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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR038765
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We have found 250 results. Now displaying 1 of 5 with 50 rows per page. This search has taken 5.683s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Ubiquitin thioesterase OTU1; TAIR: AT1G50670.1 OTU-like cysteine protease family protein; Swiss-Prot: sp|Q567B1|OTU1_DANRE Ubiquitin thioesterase OTU1; TrEMBL-Plants: tr|I3T4E6|I3T4E6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0029400 LjG1.1_chr1 3521936 3527212 +
n.a. Ubiquitin thioesterase OTU1; TAIR: AT1G50670.1 OTU-like cysteine protease family protein; Swiss-Prot: sp|Q567B1|OTU1_DANRE Ubiquitin thioesterase OTU1; TrEMBL-Plants: tr|I3T4E6|I3T4E6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0029400 LjG1.1_chr1 3521994 3526990 +
n.a. Ubiquitin thioesterase OTU1; TAIR: AT1G50670.1 OTU-like cysteine protease family protein; Swiss-Prot: sp|Q55BI3|OTU1_DICDI Ubiquitin thioesterase OTU1; TrEMBL-Plants: tr|I3T4E6|I3T4E6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0029400 LjG1.1_chr1 3522576 3525472 +
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 LjG1.1_chr1 8563607 8579364 +
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 LjG1.1_chr1 8564188 8578405 +
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 LjG1.1_chr1 8564191 8578405 +
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 LjG1.1_chr1 8564191 8578405 +
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT3G11910.1 ubiquitin-specific protease 13; Swiss-Prot: sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 LjG1.1_chr1 8564636 8578405 +
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT3G11910.1 ubiquitin-specific protease 13; Swiss-Prot: sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 LjG1.1_chr1 8564697 8578405 +
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT5G06600.1 ubiquitin-specific protease 12; Swiss-Prot: sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12; TrEMBL-Plants: tr|B0BLB2|B0BLB2_LOTJA CM0545.290.nc protein; Found in the gene: LotjaGi1g1v0061200 LjG1.1_chr1 8564765 8578405 +
n.a. Ulp1 protease family, carboxy-terminal domain protein; TAIR: AT1G10570.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C; TrEMBL-Plants: tr|G7K006|G7K006_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0080100_LC LjG1.1_chr1 11564191 11565786 -
n.a. Sentrin-specific protease; TAIR: AT1G09730.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B; TrEMBL-Plants: tr|A0A0B2PKY4|A0A0B2PKY4_GLYSO Putative ubiquitin-like-specific protease 2B; Found in the gene: LotjaGi1g1v0137200 LjG1.1_chr1 22396208 22410231 -
n.a. Sentrin-specific protease; TAIR: AT1G09730.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B; TrEMBL-Plants: tr|A0A0B2PKY4|A0A0B2PKY4_GLYSO Putative ubiquitin-like-specific protease 2B; Found in the gene: LotjaGi1g1v0137200 LjG1.1_chr1 22398354 22410158 -
n.a. Ubiquitin carboxyl-terminal hydrolase family protein; TAIR: AT4G24560.1 ubiquitin-specific protease 16; Swiss-Prot: sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16; TrEMBL-Plants: tr|I1JGZ3|I1JGZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0138100 LjG1.1_chr1 22527234 22534986 -
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT3G47890.1 Ubiquitin carboxyl-terminal hydrolase-related protein; Swiss-Prot: sp|Q8BL06|UBP54_MOUSE Inactive ubiquitin carboxyl-terminal hydrolase 54; TrEMBL-Plants: tr|A0A1J7HY86|A0A1J7HY86_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0187900 LjG1.1_chr1 36783019 36799823 -
n.a. Cysteine proteinase; TAIR: AT5G50260.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P25803|CYSEP_PHAVU Vignain; TrEMBL-Plants: tr|I1KC88|I1KC88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0230500 LjG1.1_chr1 53964568 53970290 +
n.a. Ufm1-specific protease 2; TAIR: AT3G48380.1 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2; Swiss-Prot: sp|Q9STL8|UFSP_ARATH Probable Ufm1-specific protease; TrEMBL-Plants: tr|V7B0G2|V7B0G2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0230900 LjG1.1_chr1 54127101 54133459 +
n.a. Sentrin-specific protease; TAIR: AT3G48480.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A; TrEMBL-Plants: tr|I3SBV8|I3SBV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0235300 LjG1.1_chr1 55558865 55562446 -
n.a. Sentrin-specific protease; TAIR: AT1G09730.2 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B; TrEMBL-Plants: tr|A0A151TSM7|A0A151TSM7_CAJCA Ubiquitin-like-specific protease 2; Found in the gene: LotjaGi1g1v0347400 LjG1.1_chr1 81558913 81570673 +
n.a. Ubiquitin carboxyl-terminal hydrolase family protein; TAIR: AT4G24560.1 ubiquitin-specific protease 16; Swiss-Prot: sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16; TrEMBL-Plants: tr|A0A0B2PIM3|A0A0B2PIM3_GLYSO Ubiquitin carboxyl-terminal hydrolase 16; Found in the gene: LotjaGi1g1v0347900 LjG1.1_chr1 81613488 81622052 -
n.a. Cysteine proteinase; TAIR: AT5G43060.1 Granulin repeat cysteine protease family protein; Swiss-Prot: sp|Q9FMH8|RD21B_ARATH Probable cysteine protease RD21B; TrEMBL-Plants: tr|I1M8Q5|I1M8Q5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0357600 LjG1.1_chr1 83144114 83147077 +
n.a. Ubiquitin carboxyl-terminal hydrolase family protein; TAIR: AT2G24640.1 ubiquitin-specific protease 19; Swiss-Prot: sp|Q9SJA1|UBP19_ARATH Ubiquitin carboxyl-terminal hydrolase 19; TrEMBL-Plants: tr|A0A151TTH4|A0A151TTH4_CAJCA Ubiquitin carboxyl-terminal hydrolase 19; Found in the gene: LotjaGi1g1v0373600 LjG1.1_chr1 85189088 85195362 -
n.a. Cysteine protease family protein; TAIR: AT1G29090.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P04989|CYSP2_DICDI Cysteine proteinase 2; TrEMBL-Plants: tr|I3RZU2|I3RZU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0408800_LC LjG1.1_chr1 89867897 89869228 -
n.a. Cysteine protease; TAIR: AT5G60360.1 aleurain-like protease; Swiss-Prot: sp|Q8H166|ALEU_ARATH Thiol protease aleurain; TrEMBL-Plants: tr|I3RZU2|I3RZU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0408900_LC LjG1.1_chr1 89871506 89873762 +
n.a. Cysteine protease family protein; TAIR: AT1G09850.1 xylem bark cysteine peptidase 3; Swiss-Prot: sp|P14080|PAPA2_CARPA Chymopapain; TrEMBL-Plants: tr|I3RZU2|I3RZU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0411500_LC LjG1.1_chr1 90210974 90216082 -
n.a. Cysteine proteinase; TAIR: AT4G35350.1 xylem cysteine peptidase 1; Swiss-Prot: sp|O65493|XCP1_ARATH Cysteine protease XCP1; TrEMBL-Plants: tr|G8A0A3|G8A0A3_MEDTR Papain family cysteine protease; Found in the gene: LotjaGi1g1v0411800 LjG1.1_chr1 90287365 90296376 -
n.a. Cysteine protease, putative; TAIR: AT1G09850.1 xylem bark cysteine peptidase 3; Swiss-Prot: sp|P14080|PAPA2_CARPA Chymopapain; TrEMBL-Plants: tr|I3RZU2|I3RZU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0412200_LC LjG1.1_chr1 90309651 90312793 -
n.a. Cysteine protease, putative; TAIR: AT1G09850.1 xylem bark cysteine peptidase 3; Swiss-Prot: sp|P14080|PAPA2_CARPA Chymopapain; TrEMBL-Plants: tr|I3RZU2|I3RZU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0412200_LC LjG1.1_chr1 90309653 90312777 -
n.a. Cysteine protease; TAIR: AT4G23520.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|F4JNL3|RDL6_ARATH Probable cysteine protease RDL6; TrEMBL-Plants: tr|A0A0E0MEC8|A0A0E0MEC8_ORYPU Uncharacterized protein; Found in the gene: LotjaGi1g1v0420600_LC LjG1.1_chr1 91431736 91432661 -
n.a. Cysteine protease family protein; TAIR: AT1G09850.1 xylem bark cysteine peptidase 3; Swiss-Prot: sp|Q9LT78|RD21C_ARATH Probable cysteine protease RD21C; TrEMBL-Plants: tr|A0A1J7IIQ9|A0A1J7IIQ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0423400 LjG1.1_chr1 91757413 91763963 -
n.a. Cysteine proteinase; TAIR: AT4G39090.1 Papain family cysteine protease; Swiss-Prot: sp|P25804|CYSP_PEA Cysteine proteinase 15A; TrEMBL-Plants: tr|A0A151RQM7|A0A151RQM7_CAJCA Cysteine proteinase RD19a; Found in the gene: LotjaGi1g1v0424400 LjG1.1_chr1 91892437 91895727 +
n.a. Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT4G15880.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P59110|SENP1_MOUSE Sentrin-specific protease 1; TrEMBL-Plants: tr|G7KP14|G7KP14_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0474800_LC LjG1.1_chr1 98528171 98531518 +
n.a. Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT4G15880.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P59110|SENP1_MOUSE Sentrin-specific protease 1; TrEMBL-Plants: tr|G7KP14|G7KP14_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0474800_LC LjG1.1_chr1 98528172 98531551 +
n.a. Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT4G15880.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|P59110|SENP1_MOUSE Sentrin-specific protease 1; TrEMBL-Plants: tr|G7KP14|G7KP14_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0474800_LC LjG1.1_chr1 98529276 98531539 +
n.a. Cysteine protease; TAIR: AT2G44140.1 Peptidase family C54 protein; Swiss-Prot: sp|A2Q1V6|ATG4_MEDTR Cysteine protease ATG4; TrEMBL-Plants: tr|I3SYJ4|I3SYJ4_LOTJA Cysteine protease; Found in the gene: LotjaGi1g1v0492700 LjG1.1_chr1 100614215 100621728 -
n.a. Cysteine protease; TAIR: AT2G44140.1 Peptidase family C54 protein; Swiss-Prot: sp|A2Q1V6|ATG4_MEDTR Cysteine protease ATG4; TrEMBL-Plants: tr|I3SYJ4|I3SYJ4_LOTJA Cysteine protease; Found in the gene: LotjaGi1g1v0492700 LjG1.1_chr1 100614508 100621635 -
n.a. Cysteine protease; TAIR: AT2G44140.1 Peptidase family C54 protein; Swiss-Prot: sp|A2Q1V6|ATG4_MEDTR Cysteine protease ATG4; TrEMBL-Plants: tr|I3SYJ4|I3SYJ4_LOTJA Cysteine protease; Found in the gene: LotjaGi1g1v0492700 LjG1.1_chr1 100614991 100620272 -
n.a. Cysteine protease; TAIR: AT2G44140.1 Peptidase family C54 protein; Swiss-Prot: sp|A2Q1V6|ATG4_MEDTR Cysteine protease ATG4; TrEMBL-Plants: tr|I3SYJ4|I3SYJ4_LOTJA Cysteine protease; Found in the gene: LotjaGi1g1v0492700 LjG1.1_chr1 100614991 100620272 -
n.a. Ulp1 protease family, carboxy-terminal domain protein; TAIR: AT2G07240.1 cysteine-type peptidase; Swiss-Prot: sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1; TrEMBL-Plants: tr|A0A072U4K6|A0A072U4K6_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0498800_LC LjG1.1_chr1 101477418 101477910 -
n.a. Sentrin-specific protease; TAIR: AT3G06910.1 UB-like protease 1A; Swiss-Prot: sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A; TrEMBL-Plants: tr|A0A072U4K6|A0A072U4K6_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0499000_LC LjG1.1_chr1 101488960 101489714 -
n.a. Cysteine proteinase; TAIR: AT4G35350.1 xylem cysteine peptidase 1; Swiss-Prot: sp|O65493|XCP1_ARATH Cysteine protease XCP1; TrEMBL-Plants: tr|I1K796|I1K796_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0569300 LjG1.1_chr1 110228376 110230421 +
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT2G40930.1 ubiquitin-specific protease 5; Swiss-Prot: sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5; TrEMBL-Plants: tr|A0A151TAP6|A0A151TAP6_CAJCA Ubiquitin carboxyl-terminal hydrolase 5; Found in the gene: LotjaGi1g1v0657900 LjG1.1_chr1 121845329 121856576 -
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT2G40930.1 ubiquitin-specific protease 5; Swiss-Prot: sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5; TrEMBL-Plants: tr|A0A151TAP6|A0A151TAP6_CAJCA Ubiquitin carboxyl-terminal hydrolase 5; Found in the gene: LotjaGi1g1v0657900 LjG1.1_chr1 121846294 121856340 -
n.a. Ubiquitin carboxyl-terminal hydrolase-like protein; TAIR: AT2G40930.1 ubiquitin-specific protease 5; Swiss-Prot: sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5; TrEMBL-Plants: tr|A0A151TAP6|A0A151TAP6_CAJCA Ubiquitin carboxyl-terminal hydrolase 5; Found in the gene: LotjaGi1g1v0657900 LjG1.1_chr1 121846294 121856361 -
n.a. Ulp1 protease family, carboxy-terminal domain protein; TAIR: AT4G18960.1 K-box region and MADS-box transcription factor family protein; Swiss-Prot: sp|A1UER2|SYP_MYCSK Proline--tRNA ligase; TrEMBL-Plants: tr|G7K006|G7K006_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0687200 LjG1.1_chr1 125438713 125443803 -
n.a. Ulp1 protease family, carboxy-terminal domain protein; TAIR: AT4G18960.1 K-box region and MADS-box transcription factor family protein; Swiss-Prot: sp|A1UER2|SYP_MYCSK Proline--tRNA ligase; TrEMBL-Plants: tr|G7K006|G7K006_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0687200 LjG1.1_chr1 125438799 125443585 -
n.a. Phytochelatin synthase; TAIR: AT5G44070.1 phytochelatin synthase 1 (PCS1); Swiss-Prot: sp|Q2QKL5|PCS3_LOTJA Glutathione gamma-glutamylcysteinyltransferase 3; TrEMBL-Plants: tr|I3S9J9|I3S9J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0706800 LjG1.1_chr1 127525086 127530006 -
n.a. Phytochelatin synthase; TAIR: AT5G44070.1 phytochelatin synthase 1 (PCS1); Swiss-Prot: sp|Q2QKL5|PCS3_LOTJA Glutathione gamma-glutamylcysteinyltransferase 3; TrEMBL-Plants: tr|I3S9J9|I3S9J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0706800 LjG1.1_chr1 127525086 127536443 -
n.a. Phytochelatin synthase; TAIR: AT5G44070.1 phytochelatin synthase 1 (PCS1); Swiss-Prot: sp|Q2QKL5|PCS3_LOTJA Glutathione gamma-glutamylcysteinyltransferase 3; TrEMBL-Plants: tr|I3S9J9|I3S9J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0706800 LjG1.1_chr1 127525344 127536416 -
n.a. Phytochelatin synthase; TAIR: AT5G44070.1 phytochelatin synthase 1 (PCS1); Swiss-Prot: sp|Q2TE74|PCS2_LOTJA Glutathione gamma-glutamylcysteinyltransferase 2; TrEMBL-Plants: tr|I3S9J9|I3S9J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0706800 LjG1.1_chr1 127531967 127536443 -