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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0538900 |
| Transcript ID | LotjaGi1g1v0538900.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 70 kDa heat shock protein; TAIR: AT5G02500.1 heat shock cognate protein 70-1; Swiss-Prot: sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2; TrEMBL-Plants: tr|A0A151S7R0|A0A151S7R0_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0538900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:106733266..106736270) extracted from Lotus japonicus Gifu genome v1.2.
CTTTCCCTCTTGTTCAATTCACATAACCTAACACCTTCACTCTCACACGCTTCTTCTTCTTCAATTCAGGGTTTGATTTC GCCGGAGAATGGCCGTAAAAGGAGAAGGACCGGCGATCGGAATCGACCTCGGCACCACGTACTCCTGCGTCGGAGTGTGG CAGCATGATCGCGTTGAGATCATCGCCAATGATCAAGGGAACCGTACCACGCCGTCTTACGTTGCGTTTACTGACTCTGA GAGGTTGATTGGTGATGCTGCGAAGAATCAGGTTGCCATGAACCCGATCAACACCGTCTTCGGTAATTCATCTGATTCTC CAACTTTCTTTTGTTGATTCACGAATCTTGTACTGTTTATTTGAACGTTTTATTGTTATCAATGATTGTTGACCTCGTTT TAAGTAATTGAATCTGTTGTTACTTTGGTGTTGAATATTAGTGATTAGGAATTTTGTTGAATTAGTTGGTAGTAGATGTT CTTCTCTTTGATTTGTGTTGTGTTGTAGGGTTTTGAATCTAGAACAATTTGACATGTTAAATGATCATAGTTAAATACTA ATTCTATTTATGGTGAAAATTATTACTAGAGATTAGCAATTTTCTTAACTTAACCTATATTTAATATTTTATTGATGTTT AAGTTATTTGTTTAATTTTTAATGTTAATTGTTTTCATAATTTCCTTAAGATGTGACTAATATTGATTTAAATTTTAAAC AACAATAATTACAAGAAGTGACAAAAAAAAATAACTAGAAAAAATTTATTCGACTACAATTATAAGAAAGGAACAGAGGA AATAGATGTTTTTGTTTGTTTCTGTTACATGATGCTTTTGTGTGTGTTGTGGAAGGTTTTCTTTTTGGTGTGGTTTCAGT GGTTGTTTGAGTGATTGTTGTTAACTGAGGATTATTGTTGTTTTGCAGACGCGAAGAGGTTAATTGGTAGGAGAATTAGC GACCCTTCTGTTCAGAGTGACATGAAGTTGTGGCCATTCAAGGTCATTTCTGGTCCTGGAGAGAAACCCATGATTGGTGT TAACTACAAGGGTGAGGACAAGCAGTTTGCAGCTGAGGAAATCTCGTCTATGGTCCTAACAAAGATGAGGGAGATTGCTG AGGCTTTCCTTGGTTCGACCGTGAAGAATGCTGTCGTCACTGTACCTGCATACTTCAATGACTCTCAGCGTCAAGCTACC AAAGATGCCGGTGTTATTGCTGGCCTCAATGTTATGAGAATCATAAATGAGCCAACTGCTGCGGCTATTGCATATGGGCT TGACAAGAAGGCTACCAGTGTTGGTGAGAAGAATGTTTTGATCTTTGATCTTGGAGGTGGTACTTTTGATGTTTCTCTCC TCACCATTGAGGAGGGTATCTTTGAAGTTAAGGCCACAGCTGGAGATACCCATCTTGGAGGAGAGGACTTTGATAACAGA ATGGTGAACCACTTTGTGCAGGAGTTTAAGAGGAAGAACAAGAAGGACATTAGTGGAAACCCAAGAGCTCTCAGGAGGTT GAGAACTTCTTGTGAGAGAGCAAAGAGGACGCTCTCATCCACTGCCCAAACCACCATTGAGATTGATTCTCTGTATGAGG GTGTTGACTTCTATTCAACCATCACCCGAGCTAGGTTTGAGGAACTTAACATGGACCTCTTTAGGAAGTGTATGGAGCCT GTGGAGAAGTGTCTCAGGGATGCAAAGATGGACAAGAGCACTGTTCATGATGTTGTGCTTGTTGGTGGCTCTACTAGAAT TCCCAAAGTTCAGCAGCTGTTGCAGGACTTGTTCAACGGGAAGGATCTGTGCAAGAGCATCAACCCCGACGAAGCTGTTG CTTATGGAGCCGCTGTCCAGGCAGCTATATTGAGTGGTGAAGGCAATGAGAAGGTTCAAGATTTGTTGCTTTTGGATGTC ACCCCATTGTCTCTAGGTTTAGAGACTGCTGGAGGTGTCATGACTGTGTTGATTCCAAGGAACACTACAATTCCTACCAA GAAGGAACAAGTGTTCTCTACATATTCAGACAACCAACCTGGTGTGTTGATTCAAGTATACGAGGGAGAGAGAACAAGAA CTAGGGATAACAACTTGCTGGGCAAGTTTGAGCTTTCAGGCATTCCTCCAGCTCCTCGTGGGGTTCCTCAGATCAATGTT TGCTTTGACATCGATGCCAATGGTATCTTGAATGTCTCTGCTGAGGACAAGACCACCGGGCAGAAGAACAATATCACCAT TACCAACGACAAGGGAAGATTGTCAAAGGAAGAAATTGAGAAGATGGTTCAAGAAGCAGAGAAGTACAAGTCTGAGGACG AGGAGCACAAGAAGAAGGTTGAGGCAAAGAACGCTTTGGAGAACTACGCATACAACATGAGAAACACCATCAAGGATGAG AAGATCAGTTCAAAGCTTTCTTCAGAGGACAAGACAAAGATCGACGATGCCATTGAGCAGGCCATTCAATGGCTTGATGC AAATCAGCTTGCTGAAGCTGATGAATTTGAAGACAAGATGAAGGAGCTCGAGAGCATATGCAATCCTATCATTGCCAAAA TGTACCAAGGAGGTGCTGCTCCTGGTGCTGAAGTGGATGATGATGCTCCACCTGCTGCTGGTAGCGGTGCTGGCCCGAAG ATTGAGGAGGTCGATTAAATTAGATTGGTTAGGTGTTGGTAGAGATGAGTATTTTTGGTTACTGCTATTATAGATTTTTT GCTTTCCTGATTACGTTGTTGTTTTCATTGTCATTGGTTTGACAATTGAAAATTTAGTATACTTTGATCATTGTTGTTTT ACGTTGGATAATATAATTTTAGTGTTAATTTTTCGCAATATTTCAGTCTCAAGCTTATTACTTGGTTTATCGTTGTCATG TTTATGTTTAAGTACTAAAATATTCACCATCTCCAATATTTGAATCTAAATGTGTTATAAGAGACCCGTTAAACAGTTTT GATGGATTTCCTCGCCAGTAATGCGAGCCATAGAGTTAAATGCAG
CDS sequence (LotjaGi1g1v0538900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGTAAAAGGAGAAGGACCGGCGATCGGAATCGACCTCGGCACCACGTACTCCTGCGTCGGAGTGTGGCAGCATGA TCGCGTTGAGATCATCGCCAATGATCAAGGGAACCGTACCACGCCGTCTTACGTTGCGTTTACTGACTCTGAGAGGTTGA TTGGTGATGCTGCGAAGAATCAGGTTGCCATGAACCCGATCAACACCGTCTTCGACGCGAAGAGGTTAATTGGTAGGAGA ATTAGCGACCCTTCTGTTCAGAGTGACATGAAGTTGTGGCCATTCAAGGTCATTTCTGGTCCTGGAGAGAAACCCATGAT TGGTGTTAACTACAAGGGTGAGGACAAGCAGTTTGCAGCTGAGGAAATCTCGTCTATGGTCCTAACAAAGATGAGGGAGA TTGCTGAGGCTTTCCTTGGTTCGACCGTGAAGAATGCTGTCGTCACTGTACCTGCATACTTCAATGACTCTCAGCGTCAA GCTACCAAAGATGCCGGTGTTATTGCTGGCCTCAATGTTATGAGAATCATAAATGAGCCAACTGCTGCGGCTATTGCATA TGGGCTTGACAAGAAGGCTACCAGTGTTGGTGAGAAGAATGTTTTGATCTTTGATCTTGGAGGTGGTACTTTTGATGTTT CTCTCCTCACCATTGAGGAGGGTATCTTTGAAGTTAAGGCCACAGCTGGAGATACCCATCTTGGAGGAGAGGACTTTGAT AACAGAATGGTGAACCACTTTGTGCAGGAGTTTAAGAGGAAGAACAAGAAGGACATTAGTGGAAACCCAAGAGCTCTCAG GAGGTTGAGAACTTCTTGTGAGAGAGCAAAGAGGACGCTCTCATCCACTGCCCAAACCACCATTGAGATTGATTCTCTGT ATGAGGGTGTTGACTTCTATTCAACCATCACCCGAGCTAGGTTTGAGGAACTTAACATGGACCTCTTTAGGAAGTGTATG GAGCCTGTGGAGAAGTGTCTCAGGGATGCAAAGATGGACAAGAGCACTGTTCATGATGTTGTGCTTGTTGGTGGCTCTAC TAGAATTCCCAAAGTTCAGCAGCTGTTGCAGGACTTGTTCAACGGGAAGGATCTGTGCAAGAGCATCAACCCCGACGAAG CTGTTGCTTATGGAGCCGCTGTCCAGGCAGCTATATTGAGTGGTGAAGGCAATGAGAAGGTTCAAGATTTGTTGCTTTTG GATGTCACCCCATTGTCTCTAGGTTTAGAGACTGCTGGAGGTGTCATGACTGTGTTGATTCCAAGGAACACTACAATTCC TACCAAGAAGGAACAAGTGTTCTCTACATATTCAGACAACCAACCTGGTGTGTTGATTCAAGTATACGAGGGAGAGAGAA CAAGAACTAGGGATAACAACTTGCTGGGCAAGTTTGAGCTTTCAGGCATTCCTCCAGCTCCTCGTGGGGTTCCTCAGATC AATGTTTGCTTTGACATCGATGCCAATGGTATCTTGAATGTCTCTGCTGAGGACAAGACCACCGGGCAGAAGAACAATAT CACCATTACCAACGACAAGGGAAGATTGTCAAAGGAAGAAATTGAGAAGATGGTTCAAGAAGCAGAGAAGTACAAGTCTG AGGACGAGGAGCACAAGAAGAAGGTTGAGGCAAAGAACGCTTTGGAGAACTACGCATACAACATGAGAAACACCATCAAG GATGAGAAGATCAGTTCAAAGCTTTCTTCAGAGGACAAGACAAAGATCGACGATGCCATTGAGCAGGCCATTCAATGGCT TGATGCAAATCAGCTTGCTGAAGCTGATGAATTTGAAGACAAGATGAAGGAGCTCGAGAGCATATGCAATCCTATCATTG CCAAAATGTACCAAGGAGGTGCTGCTCCTGGTGCTGAAGTGGATGATGATGCTCCACCTGCTGCTGGTAGCGGTGCTGGC CCGAAGATTGAGGAGGTCGATTAA
Protein sequence (LotjaGi1g1v0538900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRR ISDPSVQSDMKLWPFKVISGPGEKPMIGVNYKGEDKQFAAEEISSMVLTKMREIAEAFLGSTVKNAVVTVPAYFNDSQRQ ATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD NRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGVDFYSTITRARFEELNMDLFRKCM EPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDLFNGKDLCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLL DVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI NVCFDIDANGILNVSAEDKTTGQKNNITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIK DEKISSKLSSEDKTKIDDAIEQAIQWLDANQLAEADEFEDKMKELESICNPIIAKMYQGGAAPGAEVDDDAPPAAGSGAG PKIEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 627 | 624 | 0.0 | – | |
| PANTHER | 4 | 627 | 624 | 0.0 | ||
| SUPERFAMILY | 8 | 191 | 184 | 8.55E-70 | ||
| PRINTS | 8 | 21 | 14 | 8.0E-88 | – | |
| CDD | 9 | 387 | 379 | 0.0 | – | |
| Pfam | 9 | 618 | 610 | 9.6E-262 | ||
| Gene3D | 10 | 384 | 375 | 2.8E-175 | – | |
| ProSitePatterns | 12 | 19 | 8 | - | ||
| PRINTS | 36 | 48 | 13 | 8.0E-88 | – | |
| PRINTS | 58 | 66 | 9 | 8.0E-88 | – | |
| Gene3D | 71 | 118 | 48 | 2.8E-175 | – | |
| PRINTS | 146 | 166 | 21 | 8.0E-88 | – | |
| Gene3D | 192 | 371 | 180 | 2.8E-175 | – | |
| SUPERFAMILY | 198 | 388 | 191 | 1.05E-68 | ||
| ProSitePatterns | 203 | 216 | 14 | - | ||
| PRINTS | 209 | 219 | 11 | 8.0E-88 | – | |
| Gene3D | 235 | 312 | 78 | 2.8E-175 | – | |
| PRINTS | 337 | 353 | 17 | 8.0E-88 | – | |
| ProSitePatterns | 340 | 354 | 15 | - | ||
| PRINTS | 369 | 389 | 21 | 8.0E-88 | – | |
| Gene3D | 387 | 515 | 129 | 4.4E-64 | ||
| SUPERFAMILY | 392 | 549 | 158 | 5.36E-65 | ||
| PRINTS | 396 | 415 | 20 | 8.0E-88 | – | |
| PRINTS | 477 | 493 | 17 | 8.0E-88 | – | |
| Gene3D | 516 | 619 | 104 | 1.2E-39 | ||
| Coils | 521 | 541 | 21 | - | – | |
| SUPERFAMILY | 543 | 624 | 82 | 5.49E-30 | ||
| MobiDBLite | 620 | 647 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0538900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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