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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0538900 |
| Transcript ID | LotjaGi1g1v0538900.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 70 kDa heat shock protein; TAIR: AT5G02500.1 heat shock cognate protein 70-1; Swiss-Prot: sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2; TrEMBL-Plants: tr|A0A151S7R0|A0A151S7R0_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0538900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:106733613..106736191) extracted from Lotus japonicus Gifu genome v1.2.
CGCCGGAGAATGGCCGTAAAAGGAGAAGGACCGGCGATCGGAATCGACCTCGGCACCACGTACTCCTGCGTCGGAGTGTG GCAGCATGATCGCGTTGAGATCATCGCCAATGATCAAGGGAACCGTACCACGCCGTCTTACGTTGCGTTTACTGACTCTG AGAGGTTGATTGGTGATGCTGCGAAGAATCAGGTTGCCATGAACCCGATCAACACCGTCTTCGGTAATTCATCTGATTCT CCAACTTTCTTTTGTTGATTCACGAATCTTGTACTGTTTATTTGAACGTTTTATTGTTATCAATGATTGTTGACCTCGTT TTAAGTAATTGAATCTGTTGTTACTTTGGTGTTGAATATTAGTGATTAGGAATTTTGTTGAATTAGTTGGTAGTAGATGT TCTTCTCTTTGATTTGTGTTGTGTTGTAGGGTTTTGAATCTAGAACAATTTGACATGTTAAATGATCATAGTTAAATACT AATTCTATTTATGGTGAAAATTATTACTAGAGATTAGCAATTTTCTTAACTTAACCTATATTTAATATTTTATTGATGTT TAAGTTATTTGTTTAATTTTTAATGTTAATTGTTTTCATAATTTCCTTAAGATGTGACTAATATTGATTTAAATTTTAAA CAACAATAATTACAAGAAGTGACAAAAAAAAATAACTAGAAAAAATTTATTCGACTACAATTATAAGAAAGGAACAGAGG AAATAGATGTTTTTGTTTGTTTCTGTTACATGATGCTTTTGTGTGTGTTGTGGAAGGTTTTCTTTTTGGTGTGGTTTCAG TGGTTGTTTGAGTGATTGTTGTTAACTGAGGATTATTGTTGTTTTGCAGACGCGAAGAGGTTAATTGGTAGGAGAATTAG CGACCCTTCTGTTCAGAGTGACATGAAGTTGTGGCCATTCAAGGTCATTTCTGGTCCTGGAGAGAAACCCATGATTGGTG TTAACTACAAGGGTGAGGACAAGCAGTTTGCAGCTGAGGAAATCTCGTCTATGGTCCTAACAAAGATGAGGGAGATTGCT GAGGCTTTCCTTGGTTCGACCGTGAAGAATGCTGTCGTCACTGTACCTGCATACTTCAATGACTCTCAGCGTCAAGCTAC CAAAGATGCCGGTGTTATTGCTGGCCTCAATGTTATGAGAATCATAAATGAGCCAACTGCTGCGGCTATTGCATATGGGC TTGACAAGAAGGCTACCAGTGTTGGTGAGAAGAATGTTTTGATCTTTGATCTTGGAGGTGGTACTTTTGATGTTTCTCTC CTCACCATTGAGGAGGGTATCTTTGAAGTTAAGGCCACAGCTGGAGATACCCATCTTGGAGGAGAGGACTTTGATAACAG AATGGTGAACCACTTTGTGCAGGAGTTTAAGAGGAAGAACAAGAAGGACATTAGTGGAAACCCAAGAGCTCTCAGGAGGT TGAGAACTTCTTGTGAGAGAGCAAAGAGGACGCTCTCATCCACTGCCCAAACCACCATTGAGATTGATTCTCTGTATGAG GGTGTTGACTTCTATTCAACCATCACCCGAGCTAGGTTTGAGGAACTTAACATGGACCTCTTTAGGAAGTGTATGGAGCC TGTGGAGAAGTGTCTCAGGGATGCAAAGATGGACAAGAGCACTGTTCATGATGTTGTGCTTGTTGGTGGCTCTACTAGAA TTCCCAAAGTTCAGCAGCTGTTGCAGGACTTGTTCAACGGGAAGGATCTGTGCAAGAGCATCAACCCCGACGAAGCTGTT GCTTATGGAGCCGCTGTCCAGGCAGCTATATTGAGTGGTGAAGGCAATGAGAAGGTTCAAGATTTGTTGCTTTTGGATGT CACCCCATTGTCTCTAGGTTTAGAGACTGCTGGAGGTGTCATGACTGTGTTGATTCCAAGGAACACTACAATTCCTACCA AGAAGGAACAAGTGTTCTCTACATATTCAGACAACCAACCTGGTGTGTTGATTCAAGTATACGAGGGAGAGAGAACAAGA ACTAGGGATAACAACTTGCTGGGCAAGTTTGAGCTTTCAGGCATTCCTCCAGCTCCTCGTGGGGTTCCTCAGATCAATGT TTGCTTTGACATCGATGCCAATGGTATCTTGAATGTCTCTGCTGAGGACAAGACCACCGGGCAGAAGAACAATATCACCA TTACCAACGACAAGGGAAGATTGTCAAAGGAAGAAATTGAGAAGATGGTTCAAGAAGCAGAGAAGTACAAGTCTGAGGAC GAGGAGCACAAGAAGAAGGTTGAGGCAAAGAACGCTTTGGAGAACTACGCATACAACATGAGAAACACCATCAAGGATGA GAAGATCAGTTCAAAGCTTTCTTCAGAGGACAAGACAAAGATCGACGATGCCATTGAGCAGGCCATTCAATGGCTTGATG CAAATCAGCTTGCTGAAGCTGATGAATTTGAAGACAAGATGAAGGAGCTCGAGAGCATATGCAATCCTATCATTGCCAAA ATGTACCAAGGAGGTGCTGCTCCTGGTGCTGAAGTGGATGATGATGCTCCACCTGCTGCTGGTAGCGGTGCTGGCCCGAA GATTGAGGAGGTCGATTAA
CDS sequence (LotjaGi1g1v0538900.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGTAAAAGGAGAAGGACCGGCGATCGGAATCGACCTCGGCACCACGTACTCCTGCGTCGGAGTGTGGCAGCATGA TCGCGTTGAGATCATCGCCAATGATCAAGGGAACCGTACCACGCCGTCTTACGTTGCGTTTACTGACTCTGAGAGGTTGA TTGGTGATGCTGCGAAGAATCAGGTTGCCATGAACCCGATCAACACCGTCTTCGACGCGAAGAGGTTAATTGGTAGGAGA ATTAGCGACCCTTCTGTTCAGAGTGACATGAAGTTGTGGCCATTCAAGGTCATTTCTGGTCCTGGAGAGAAACCCATGAT TGGTGTTAACTACAAGGGTGAGGACAAGCAGTTTGCAGCTGAGGAAATCTCGTCTATGGTCCTAACAAAGATGAGGGAGA TTGCTGAGGCTTTCCTTGGTTCGACCGTGAAGAATGCTGTCGTCACTGTACCTGCATACTTCAATGACTCTCAGCGTCAA GCTACCAAAGATGCCGGTGTTATTGCTGGCCTCAATGTTATGAGAATCATAAATGAGCCAACTGCTGCGGCTATTGCATA TGGGCTTGACAAGAAGGCTACCAGTGTTGGTGAGAAGAATGTTTTGATCTTTGATCTTGGAGGTGGTACTTTTGATGTTT CTCTCCTCACCATTGAGGAGGGTATCTTTGAAGTTAAGGCCACAGCTGGAGATACCCATCTTGGAGGAGAGGACTTTGAT AACAGAATGGTGAACCACTTTGTGCAGGAGTTTAAGAGGAAGAACAAGAAGGACATTAGTGGAAACCCAAGAGCTCTCAG GAGGTTGAGAACTTCTTGTGAGAGATTCTATTCAACCATCACCCGAGCTAGGTTTGAGGAACTTAACATGGACCTCTTTA GGAAGTGTATGGAGCCTGTGGAGAAGTGTCTCAGGGATGCAAAGATGGACAAGAGCACTGTTCATGATGTTGTGCTTGTT GGTGGCTCTACTAGAATTCCCAAAGTTCAGCAGCTGTTGCAGGACTTGTTCAACGGGAAGGATCTGTGCAAGAGCATCAA CCCCGACGAAGCTGTTGCTTATGGAGCCGCTGTCCAGGCAGCTATATTGAGTGGTGAAGGCAATGAGAAGGTTCAAGATT TGTTGCTTTTGGATGTCACCCCATTGTCTCTAGGTTTAGAGACTGCTGGAGGTGTCATGACTGTGTTGATTCCAAGGAAC ACTACAATTCCTACCAAGAAGGAACAAGTGTTCTCTACATATTCAGACAACCAACCTGGTGTGTTGATTCAAGTATACGA GGGAGAGAGAACAAGAACTAGGGATAACAACTTGCTGGGCAAGTTTGAGCTTTCAGGCATTCCTCCAGCTCCTCGTGGGG TTCCTCAGATCAATGTTTGCTTTGACATCGATGCCAATGGTATCTTGAATGTCTCTGCTGAGGACAAGACCACCGGGCAG AAGAACAATATCACCATTACCAACGACAAGGGAAGATTGTCAAAGGAAGAAATTGAGAAGATGGTTCAAGAAGCAGAGAA GTACAAGTCTGAGGACGAGGAGCACAAGAAGAAGGTTGAGGCAAAGAACGCTTTGGAGAACTACGCATACAACATGAGAA ACACCATCAAGGATGAGAAGATCAGTTCAAAGCTTTCTTCAGAGGACAAGACAAAGATCGACGATGCCATTGAGCAGGCC ATTCAATGGCTTGATGCAAATCAGCTTGCTGAAGCTGATGAATTTGAAGACAAGATGAAGGAGCTCGAGAGCATATGCAA TCCTATCATTGCCAAAATGTACCAAGGAGGTGCTGCTCCTGGTGCTGAAGTGGATGATGATGCTCCACCTGCTGCTGGTA GCGGTGCTGGCCCGAAGATTGAGGAGGTCGATTAA
Protein sequence (LotjaGi1g1v0538900.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRR ISDPSVQSDMKLWPFKVISGPGEKPMIGVNYKGEDKQFAAEEISSMVLTKMREIAEAFLGSTVKNAVVTVPAYFNDSQRQ ATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD NRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLV GGSTRIPKVQQLLQDLFNGKDLCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRN TTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQ KNNITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKISSKLSSEDKTKIDDAIEQA IQWLDANQLAEADEFEDKMKELESICNPIIAKMYQGGAAPGAEVDDDAPPAAGSGAGPKIEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 275 | 272 | 0.0 | – | |
| PANTHER | 4 | 275 | 272 | 0.0 | ||
| PRINTS | 8 | 21 | 14 | 1.5E-81 | – | |
| SUPERFAMILY | 8 | 191 | 184 | 1.0E-69 | ||
| CDD | 9 | 364 | 356 | 0.0 | – | |
| Pfam | 9 | 275 | 267 | 8.4E-130 | ||
| ProSitePatterns | 12 | 19 | 8 | - | ||
| PRINTS | 36 | 48 | 13 | 1.5E-81 | – | |
| PRINTS | 58 | 66 | 9 | 1.5E-81 | – | |
| Gene3D | 71 | 122 | 52 | 6.6E-30 | – | |
| PRINTS | 146 | 166 | 21 | 1.5E-81 | – | |
| SUPERFAMILY | 198 | 365 | 168 | 4.3E-57 | ||
| Gene3D | 199 | 277 | 79 | 3.6E-25 | – | |
| ProSitePatterns | 203 | 216 | 14 | - | ||
| PANTHER | 276 | 604 | 329 | 0.0 | – | |
| PANTHER | 276 | 604 | 329 | 0.0 | ||
| Pfam | 277 | 595 | 319 | 4.6E-118 | ||
| Gene3D | 278 | 289 | 12 | 3.3E-35 | – | |
| Gene3D | 290 | 348 | 59 | 3.3E-35 | – | |
| PRINTS | 314 | 330 | 17 | 1.5E-81 | – | |
| ProSitePatterns | 317 | 331 | 15 | - | ||
| PRINTS | 346 | 366 | 21 | 1.5E-81 | – | |
| Gene3D | 349 | 361 | 13 | 3.3E-35 | – | |
| Gene3D | 364 | 492 | 129 | 4.2E-64 | ||
| SUPERFAMILY | 369 | 526 | 158 | 5.1E-65 | ||
| PRINTS | 373 | 392 | 20 | 1.5E-81 | – | |
| PRINTS | 454 | 470 | 17 | 1.5E-81 | – | |
| Gene3D | 493 | 596 | 104 | 1.1E-39 | ||
| Coils | 498 | 518 | 21 | - | – | |
| SUPERFAMILY | 520 | 601 | 82 | 5.23E-30 | ||
| MobiDBLite | 597 | 624 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0538900.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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