A1J7HY86_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0187900 | LjG1.1_chr1 | 36783019 | 36799823 | - | – | ||
n.a. | Cysteine proteinase; TAIR: AT5G50260.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P25803|CYSEP_PHAVU Vignain; TrEMBL-Plants: tr|I1KC88|I1KC88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0230500 | LjG1.1_chr1 | 53964568 | 53970290 | + | – | ||
n.a. | Ufm1-specific protease 2; TAIR: AT3G48380.1 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2; Swiss-Prot: sp|Q9STL8|UFSP_ARATH Probable Ufm1-specific protease; TrEMBL-Plants: tr|V7B0G2|V7B0G2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0230900 | LjG1.1_chr1 | 54127101 | 54133459 | + | – | ||
n.a. | Sentrin-specific protease; TAIR: AT3G48480.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A; TrEMBL-Plants: tr|I3SBV8|I3SBV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0235300 | LjG1.1_chr1 | 55558865 | 55562446 | - | – | ||
n.a. | Sentrin-specific protease; TAIR: AT1G09730.2 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B; TrEMBL-Plants: tr|A0A151TSM7|A0A151TSM7_CAJCA Ubiquitin-like-specific protease 2; Found in the gene: LotjaGi1g1v0347400 | LjG1.1_chr1 | 81558913 | 81570673 | + | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase family protein; TAIR: AT4G24560.1 ubiquitin-specific protease 16; Swiss-Prot: sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16; TrEMBL-Plants: tr|A0A0B2PIM3|A0A0B2PIM3_GLYSO Ubiquitin carboxyl-terminal hydrolase 16; Found in the gene: LotjaGi1g1v0347900 | LjG1.1_chr1 | 81613488 | 81622052 | - | – | ||
n.a. | Cysteine proteinase; TAIR: AT5G43060.1 Granulin repeat cysteine protease family protein; Swiss-Prot: sp|Q9FMH8|RD21B_ARATH Probable cysteine protease RD21B; TrEMBL-Plants: tr|I1M8Q5|I1M8Q5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0357600 | LjG1.1_chr1 | 83144114 | 83147077 | + | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase family protein; TAIR: AT2G24640.1 ubiquitin-specific protease 19; Swiss-Prot: sp|Q9SJA1|UBP19_ARATH Ubiquitin carboxyl-terminal hydrolase 19; TrEMBL-Plants: tr|A0A151TTH4|A0A151TTH4_CAJCA Ubiquitin carboxyl-terminal hydrolase 19; Found in the gene: LotjaGi1g1v0373600 | LjG1.1_chr1 | 85189088 | 85195362 | - | – | ||
n.a. | Cysteine protease family protein; TAIR: AT1G29090.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P04989|CYSP2_DICDI Cysteine proteinase 2; TrEMBL-Plants: tr|I3RZU2|I3RZU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0408800_LC | LjG1.1_chr1 | 89867897 | 89869228 | - | – | ||
n.a. | Cysteine protease; TAIR: AT5G60360.1 aleurain-like protease; Swiss-Prot: sp|Q8H166|ALEU_ARATH Thiol protease aleurain; TrEMBL-Plants: tr|I3RZU2|I3RZU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0408900_LC | LjG1.1_chr1 | 89871506 | 89873762 | + | – | ||
n.a. | Cysteine protease family protein; TAIR: AT1G09850.1 xylem bark cysteine peptidase 3; Swiss-Prot: sp|P14080|PAPA2_CARPA Chymopapain; TrEMBL-Plants: tr|I3RZU2|I3RZU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0411500_LC | LjG1.1_chr1 | 90210974 | 90216082 | - | – | ||
n.a. | Cysteine proteinase; TAIR: AT4G35350.1 xylem cysteine peptidase 1; Swiss-Prot: sp|O65493|XCP1_ARATH Cysteine protease XCP1; TrEMBL-Plants: tr|G8A0A3|G8A0A3_MEDTR Papain family cysteine protease; Found in the gene: LotjaGi1g1v0411800 | LjG1.1_chr1 | 90287365 | 90296376 | - | – | ||
n.a. | Cysteine protease, putative; TAIR: AT1G09850.1 xylem bark cysteine peptidase 3; Swiss-Prot: sp|P14080|PAPA2_CARPA Chymopapain; TrEMBL-Plants: tr|I3RZU2|I3RZU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0412200_LC | LjG1.1_chr1 | 90309651 | 90312793 | - | – | ||
n.a. | Cysteine protease, putative; TAIR: AT1G09850.1 xylem bark cysteine peptidase 3; Swiss-Prot: sp|P14080|PAPA2_CARPA Chymopapain; TrEMBL-Plants: tr|I3RZU2|I3RZU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0412200_LC | LjG1.1_chr1 | 90309653 | 90312777 | - | – | ||
n.a. | Cysteine protease; TAIR: AT4G23520.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|F4JNL3|RDL6_ARATH Probable cysteine protease RDL6; TrEMBL-Plants: tr|A0A0E0MEC8|A0A0E0MEC8_ORYPU Uncharacterized protein; Found in the gene: LotjaGi1g1v0420600_LC | LjG1.1_chr1 | 91431736 | 91432661 | - | – | ||
n.a. | Cysteine protease family protein; TAIR: AT1G09850.1 xylem bark cysteine peptidase 3; Swiss-Prot: sp|Q9LT78|RD21C_ARATH Probable cysteine protease RD21C; TrEMBL-Plants: tr|A0A1J7IIQ9|A0A1J7IIQ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0423400 | LjG1.1_chr1 | 91757413 | 91763963 | - | – | ||
n.a. | Cysteine proteinase; TAIR: AT4G39090.1 Papain family cysteine protease; Swiss-Prot: sp|P25804|CYSP_PEA Cysteine proteinase 15A; TrEMBL-Plants: tr|A0A151RQM7|A0A151RQM7_CAJCA Cysteine proteinase RD19a; Found in the gene: LotjaGi1g1v0424400 | LjG1.1_chr1 | 91892437 | 91895727 | + | – | ||
n.a. | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT4G15880.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P59110|SENP1_MOUSE Sentrin-specific protease 1; TrEMBL-Plants: tr|G7KP14|G7KP14_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0474800_LC | LjG1.1_chr1 | 98528171 | 98531518 | + | – | ||
n.a. | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT4G15880.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P59110|SENP1_MOUSE Sentrin-specific protease 1; TrEMBL-Plants: tr|G7KP14|G7KP14_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0474800_LC | LjG1.1_chr1 | 98528172 | 98531551 | + | – | ||
n.a. | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT4G15880.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P59110|SENP1_MOUSE Sentrin-specific protease 1; TrEMBL-Plants: tr|G7KP14|G7KP14_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0474800_LC | LjG1.1_chr1 | 98529276 | 98531539 | + | – | ||
n.a. | Cysteine protease; TAIR: AT2G44140.1 Peptidase family C54 protein; Swiss-Prot: sp|A2Q1V6|ATG4_MEDTR Cysteine protease ATG4; TrEMBL-Plants: tr|I3SYJ4|I3SYJ4_LOTJA Cysteine protease; Found in the gene: LotjaGi1g1v0492700 | LjG1.1_chr1 | 100614215 | 100621728 | - | – | ||
n.a. | Cysteine protease; TAIR: AT2G44140.1 Peptidase family C54 protein; Swiss-Prot: sp|A2Q1V6|ATG4_MEDTR Cysteine protease ATG4; TrEMBL-Plants: tr|I3SYJ4|I3SYJ4_LOTJA Cysteine protease; Found in the gene: LotjaGi1g1v0492700 | LjG1.1_chr1 | 100614508 | 100621635 | - | – | ||
n.a. | Cysteine protease; TAIR: AT2G44140.1 Peptidase family C54 protein; Swiss-Prot: sp|A2Q1V6|ATG4_MEDTR Cysteine protease ATG4; TrEMBL-Plants: tr|I3SYJ4|I3SYJ4_LOTJA Cysteine protease; Found in the gene: LotjaGi1g1v0492700 | LjG1.1_chr1 | 100614991 | 100620272 | - | – | ||
n.a. | Cysteine protease; TAIR: AT2G44140.1 Peptidase family C54 protein; Swiss-Prot: sp|A2Q1V6|ATG4_MEDTR Cysteine protease ATG4; TrEMBL-Plants: tr|I3SYJ4|I3SYJ4_LOTJA Cysteine protease; Found in the gene: LotjaGi1g1v0492700 | LjG1.1_chr1 | 100614991 | 100620272 | - | – | ||
n.a. | Ulp1 protease family, carboxy-terminal domain protein; TAIR: AT2G07240.1 cysteine-type peptidase; Swiss-Prot: sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1; TrEMBL-Plants: tr|A0A072U4K6|A0A072U4K6_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0498800_LC | LjG1.1_chr1 | 101477418 | 101477910 | - | – | ||
n.a. | Sentrin-specific protease; TAIR: AT3G06910.1 UB-like protease 1A; Swiss-Prot: sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A; TrEMBL-Plants: tr|A0A072U4K6|A0A072U4K6_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0499000_LC | LjG1.1_chr1 | 101488960 | 101489714 | - | – | ||
n.a. | Cysteine proteinase; TAIR: AT4G35350.1 xylem cysteine peptidase 1; Swiss-Prot: sp|O65493|XCP1_ARATH Cysteine protease XCP1; TrEMBL-Plants: tr|I1K796|I1K796_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0569300 | LjG1.1_chr1 | 110228376 | 110230421 | + | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT2G40930.1 ubiquitin-specific protease 5; Swiss-Prot: sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5; TrEMBL-Plants: tr|A0A151TAP6|A0A151TAP6_CAJCA Ubiquitin carboxyl-terminal hydrolase 5; Found in the gene: LotjaGi1g1v0657900 | LjG1.1_chr1 | 121845329 | 121856576 | - | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT2G40930.1 ubiquitin-specific protease 5; Swiss-Prot: sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5; TrEMBL-Plants: tr|A0A151TAP6|A0A151TAP6_CAJCA Ubiquitin carboxyl-terminal hydrolase 5; Found in the gene: LotjaGi1g1v0657900 | LjG1.1_chr1 | 121846294 | 121856340 | - | – | ||
n.a. | Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT2G40930.1 ubiquitin-specific protease 5; Swiss-Prot: sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5; TrEMBL-Plants: tr|A0A151TAP6|A0A151TAP6_CAJCA Ubiquitin carboxyl-terminal hydrolase 5; Found in the gene: LotjaGi1g1v0657900 | LjG1.1_chr1 | 121846294 | 121856361 | - | – | ||
n.a. | Ulp1 protease family, carboxy-terminal domain protein; TAIR: AT4G18960.1 K-box region and MADS-box transcription factor family protein; Swiss-Prot: sp|A1UER2|SYP_MYCSK Proline--tRNA ligase; TrEMBL-Plants: tr|G7K006|G7K006_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0687200 | LjG1.1_chr1 | 125438713 | 125443803 | - | – | ||
n.a. | Ulp1 protease family, carboxy-terminal domain protein; TAIR: AT4G18960.1 K-box region and MADS-box transcription factor family protein; Swiss-Prot: sp|A1UER2|SYP_MYCSK Proline--tRNA ligase; TrEMBL-Plants: tr|G7K006|G7K006_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0687200 | LjG1.1_chr1 | 125438799 | 125443585 | - | – | ||
n.a. | Phytochelatin synthase; TAIR: AT5G44070.1 phytochelatin synthase 1 (PCS1); Swiss-Prot: sp|Q2QKL5|PCS3_LOTJA Glutathione gamma-glutamylcysteinyltransferase 3; TrEMBL-Plants: tr|I3S9J9|I3S9J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0706800 | LjG1.1_chr1 | 127525086 | 127530006 | - | – | ||
n.a. | Phytochelatin synthase; TAIR: AT5G44070.1 phytochelatin synthase 1 (PCS1); Swiss-Prot: sp|Q2QKL5|PCS3_LOTJA Glutathione gamma-glutamylcysteinyltransferase 3; TrEMBL-Plants: tr|I3S9J9|I3S9J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0706800 | LjG1.1_chr1 | 127525086 | 127536443 | - | – | ||
n.a. | Phytochelatin synthase; TAIR: AT5G44070.1 phytochelatin synthase 1 (PCS1); Swiss-Prot: sp|Q2QKL5|PCS3_LOTJA Glutathione gamma-glutamylcysteinyltransferase 3; TrEMBL-Plants: tr|I3S9J9|I3S9J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0706800 | LjG1.1_chr1 | 127525344 | 127536416 | - | – | ||
n.a. | Phytochelatin synthase; TAIR: AT5G44070.1 phytochelatin synthase 1 (PCS1); Swiss-Prot: sp|Q2TE74|PCS2_LOTJA Glutathione gamma-glutamylcysteinyltransferase 2; TrEMBL-Plants: tr|I3S9J9|I3S9J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0706800 | LjG1.1_chr1 | 127531967 | 127536443 | - | – |