Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0525900 |
Transcript ID | LotjaGi1g1v0525900.1 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0525900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:105269248..105271938) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTGCGCTAACAAACTCACGAAACTGCTCTCTTTCTCCCTCAAGTGATCACCGTCTCCCCTGTTTGTCTCTTGCTCCC TGCGTTCTTTTAGTGTAAGATCTGTTCCTTATTTTTGTTCTGTGTTATTCTTTTATGTTATCATTGTTTTCATGAACGAA ACATAATTTTTAGCTTTAGGGTGAACTCACATGAACGTTCTTTTGTGCAAACAATGCACAGGCCATACTACATTCTAAGA TTAATACCTAAGATGAGTTGTTTAACACTTAGGATAACAAATCGAGTTTATTAAATGGTTTTAAATTCGGTGCATAATTA ATTCCATCAAAGAAATATTCAGCTAAATCTGATTCTAATGTGACACATAAAGTTGAGCTTTACACCATTCATTATTCCCA TGCATCAACTTGTTCCTTTGATTGTTAGATTGAAAGAATGGGCAAAAGGGATGAGGGATGTGCCATAGGAATCGACCTTG GAACCACCTACTCGTGTGTTGCAGTTTGGAATGATCAACAACGCAGAGTGGACATCATTCACAATGAACAAGGCAACCCA ATTACTCCATCCTATGTTGCTTTCACAGATGATCAAATGTTAATTGGTTTAGCTGCTAAGAATCAGGCTGCTACAAACCC TGAGAACACTGTTTTTGGTAAAATTTTCAACTGTTTTTTTTACTAGCCTGCTGACAAATGATAAATAGTTGAGAATTTGT TATTATTGACGCAGATGCTAAGAGGTTGATTGGTAGGAAGTACAGTGATCCCATTATAAAAAATGATATGATGTTATGGC CATTCAAGGTTATTGCGGGTGTTGATGACAAACCCATGATTGTTGTTAAGTATCACGGTAAGGAGAAGCATCTTTTTGCT GAAGAAATATCATCCATGGTTCTCACAAAGATGCGCGAAATTGCGGAGGCATATCTGGAGTCACCGGTTAAGAATGCAGT TATCACTGTACCTGCTTATTTCAATGACTCTCAGCGCAAAGCTACCATAGATGCGGGTACCATTGCTGGTCTCAATGTTA AGCGGATAATCAATGAACCCACAGCTGCAGCTATTGCGTATGGCCTTGACAAGAGAAATGATTGTAAGAAACCGCGAAAT ATATTCATCTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACAATTGAAGGTAAGGACTTCAAAGTTAAAGC CACTGCAGGAAATACTCACTTAGGAGGAGAGGATTTCGATAATAGAATGGTGAACTACTTTGTAGAGGAGTTCAAAAGGA AGAGCAAATTGGATATTAGTGGAAATCCTAAAGCCCTGAGGAGGTTGAGAACTGCTTGCGAGAGGGCGAAAAGGACACTC TCATGGACTACATGTACCACAGTTGAGGTAGATTCTTTATTTCAGGGCATTGATTTATGTTCCTCTATCACTCGTGCAAG GTTTGAGGAACTTAACATTGACATGTTTAGAGAATGTATAGAGACAGTGGATAAGTGCCTCAATGATGCTAAGATGGACC AGAGTAGTGTAGATGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCGAAAGTGCAGGAGTTATTGGAGGAATTTTTC AAGGGGAAGAGTCTGTGCAAGAGTATCAATCCTGACGAGGCCGTTGCTTACGGTGCAGCTGTCCAGGCTGCTTTGTTGAG CAAAGGCATTAAGAATGTGCCTGACTTGGTGCTCTATGATGTTACACCGCTGTCTCTTGGTATTTGGATAAAAGGAGCTA TCATGAGTGTGGTGATTCCAAGGAATACTACTATTCCTGTAAAGAAGACACACGGTTACAAGACAAGTGCAGATAACCAA TCCAGTGTCCGGATTAAGGTTTATGAGGGTGAGAGAGCTAGAGCAAGTGATAACAATTTGCTCGGTTCCTTTGATCTTTC TGGCCTCCCTCCTGCTCCTCGTGGCCATCCTTTTGATGTATGCTTTGCTATAGATGAAAATGGCATTCTATGTGTTTCCG CTAAGGAAAAAACCACTGGCAGTAAGAATGAGATCACCATAACCAATGACAAAGGGAGGCTGTCGACCCAAGAAATTAAG AGATTGGTTCAAGAAGCTGAGAGTTTCCAGGCTGAAGACAAGCAATTCCTTAGGAAGGCCAATGCAATGAATTCTTTGGA TGATTACATTTACAAGATGAAGAAAGCCTTGAAGAATGATTGTATTAATTTAAAGCTTACATCAGCAGAAAAGGAGAAGA TCAGTTCTGCAATTACAAAGGCTACAAGTTTGCTTGATGGTGGTAATAATAAGGCATATGAAATACAGGTGCTTGAGGAT TATGTAAAGGAGCTTGAGATCATGTTTAAGCCCATTATAGCCAAGATTGACTTGTTCTCTTCATTTTATTAGAGCTTTGC TTGTACTGACTAGTCATTTTGTCTATGATAACAAATACTTTTATTATAATATTATTAGGAATTAGTTTTAGTTTATATAA ATATTTAGTGGACATGTTTAAATGGTTGACTTAGACATTCAACAATGTTTTATGAATTTGCTTGTGCTGACAGTATTTGG CCCTCTGCCATAAACAATCCTTAGCTTCAAGTCAATCATTTTTATGCTATGAAAATACATGACAGTGGAAAATGATGGAT AGTAGATGATATTATGAAATGTTAATGGAGAAAATAGCATTTGGGTACCAA
CDS sequence (LotjaGi1g1v0525900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCAAAAGGGATGAGGGATGTGCCATAGGAATCGACCTTGGAACCACCTACTCGTGTGTTGCAGTTTGGAATGATCA ACAACGCAGAGTGGACATCATTCACAATGAACAAGGCAACCCAATTACTCCATCCTATGTTGCTTTCACAGATGATCAAA TGTTAATTGGTTTAGCTGCTAAGAATCAGGCTGCTACAAACCCTGAGAACACTGTTTTTGATGCTAAGAGGTTGATTGGT AGGAAGTACAGTGATCCCATTATAAAAAATGATATGATGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAACC CATGATTGTTGTTAAGTATCACGGTAAGGAGAAGCATCTTTTTGCTGAAGAAATATCATCCATGGTTCTCACAAAGATGC GCGAAATTGCGGAGGCATATCTGGAGTCACCGGTTAAGAATGCAGTTATCACTGTACCTGCTTATTTCAATGACTCTCAG CGCAAAGCTACCATAGATGCGGGTACCATTGCTGGTCTCAATGTTAAGCGGATAATCAATGAACCCACAGCTGCAGCTAT TGCGTATGGCCTTGACAAGAGAAATGATTGTAAGAAACCGCGAAATATATTCATCTTTGACCTTGGTGGTGGTACTTTTG ATGTGTCTCTCCTTACAATTGAAGGTAAGGACTTCAAAGTTAAAGCCACTGCAGGAAATACTCACTTAGGAGGAGAGGAT TTCGATAATAGAATGGTGAACTACTTTGTAGAGGAGTTCAAAAGGAAGAGCAAATTGGATATTAGTGGAAATCCTAAAGC CCTGAGGAGGTTGAGAACTGCTTGCGAGAGGGCGAAAAGGACACTCTCATGGACTACATGTACCACAGTTGAGGTAGATT CTTTATTTCAGGGCATTGATTTATGTTCCTCTATCACTCGTGCAAGGTTTGAGGAACTTAACATTGACATGTTTAGAGAA TGTATAGAGACAGTGGATAAGTGCCTCAATGATGCTAAGATGGACCAGAGTAGTGTAGATGATGTTGTCCTTGTTGGTGG ATCTTCTAGGATTCCGAAAGTGCAGGAGTTATTGGAGGAATTTTTCAAGGGGAAGAGTCTGTGCAAGAGTATCAATCCTG ACGAGGCCGTTGCTTACGGTGCAGCTGTCCAGGCTGCTTTGTTGAGCAAAGGCATTAAGAATGTGCCTGACTTGGTGCTC TATGATGTTACACCGCTGTCTCTTGGTATTTGGATAAAAGGAGCTATCATGAGTGTGGTGATTCCAAGGAATACTACTAT TCCTGTAAAGAAGACACACGGTTACAAGACAAGTGCAGATAACCAATCCAGTGTCCGGATTAAGGTTTATGAGGGTGAGA GAGCTAGAGCAAGTGATAACAATTTGCTCGGTTCCTTTGATCTTTCTGGCCTCCCTCCTGCTCCTCGTGGCCATCCTTTT GATGTATGCTTTGCTATAGATGAAAATGGCATTCTATGTGTTTCCGCTAAGGAAAAAACCACTGGCAGTAAGAATGAGAT CACCATAACCAATGACAAAGGGAGGCTGTCGACCCAAGAAATTAAGAGATTGGTTCAAGAAGCTGAGAGTTTCCAGGCTG AAGACAAGCAATTCCTTAGGAAGGCCAATGCAATGAATTCTTTGGATGATTACATTTACAAGATGAAGAAAGCCTTGAAG AATGATTGTATTAATTTAAAGCTTACATCAGCAGAAAAGGAGAAGATCAGTTCTGCAATTACAAAGGCTACAAGTTTGCT TGATGGTGGTAATAATAAGGCATATGAAATACAGGTGCTTGAGGATTATGTAAAGGAGCTTGAGATCATGTTTAAGCCCA TTATAGCCAAGATTGACTTGTTCTCTTCATTTTATTAG
Protein sequence (LotjaGi1g1v0525900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKRDEGCAIGIDLGTTYSCVAVWNDQQRRVDIIHNEQGNPITPSYVAFTDDQMLIGLAAKNQAATNPENTVFDAKRLIG RKYSDPIIKNDMMLWPFKVIAGVDDKPMIVVKYHGKEKHLFAEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDSQ RKATIDAGTIAGLNVKRIINEPTAAAIAYGLDKRNDCKKPRNIFIFDLGGGTFDVSLLTIEGKDFKVKATAGNTHLGGED FDNRMVNYFVEEFKRKSKLDISGNPKALRRLRTACERAKRTLSWTTCTTVEVDSLFQGIDLCSSITRARFEELNIDMFRE CIETVDKCLNDAKMDQSSVDDVVLVGGSSRIPKVQELLEEFFKGKSLCKSINPDEAVAYGAAVQAALLSKGIKNVPDLVL YDVTPLSLGIWIKGAIMSVVIPRNTTIPVKKTHGYKTSADNQSSVRIKVYEGERARASDNNLLGSFDLSGLPPAPRGHPF DVCFAIDENGILCVSAKEKTTGSKNEITITNDKGRLSTQEIKRLVQEAESFQAEDKQFLRKANAMNSLDDYIYKMKKALK NDCINLKLTSAEKEKISSAITKATSLLDGGNNKAYEIQVLEDYVKELEIMFKPIIAKIDLFSSFY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 6 | 618 | 613 | 4.5E-296 | – | |
PANTHER | 6 | 618 | 613 | 4.5E-296 | ||
SUPERFAMILY | 8 | 193 | 186 | 2.72E-66 | ||
PRINTS | 8 | 21 | 14 | 7.9E-68 | – | |
Pfam | 9 | 598 | 590 | 1.4E-224 | ||
Gene3D | 10 | 386 | 377 | 2.4E-161 | – | |
ProSitePatterns | 12 | 19 | 8 | - | ||
PRINTS | 38 | 50 | 13 | 7.9E-68 | – | |
PRINTS | 60 | 68 | 9 | 7.9E-68 | – | |
Gene3D | 73 | 120 | 48 | 2.4E-161 | – | |
PRINTS | 148 | 168 | 21 | 7.9E-68 | – | |
Gene3D | 194 | 373 | 180 | 2.4E-161 | – | |
SUPERFAMILY | 200 | 388 | 189 | 7.26E-62 | ||
ProSitePatterns | 205 | 218 | 14 | - | ||
PRINTS | 211 | 221 | 11 | 7.9E-68 | – | |
Gene3D | 237 | 314 | 78 | 2.4E-161 | – | |
PRINTS | 339 | 355 | 17 | 7.9E-68 | – | |
ProSitePatterns | 342 | 356 | 15 | - | ||
PRINTS | 371 | 391 | 21 | 7.9E-68 | – | |
Gene3D | 389 | 515 | 127 | 2.2E-51 | ||
SUPERFAMILY | 394 | 549 | 156 | 9.42E-52 | ||
PRINTS | 397 | 416 | 20 | 7.9E-68 | – | |
PRINTS | 477 | 493 | 17 | 7.9E-68 | – | |
Gene3D | 516 | 619 | 104 | 7.9E-22 | ||
SUPERFAMILY | 544 | 618 | 75 | 6.54E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0525900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…