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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0539900 |
Transcript ID | LotjaGi1g1v0539900.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|Q9LHA8|MD37C_ARATH Probable mediator of RNA polymerase II transcription subunit 37c; TrEMBL-Plants: tr|A0A151S7J1|A0A151S7J1_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0539900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:106852685..106861639) extracted from Lotus japonicus Gifu genome v1.2.
GGGACTTCTAACAACCTTTTTACTCTATAAATAGTGAAAGAAGAGAGGAAAACGAAAAACACTCAAAAAGAACCAAGGTC TCTAGCATTTTAAGATTTTGGACTGCAAAGATGTAAGATATCTCATCTATCAATGTTATTCCTTTCGCCTTTTCTTGTTT TGATGTTGCTTGTTCTGCTCTCTCCAGCCATGTTAAGAATGCAATGAATTGTTAGTTAGCTATTTATTTTTTAAGTTTGT TCCCGAGCTTGAATTCACTCCAATTTTTATCTTGTACATATTGGCCATCTTTTCTGGCTCTTATAGTCAACCAAGGAATC ATAACCAGCATTAAACACAGTAAAATTAACACTTTGGCCTATACGACCTTAAACCCCCATCCATATAATTTTCTGAAATC CCTTTTGAGTTCCTTACAAATTCAAGGCCAAAATTTAACAGAACAGAGTTCGTCTTCCATTATCTATCCAACCAAGTCGC GAGTCCCCGGATAAGGATATTGGGAGCATGTAGTGCTGTTTTTTTGTCTTCTTTAGGCTTTGGTTTTGGCTGGAGTTGCT TTGTTATTTCTTTTGTTAAGTCTGTTGGGGTGGTTTTTTCCTCTTTTGGCGGGCTCTTTGCTCAGGCTAGAGTCTTTTTG ATTAGCCTTTTATTGAGAGGTTTTGTATCTCGATAACTCATCATTTCAATAAAACTTTTGCTTTAGAAAAAAAAGATTTT GGGTTGTGGTTGCCATGTTAACATTTTATATATTTCTCCCTTCATACATACTCCTTCCAATCATTTTTATAAGAAAAACT TTAACAAAATCACACAAATCAATGAAACTAATATTGGGTGCTTGTAATTTCCCTTTAAATTTTTGTATGAGGAATGAGTC TCTTTGCATTTGAATGAATTATTTGACTTAATTTTGTAATAGTATTTTTTATAAAAATGAAAAAAAAAATTTCAAAGTGT TTCTTATAAAAATGATTGGATGAAGTATTAAATAAATGTGAATTAAAACCGTTTTAAATCTTACTCACCGTTTTAATTTT TCATAAATTTCTCATTGATGAAAACCAAAATGGGTTCTTCTATGGTACTAAATAGCTTCCTGCGTCTGACTGCAGTTGAA AGAGAATGGCAAGGCAAGATGAGGGATTGGTGATAGGAATCGACCTCGGCACGACGTACTCATGTGTTGCAGTATGGGAA GAGCAACACTGTCGAGTGGAGATCATCCACAATGACCAAGGAAACAAAACCACTCCTTCTTTTGTTGCTTTCACAGATCA CCAAAGATTGATTGGCGATGCTGCTAAAAATCAGGCTGCAACAAACCCAGCAAACACTGTCTTTGGTAATAAATTTTTCT TTTGTTAATGGACTCATTTCAATGATTATTTTGATGTTGCTTTTAATTGAACAAATATATGGTCACATTTTTTTATAAGC AAAGTGCATTATAGCAAGCACAAGCGTGCTTGAATCCTATAACAAATAGGCTTAATTGCACTTTTCGTCCCTCATCTATA CCTCTTGTGCAAATTTGGTCCCCTTTGTTTAAAAGGAGCAATTTTGGTACATCAAAGAATAGGATGTGACAATTAGGTCC GCCGTTAGCTTCCGTCCAATTTTAAACGGAATATTCTTATTGAGATTTTTTTTATTACACCACCATAACACATCAGCAAA TAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAATAAAACAAATTAAATAAAGAATGAAATTAAACGTAT TGAACCCTAATCCCAATTTTCCCCAGCCACCATCACTCTCAACTCCCTTGAATCCTCCATCATCCACAACCAACATTTTC CTCCACCTTCGAGCATCTTCATCGTCCTCCCCTTCATCTTCACACACGTAGAGAGACAAATCCAGATCGAGAGAATCGGT GGTGCGTCTCCAAATAGAGAGAAAATGTCGGTGCTTCTCCAGATCGAGAGAAAGGGAAGCGGGGAAAGGGTGGACGCACA ACAAGGAGAGAGACTTGATGCGAGCTTTGATGGTGTTGGTGAAGATGGTGCGGTGCGTGATGCCATGGCCAAGGAGCGGT TCTGTCAACGACGACCATGGTCTGAACCTCGACTGTGGGCTGGATCGAGGTTGCGCGGCGGTGACAAAAGTATGCTCTGC GGCGAAAGTTGGTGGCTGAGATGAGATTAGGGCCTCTGTTCTTTATGGTATGTTGGAATTTATGTTGTGGTTCCAGAATT TATGTTATGGGTTTGAATCAGATGCAATTTCAGATTGGAATTTGTGGTGGTGAAAAGTTTTGCAGCAGGGCTTAGTGGTG GAGAAGAAAGAGGTGATATGCAGAGGATTGCTTTGGGTTTATTGTTTGGATCAGCAAGGATAAGTTGAAAGGTTTTTGTT GTTGATTAATTCCAGATGAAGATGGAGGTTTTTTTTTTGAACGTATGAAGATGGAGGTTGATTAGATTAATAATTTGATT ACGATTAAAGTTAAATAAATTTTGATTTTTTTGATTTTTAAATTTTAATTACTTTTATGTTGTATTACGTGGAGTCCTAG TGGCATCTAAGTGGCAAAATGTGTTAGGGCCACGTTATGAATGAGCGCCACGTATGAAAAATCTGTTAGGAATTGAACGG AATCTAACGGAAGGATCAAATTGTCACAAATTGATCTTTGATGTACCAAAATTGCTCCTTTTAAATAAAAGGGACCAAAA TTGCACAAGAGGCATAGATGAGGGACGAAAAGTGCAATTAAGCCTAACAAATATATGGCAACATAACTCATGATTGTTAC CTTTACGGCAAAAAATATCATTTTATCAAGTGCTCAAGTTTGCTCTCTAACTTTACCTTGTTTCAAATTATTTCTTTCAA GTTATTAAATTAATAGTGTTTTGTTTTCTGCTAGGCTACCTTGACTTGATTAACATCATTAACAAATAATTCCTAACTTG TTCCTATGTGACACTGATTATGTTTTGAAGATGGGAAGAGGTTAATTGGAAGAAAATATAGTGATCCAGTTATTAAAGAT GATCTAATGTTTTGGCCATTCAAGGTCATTGCTGGTGCTGATGACAAACCCATGATCATTATTAAGCACAAGGGACAGGA GAAGCATATTTCTGCTGAGGAAATTTCTGCCACAGTCCTGACAAAGATGCGCGAGACTGCAGAGGCATATCTGGAGTCAC CAATAAAGAATGCTGTTGTTACAGTGCCTGCTTATTTCAACGACTCTCAGCGCCAAGCTACGAAAGATGCTGGTACCATT GCTGGTCTAAATGTTGTAAAAATAATCAATGAGCCTACTGCTGCAGCTCTAGCATATGGACTTGAAAAGAGGGCTAATTG TGTTGGAGAGAGAAATATTTTCGTCTTTGATCTTGGTGGTGGAACATTTGATGTGTCACTCCTCACCATCAAGGGTGAAA TCTTTGAAGTCAAAGCCACTGCTGGAGACACGCACCTTGGAGGAGAAGACATTGATAACAGAATGGTGAACTACTTTGTT AAGGAGTTGAAGAGGAAGAACAAAGTGAACATTACTGGGAATGCAAGAGCCTTGAGAAGGTTGAGAACTGTATGTGAGAG GGCAAAAAGGACACTTTCATTTGCCATTGATACTACCATTGAGGTAGATGCTATATTTGAGAGCATTGACTTGTGTTCAT CAATTACTCGCGCCAGATTTGAGGAACTCAACATGGACCTCTTTAAAAAGTGTATGGAGACTGTTGAGAGGTGTCTTAAT GATTCTAAGATGGACAAAAATAGTATCCATGATGTTGTCCTTATTGGTGGCTCTTCTAGGATTCCCAAAGTGCAGCAGCT ATTGCAGGACTTCTTCAGTGGAAAGGAACTATGCAAGGGGATCAATCCTGATGAGGCTGTTGCTCATGGTGCAGCTGTCC AGGCTGCGTTGTTGAATAAAGGCATTAAGAATGTTCCAAACTTGGTGCTATTGGATGTGACACCACTTTCACTTGGTATA TCGGTAAAAGGAGGTCTGATGAGTGTGGTGATTCCAAGGAATACCACTATTCCTTCGAAGAAGATAGACACATACTTAAC TAGTGAAGATAACCAAACCAGTGTCCTGATTGAGGTTTATGAGGGTGAGAGGAAAAGAGCCAGCGATAACAACTTGCTTG GTTTGTTTAACCTTAATGGCATTCCTTCTGCTCCTGCAGGCCATCCTTTAAATGTATGCTTCGATTTAGATGCTAATGGT ATCCTAAATGTCTCGGCTGAAGAAGAAACCACTGGTATTAAGAATGGGATTACCGTAACCAATGACAATGGAAGACTATC TTCTGAACAAATTATGAGATTGATTCAAGAAGCTGAGAAACACCGGGCTGAAGATAGGATGTATGAGAAGAAAGTTGAAG CAATGAATGCTTTGGATGACTATGTTTACAAGTTAAGGAATGCTATAAAGGATATTGATAGAAGTTCTAAGCTTCGTCTA CAAGATAAAAGTAAGATCAGAGTGGCAGTTACAAAGGCCAGAAATTTGCTTGGTACTAGCGACCAGACAGAGACAGAGGT GTTTGAAGATTATTTGAATGAGATGGAGGGCATTGTAGAATCCATTGTCAAGATTGACTAGTTACTTTCTTCTTCTGTTT TGTATTTGGTCCAATGTTACTTTATAGATTATGTGATGGGTATGAAATATCCAAAACTGCGTGTACCATATTATCTATAC AAACTCCTTTGATTTCTGTTTTTGGAATCGAATTCAAGCTAATCGGGAGAACATGGAACAAGTTGCTTGCATAATTTATA CTTATATGGAGTTTAAAGCAAGTAAAGAAATGAAGCTCATGTCAATTGGAAAAATCCCAGATTCAGAGTTAACGACCACA AAGGCAATTTATGCTGCTATATCCTTCTTGGCCAATTCTCCATAAAAATAACTCCTCCTTGTTTTCTACTAAGATATTTG CGAAACATTGTTTCTGTTGTCATCTAAGCAATTATATAGGACCAAAATTCTTGAGGTCACATAGAAAAATTATTAGGCTT TCTAAGAATTGTGTCTGCTTGTTAACAAGTTCAGAGTTTACGAATTTATGTTTCCAAATATGCAGTATGGCTGCTACGCT TTTCCAGACATGTTTTTCTAATTATGGATGATATAACTTTAAACAACACTCAAAAACTCGGCCCCCCTGGGAGTCCAGTT GCATTTTCCAATATAGAAAGAAGCAATGTGTTTAGTTGCATGTTTGTTTCTCCGTTTGCACCATCCCAATCCAAACATGA TTTCACATACCACCCTTAACACACAAACAGAGAAGCAGGATTTTATAGCGTTGAGTTGATGTAGATCAACTTTAAGTTCA ACTGAAATACAACTGCACACTAAGTTGCTATGCAAAGAATTTGTAAGAAAAGCAAAAAATGAACCTGTAAGCACCCGCCA TCCTGCATGTCATCGTAGCATCCAATAGGCTGACCATCACCCATGGGGCCATGAGACCAAAGTACATTGCTCGTCCTATC AGCTCACGATCGAATGCCACATTCATTCCACACCTGGGAAACGAAGTTCTCTTTGGTATGGTCATAACTCATAAGTCATA ACCATATCCACATACCTCAAGCATAATAATCACAAGACTTAGAATCAAACTGACATATAAGCTAATAGTTTTTTTAATTT GTTCATAAGAGTACAAGCACAACTAGTACCTAGTGTTTCTCTCATGAGGCTTCACATCAGTATCAGCTATTGATGCATAT CAGCAGACAACTACAAAAAAATTTGAAATCTGAGTGATTACCTAAATATCCAAGCTGTCTCTTGTGATCTTTATTCCATC CAGATTCACCCCTTCACGTTTCAATAGAGTTCCTAAACATATTGGTCCTCGAATAACTCCTAATAATAGCATTCCACACA AACACATCCGGGTGGGCAAAATCATCAAACTGTTTACGGGCATAACAAATTCTTTCAATAGTTGTGATAACCTCAACATA TCTTCCAGCAACCACAACATATATAAACATTTAAAACCAGTAAATAGCATGAAAATATGATCTAACTTTATCATATAAAA AATAAAAACTAAAATGAATGAAATGTATAAGGTGCATCATTTTAAAAGCTGTCAACTGATTAACCATTTTATTTGACCGT TAGAAATAATATTAGACAAAGTTAACGACATGTCCAAGGTGAGAAGCTGATGAAGAACAAAGATGTTTGACAAGCTTGAG GTACAAGCAGCATGTGGGTTGTTGTTTGCAAGATGGTGAATGAAGAGTGAAGACGTCACTTTTGTGCTCTTGAAAACACT CACATCAATTGGATCTGGTGTAAAGGAATGGATCAGATGATTTTATTCCTCAAAAAGCACCTACAAGTACTCCTAGAATC GTGCCTCTAATTACAGCTGGAGATTCTATCTATAATTACATAATACCTTAAATACAACATGTCTAACTACAACAAGAATC AATTCTAACTAGACTTAGACCCGCGCATCGCGCGGCTGCTAAAATTAATTTCTTTCTTATCAAGTTAAAGTGGTACATGT TAGTTTGTTAAAAATACCAATGAACCATTAAAATGTGTATATTGTTTTAGTAAAGACCTCTCTTGTCGGCATGCATTTTT TGGTGAGTACAATTTGAGCTTTTTCTACATTCACTTTCCTTCTTTTCTTTTATGGAAGATCTTAATTTAAAGCATATATA AATATAATAATTTTTTTTGTTATTTAATGTGAAATTTGATGGGTAGTGATAGAGTTTGTGTGTTTTTTTTTTCTTTCTTG TAGCATACTCTTGAAAAAAAAAATATTATCACAGCAATTGAAAAGCATAACTTGCCCGTGATCAAAACCACTTGCCCGTG ATCAAAACCACTATCAGACATAAAGAATCCATATACAACTTGTACATGACTATAGTCCAATGTTCAATACGGACACATAT TTTAAATAAATAATTTGTTTAGATTGGTTTCATGATGAATGACCCTTGATGTATTCAGCATGTTTGTTGAAATGCTTAGG GCATCACAATATTAGTGTGCATGAAGTTTGTAACTTCAAAATTCCAAAATCAAACCTCTTACAGCATAGCACAATACTTA TGACCACATTTAATTCAAGAATAACAACTCAAACCTATTTTTAACACAGCGTCATGTTTTTTGACTAAAGACTCTACTGC ACAAAGGCAAAACCAAAAACCAGGAGCAATTGTCACACGAATATGTTGGTCACAAGTGTTGTATAAATAAGCCTTGTGCT GAAACAGGCACTTAAAACTAAGAAAGTTATGCAAAAGCTAAATAAGCAGATGAACCTCTATCAATCAAACTTGTTTATGG TCTTAACTCTGGACCCTTGACTCCCCCTGGTCTTCTGCTGCTGCTCTTAGTTTCTTTTTCCCCTCTGTTTTGAGGCTGTT GTTTGCTGTTTGCTTTGCTCTGCTTTGTGCCTTTGTTGTCGTTTTGTTGGCTAGTTGGTATCTTCCGGAATGCTGGCCCT TTACGGCCCTTGATGCTCAACCAGCGACCTCTAATATGCAGTCCTGGTGCGCTCTTCCTGTGTTTGTTCTTGGCTGTTAC ATCTGTCTCGTTTTGCTCTATGGCTGCTGCTTATTTCTTTGTGCTTCTGGTTTGGGTTTTAGTGATTTTGCTGTAGTTGC TGGTTGTTTCTCGTTTCCCACTGTTGTCCCAATCATGTTATTGTACCATGTCTTTTGTCTTTGGATCCTTTTGATGTTCA CTCTTGCTTTTATTTATGTCTTGTATTCCTCACTTGGGAGAGGTTTTTTCCCTTGGACTGTTTCTTTTTAATCAATCCTT CTCTTTTCTAAAAATACTAATGGACCCTTGACTAATTAAGTAAAAATTGTATCAGTAAAAACATCTAGAGTTCAAATAAG CCATTGTAAGGAAGGTTGAAAGTACATGATAAATTAGAACCTCACTTGAACTGGAAAATATATGCAGCATATAGACATCC ACTTGAGCTTCAACAGTTAGAAAACGCGGAAGAGTGCTCACACATTCTATAGAAAGAAACCATTTCCTCAAGTCCTCCCT TGACATGGGAGTCAGTAATGGAGTAATTTAGTACAAATGAAATAATTTTGAAATGTATTTAGATTCTCATCATTGTAATG TTTCTTTAATCTACGCTAATATGTTTCAGGTTGTTCTTGTTCCTTATTTTGGTGTTTGTAAATTGTCATTCAGGAAAAAT TAGTGTTTTAAAAATACAAGGGTGTTAATGGTCTTAGTTTCTCATCATTACCAATTTGAAGAAACACATACAGATATACA TGATTTGGATACAATATTAAATTAAAAAAATAAAGAACTGATTGCATGTTTAAGATCTTCAATTCAATACTACACTAAAG TTACCGCAAGCCTGGAACCAGAAATTAACTGAAGTAAATTCTTCGGTGTGCTCTAGAAATTTAACCAAAAATAAAAAGAA AGATATCAGGAGCACCGGACAGAGTTAAAAGCGTAATAGCTTATCCAAGGCATGAGCGATCACTGGAAGCATATGGTTGC TTTGCGCAATGAGCAGATCTCTAGAATTGGAAGAAGCAGAGAACATGATAGTTGAAAGAAGGAGGAAGAAATCTGACCTC GAAGGCGAAGGATGCCCAATGACTCGAATTGGGGAACAGAGCGAGCGATACAATGGAGACACGCTTTCCTTCTTCTCTTG TAGTGAGGAAGCCAAAACCGTAAAACTGCGAGTTTGAGGGGGACCGTTTGAAGAATATAATTGCAAGGCGAGGTCGGGGA TTAATTACGAGAGATGAGATCAAAGGGTTGAGAAATCAGAATGTGGTGAAGAAAGAAGAAACCTCACACGTAAGCTAATA ATCTCATGTGGCAAGTTAAGGTGAGAAAAAATTGATGAGTTGTCGGCGCTACATTACGCGCTTCACAATTCCTAT
CDS sequence (LotjaGi1g1v0539900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAGGCAAGATGAGGGATTGGTGATAGGAATCGACCTCGGCACGACGTACTCATGTGTTGCAGTATGGGAAGAGCA ACACTGTCGAGTGGAGATCATCCACAATGACCAAGGAAACAAAACCACTCCTTCTTTTGTTGCTTTCACAGATCACCAAA GATTGATTGGCGATGCTGCTAAAAATCAGGCTGCAACAAACCCAGCAAACACTGTCTTTGATGGGAAGAGGTTAATTGGA AGAAAATATAGTGATCCAGTTATTAAAGATGATCTAATGTTTTGGCCATTCAAGGTCATTGCTGGTGCTGATGACAAACC CATGATCATTATTAAGCACAAGGGACAGGAGAAGCATATTTCTGCTGAGGAAATTTCTGCCACAGTCCTGACAAAGATGC GCGAGACTGCAGAGGCATATCTGGAGTCACCAATAAAGAATGCTGTTGTTACAGTGCCTGCTTATTTCAACGACTCTCAG CGCCAAGCTACGAAAGATGCTGGTACCATTGCTGGTCTAAATGTTGTAAAAATAATCAATGAGCCTACTGCTGCAGCTCT AGCATATGGACTTGAAAAGAGGGCTAATTGTGTTGGAGAGAGAAATATTTTCGTCTTTGATCTTGGTGGTGGAACATTTG ATGTGTCACTCCTCACCATCAAGGGTGAAATCTTTGAAGTCAAAGCCACTGCTGGAGACACGCACCTTGGAGGAGAAGAC ATTGATAACAGAATGGTGAACTACTTTGTTAAGGAGTTGAAGAGGAAGAACAAAGTGAACATTACTGGGAATGCAAGAGC CTTGAGAAGGTTGAGAACTGTATGTGAGAGGGCAAAAAGGACACTTTCATTTGCCATTGATACTACCATTGAGGTAGATG CTATATTTGAGAGCATTGACTTGTGTTCATCAATTACTCGCGCCAGATTTGAGGAACTCAACATGGACCTCTTTAAAAAG TGTATGGAGACTGTTGAGAGGTGTCTTAATGATTCTAAGATGGACAAAAATAGTATCCATGATGTTGTCCTTATTGGTGG CTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCAGGACTTCTTCAGTGGAAAGGAACTATGCAAGGGGATCAATCCTG ATGAGGCTGTTGCTCATGGTGCAGCTGTCCAGGCTGCGTTGTTGAATAAAGGCATTAAGAATGTTCCAAACTTGGTGCTA TTGGATGTGACACCACTTTCACTTGGTATATCGGTAAAAGGAGGTCTGATGAGTGTGGTGATTCCAAGGAATACCACTAT TCCTTCGAAGAAGATAGACACATACTTAACTAGTGAAGATAACCAAACCAGTGTCCTGATTGAGGTTTATGAGGGTGAGA GGAAAAGAGCCAGCGATAACAACTTGCTTGGTTTGTTTAACCTTAATGGCATTCCTTCTGCTCCTGCAGGCCATCCTTTA AATGTATGCTTCGATTTAGATGCTAATGGTATCCTAAATGTCTCGGCTGAAGAAGAAACCACTGGTATTAAGAATGGGAT TACCGTAACCAATGACAATGGAAGACTATCTTCTGAACAAATTATGAGATTGATTCAAGAAGCTGAGAAACACCGGGCTG AAGATAGGATGTATGAGAAGAAAGTTGAAGCAATGAATGCTTTGGATGACTATGTTTACAAGTTAAGGAATGCTATAAAG GATATTGATAGAAGTTCTAAGCTTCGTCTACAAGATAAAAGTAAGATCAGAGTGGCAGTTACAAAGGCCAGAAATTTGCT TGGTACTAGCGACCAGACAGAGACAGAGGTGTTTGAAGATTATTTGAATGAGATGGAGGGCATTGTAGAATCCATTGTCA AGATTGACTAG
Protein sequence (LotjaGi1g1v0539900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARQDEGLVIGIDLGTTYSCVAVWEEQHCRVEIIHNDQGNKTTPSFVAFTDHQRLIGDAAKNQAATNPANTVFDGKRLIG RKYSDPVIKDDLMFWPFKVIAGADDKPMIIIKHKGQEKHISAEEISATVLTKMRETAEAYLESPIKNAVVTVPAYFNDSQ RQATKDAGTIAGLNVVKIINEPTAAALAYGLEKRANCVGERNIFVFDLGGGTFDVSLLTIKGEIFEVKATAGDTHLGGED IDNRMVNYFVKELKRKNKVNITGNARALRRLRTVCERAKRTLSFAIDTTIEVDAIFESIDLCSSITRARFEELNMDLFKK CMETVERCLNDSKMDKNSIHDVVLIGGSSRIPKVQQLLQDFFSGKELCKGINPDEAVAHGAAVQAALLNKGIKNVPNLVL LDVTPLSLGISVKGGLMSVVIPRNTTIPSKKIDTYLTSEDNQTSVLIEVYEGERKRASDNNLLGLFNLNGIPSAPAGHPL NVCFDLDANGILNVSAEEETTGIKNGITVTNDNGRLSSEQIMRLIQEAEKHRAEDRMYEKKVEAMNALDDYVYKLRNAIK DIDRSSKLRLQDKSKIRVAVTKARNLLGTSDQTETEVFEDYLNEMEGIVESIVKID
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 5 | 613 | 609 | 7.5E-296 | – | |
PANTHER | 5 | 613 | 609 | 7.5E-296 | ||
SUPERFAMILY | 8 | 193 | 186 | 1.6E-65 | ||
PRINTS | 8 | 21 | 14 | 1.4E-73 | – | |
Pfam | 9 | 613 | 605 | 4.5E-220 | ||
Gene3D | 10 | 385 | 376 | 3.8E-160 | – | |
ProSitePatterns | 12 | 19 | 8 | - | ||
PRINTS | 38 | 50 | 13 | 1.4E-73 | – | |
PRINTS | 60 | 68 | 9 | 1.4E-73 | – | |
Gene3D | 73 | 128 | 56 | 3.8E-160 | – | |
PRINTS | 148 | 168 | 21 | 1.4E-73 | – | |
Gene3D | 194 | 368 | 175 | 3.8E-160 | – | |
SUPERFAMILY | 200 | 388 | 189 | 8.22E-62 | ||
ProSitePatterns | 205 | 218 | 14 | - | ||
PRINTS | 211 | 221 | 11 | 1.4E-73 | – | |
Gene3D | 237 | 320 | 84 | 3.8E-160 | – | |
PRINTS | 339 | 355 | 17 | 1.4E-73 | – | |
ProSitePatterns | 342 | 356 | 15 | - | ||
PRINTS | 371 | 391 | 21 | 1.4E-73 | – | |
Gene3D | 389 | 515 | 127 | 4.8E-49 | ||
SUPERFAMILY | 394 | 549 | 156 | 1.44E-51 | ||
PRINTS | 397 | 416 | 20 | 1.4E-73 | – | |
PRINTS | 477 | 493 | 17 | 1.4E-73 | – | |
Gene3D | 516 | 615 | 100 | 2.7E-19 | ||
SUPERFAMILY | 543 | 613 | 71 | 4.12E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0539900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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