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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0525900 |
| Transcript ID | LotjaGi1g1v0525900.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0525900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:105269254..105271937) extracted from Lotus japonicus Gifu genome v1.2.
TTTTGCGCTAACAAACTCACGAAACTGCTCTCTTTCTCCCTCAAGTGATCACCGTCTCCCCTGTTTGTCTCTTGCTCCCT GCGTTCTTTTAGTGTAAGATCTGTTCCTTATTTTTGTTCTGTGTTATTCTTTTATGTTATCATTGTTTTCATGAACGAAA CATAATTTTTAGCTTTAGGGTGAACTCACATGAACGTTCTTTTGTGCAAACAATGCACAGGCCATACTACATTCTAAGAT TAATACCTAAGATGAGTTGTTTAACACTTAGGATAACAAATCGAGTTTATTAAATGGTTTTAAATTCGGTGCATAATTAA TTCCATCAAAGAAATATTCAGCTAAATCTGATTCTAATGTGACACATAAAGTTGAGCTTTACACCATTCATTATTCCCAT GCATCAACTTGTTCCTTTGATTGTTAGATTGAAAGAATGGGCAAAAGGGATGAGGGATGTGCCATAGGAATCGACCTTGG AACCACCTACTCGTGTGTTGCAGTTTGGAATGATCAACAACGCAGAGTGGACATCATTCACAATGAACAAGGCAACCCAA TTACTCCATCCTATGTTGCTTTCACAGATGATCAAATGTTAATTGGTTTAGCTGCTAAGAATCAGGCTGCTACAAACCCT GAGAACACTGTTTTTGGTAAAATTTTCAACTGTTTTTTTTACTAGCCTGCTGACAAATGATAAATAGTTGAGAATTTGTT ATTATTGACGCAGATGCTAAGAGGTTGATTGGTAGGAAGTACAGTGATCCCATTATAAAAAATGATATGATGTTATGGCC ATTCAAGGTTATTGCGGGTGTTGATGACAAACCCATGATTGTTGTTAAGTATCACGGTAAGGAGAAGCATCTTTTTGCTG AAGAAATATCATCCATGGTTCTCACAAAGATGCGCGAAATTGCGGAGGCATATCTGGAGTCACCGGTTAAGAATGCAGTT ATCACTGTACCTGCTTATTTCAATGACTCTCAGCGCAAAGCTACCATAGATGCGGGTACCATTGCTGGTCTCAATGTTAA GCGGATAATCAATGAACCCACAGCTGCAGCTATTGCGTATGGCCTTGACAAGAGAAATGATTGTAAGAAACCGCGAAATA TATTCATCTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACAATTGAAGGTAAGGACTTCAAAGTTAAAGCC ACTGCAGGAAATACTCACTTAGGAGGAGAGGATTTCGATAATAGAATGGTGAACTACTTTGTAGAGGAGTTCAAAAGGAA GAGCAAATTGGATATTAGTGGAAATCCTAAAGCCCTGAGGAGGTTGAGAACTGCTTGCGAGAGGGCGAAAAGGACACTCT CATGGACTACATGTACCACAGTTGAGGTAGATTCTTTATTTCAGGGCATTGATTTATGTTCCTCTATCACTCGTGCAAGG TTTGAGGAACTTAACATTGACATGTTTAGAGAATGTATAGAGACAGTGGATAAGTGCCTCAATGATGCTAAGATGGACCA GAGTAGTGTAGATGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCGAAAGTGCAGGAGTTATTGGAGGAATTTTTCA AGGGGAAGAGTCTGTGCAAGAGTATCAATCCTGACGAGGCCGTTGCTTACGGTGCAGCTGTCCAGGCTGCTTTGTTGAGC AAAGGCATTAAGAATGTGCCTGACTTGGTGCTCTATGATGTTACACCGCTGTCTCTTGGTATTTGGATAAAAGGAGCTAT CATGAGTGTGGTGATTCCAAGGAATACTACTATTCCTGTAAAGAAGACACACGGTTACAAGACAAGTGCAGATAACCAAT CCAGTGTCCGGATTAAGGTTTATGAGGGTGAGAGAGCTAGAGCAAGTGATAACAATTTGCTCGGTTCCTTTGATCTTTCT GGCCTCCCTCCTGCTCCTCGTGGCCATCCTTTTGATGTATGCTTTGCTATAGATGAAAATGGCATTCTATGTGTTTCCGC TAAGGAAAAAACCACTGGCAGTAAGAATGAGATCACCATAACCAATGACAAAGGGAGGCTGTCGACCCAAGAAATTAAGA GATTGGTTCAAGAAGCTGAGAGTTTCCAGGCTGAAGACAAGCAATTCCTTAGGAAGGCCAATGCAATGAATTCTTTGGAT GATTACATTTACAAGATGAAGAAAGCCTTGAAGAATGATTGTATTAATTTAAAGCTTACATCAGCAGAAAAGGAGAAGAT CAGTTCTGCAATTACAAAGGCTACAAGTTTGCTTGATGGTGGTAATAATAAGGCATATGAAATACAGGTGCTTGAGGATT ATGTAAAGGAGCTTGAGATCATGTTTAAGCCCATTATAGCCAAGATTGACTTGTTCTCTTCATTTTATTAGAGCTTTGCT TGTACTGACTAGTCATTTTGTCTATGATAACAAATACTTTTATTATAATATTATTAGGAATTAGTTTTAGTTTATATAAA TATTTAGTGGACATGTTTAAATGGTTGACTTAGACATTCAACAATGTTTTATGAATTTGCTTGTGCTGACAGTATTTGGC CCTCTGCCATAAACAATCCTTAGCTTCAAGTCAATCATTTTTATGCTATGAAAATACATGACAGTGGAAAATGATGGATA GTAGATGATATTATGAAATGTTAATGGAGAAAATAGCATTTGGG
CDS sequence (LotjaGi1g1v0525900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAACCCATGATTGTTGTTAAGTATCACGGTAAGGAGAA GCATCTTTTTGCTGAAGAAATATCATCCATGGTTCTCACAAAGATGCGCGAAATTGCGGAGGCATATCTGGAGTCACCGG TTAAGAATGCAGTTATCACTGTACCTGCTTATTTCAATGACTCTCAGCGCAAAGCTACCATAGATGCGGGTACCATTGCT GGTCTCAATGTTAAGCGGATAATCAATGAACCCACAGCTGCAGCTATTGCGTATGGCCTTGACAAGAGAAATGATTGTAA GAAACCGCGAAATATATTCATCTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACAATTGAAGGTAAGGACT TCAAAGTTAAAGCCACTGCAGGAAATACTCACTTAGGAGGAGAGGATTTCGATAATAGAATGGTGAACTACTTTGTAGAG GAGTTCAAAAGGAAGAGCAAATTGGATATTAGTGGAAATCCTAAAGCCCTGAGGAGGTTGAGAACTGCTTGCGAGAGGGC GAAAAGGACACTCTCATGGACTACATGTACCACAGTTGAGGTAGATTCTTTATTTCAGGGCATTGATTTATGTTCCTCTA TCACTCGTGCAAGGTTTGAGGAACTTAACATTGACATGTTTAGAGAATGTATAGAGACAGTGGATAAGTGCCTCAATGAT GCTAAGATGGACCAGAGTAGTGTAGATGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCGAAAGTGCAGGAGTTATT GGAGGAATTTTTCAAGGGGAAGAGTCTGTGCAAGAGTATCAATCCTGACGAGGCCGTTGCTTACGGTGCAGCTGTCCAGG CTGCTTTGTTGAGCAAAGGCATTAAGAATGTGCCTGACTTGGTGCTCTATGATGTTACACCGCTGTCTCTTGGTATTTGG ATAAAAGGAGCTATCATGAGTGTGGTGATTCCAAGGAATACTACTATTCCTGTAAAGAAGACACACGGTTACAAGACAAG TGCAGATAACCAATCCAGTGTCCGGATTAAGGTTTATGAGGGTGAGAGAGCTAGAGCAAGTGATAACAATTTGCTCGGTT CCTTTGATCTTTCTGGCCTCCCTCCTGCTCCTCGTGGCCATCCTTTTGATGTATGCTTTGCTATAGATGAAAATGGCATT CTATGTGTTTCCGCTAAGGAAAAAACCACTGGCAGTAAGAATGAGATCACCATAACCAATGACAAAGGGAGGCTGTCGAC CCAAGAAATTAAGAGATTGGTTCAAGAAGCTGAGAGTTTCCAGGCTGAAGACAAGCAATTCCTTAGGAAGGCCAATGCAA TGAATTCTTTGGATGATTACATTTACAAGATGAAGAAAGCCTTGAAGAATGATTGTATTAATTTAAAGCTTACATCAGCA GAAAAGGAGAAGATCAGTTCTGCAATTACAAAGGCTACAAGTTTGCTTGATGGTGGTAATAATAAGGCATATGAAATACA GGTGCTTGAGGATTATGTAAAGGAGCTTGAGATCATGTTTAAGCCCATTATAGCCAAGATTGACTTGTTCTCTTCATTTT ATTAG
Protein sequence (LotjaGi1g1v0525900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMLWPFKVIAGVDDKPMIVVKYHGKEKHLFAEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDSQRKATIDAGTIA GLNVKRIINEPTAAAIAYGLDKRNDCKKPRNIFIFDLGGGTFDVSLLTIEGKDFKVKATAGNTHLGGEDFDNRMVNYFVE EFKRKSKLDISGNPKALRRLRTACERAKRTLSWTTCTTVEVDSLFQGIDLCSSITRARFEELNIDMFRECIETVDKCLND AKMDQSSVDDVVLVGGSSRIPKVQELLEEFFKGKSLCKSINPDEAVAYGAAVQAALLSKGIKNVPDLVLYDVTPLSLGIW IKGAIMSVVIPRNTTIPVKKTHGYKTSADNQSSVRIKVYEGERARASDNNLLGSFDLSGLPPAPRGHPFDVCFAIDENGI LCVSAKEKTTGSKNEITITNDKGRLSTQEIKRLVQEAESFQAEDKQFLRKANAMNSLDDYIYKMKKALKNDCINLKLTSA EKEKISSAITKATSLLDGGNNKAYEIQVLEDYVKELEIMFKPIIAKIDLFSSFY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 527 | 527 | 6.4E-251 | ||
| PANTHER | 1 | 527 | 527 | 6.4E-251 | – | |
| SUPERFAMILY | 3 | 102 | 100 | 3.88E-31 | ||
| Pfam | 3 | 507 | 505 | 2.1E-185 | ||
| Gene3D | 3 | 29 | 27 | 4.6E-124 | – | |
| Gene3D | 30 | 295 | 266 | 4.6E-124 | – | |
| PRINTS | 57 | 77 | 21 | 4.0E-48 | – | |
| Gene3D | 103 | 282 | 180 | 4.6E-124 | – | |
| SUPERFAMILY | 109 | 297 | 189 | 6.17E-62 | ||
| ProSitePatterns | 114 | 127 | 14 | - | ||
| PRINTS | 120 | 130 | 11 | 4.0E-48 | – | |
| Gene3D | 146 | 223 | 78 | 4.6E-124 | – | |
| PRINTS | 248 | 264 | 17 | 4.0E-48 | – | |
| ProSitePatterns | 251 | 265 | 15 | - | ||
| PRINTS | 280 | 300 | 21 | 4.0E-48 | – | |
| Gene3D | 298 | 424 | 127 | 1.7E-51 | ||
| SUPERFAMILY | 303 | 458 | 156 | 7.06E-52 | ||
| PRINTS | 306 | 325 | 20 | 4.0E-48 | – | |
| PRINTS | 386 | 402 | 17 | 4.0E-48 | – | |
| Gene3D | 425 | 528 | 104 | 6.2E-22 | ||
| SUPERFAMILY | 453 | 527 | 75 | 5.1E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0525900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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