Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0539900 |
| Transcript ID | LotjaGi1g1v0539900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|Q9LHA8|MD37C_ARATH Probable mediator of RNA polymerase II transcription subunit 37c; TrEMBL-Plants: tr|A0A151S7J1|A0A151S7J1_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0539900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:106856652..106861574) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGAACCAAGGTCTCTAGCATTTTAAGATTTTGGACTGCAAAGATGTAAGATATCTCATCTATCAATGTTATTCCTTT CGCCTTTTCTTGTTTTGATGTTGCTTGTTCTGCTCTCTCCAGCCATGTTAAGAATGCAATGAATTGTTAGTTAGCTATTT ATTTTTTAAGTTTGTTCCCGAGCTTGAATTCACTCCAATTTTTATCTTGTACATATTGGCCATCTTTTCTGGCTCTTATA GTCAACCAAGGAATCATAACCAGCATTAAACACAGTAAAATTAACACTTTGGCCTATACGACCTTAAACCCCCATCCATA TAATTTTCTGAAATCCCTTTTGAGTTCCTTACAAATTCAAGGCCAAAATTTAACAGAACAGAGTTCGTCTTCCATTATCT ATCCAACCAAGTCGCGAGTCCCCGGATAAGGATATTGGGAGCATGTAGTGCTGTTTTTTTGTCTTCTTTAGGCTTTGGTT TTGGCTGGAGTTGCTTTGTTATTTCTTTTGTTAAGTCTGTTGGGGTGGTTTTTTCCTCTTTTGGCGGGCTCTTTGCTCAG GCTAGAGTCTTTTTGATTAGCCTTTTATTGAGAGGTTTTGTATCTCGATAACTCATCATTTCAATAAAACTTTTGCTTTA GAAAAAAAAGATTTTGGGTTGTGGTTGCCATGTTAACATTTTATATATTTCTCCCTTCATACATACTCCTTCCAATCATT TTTATAAGAAAAACTTTAACAAAATCACACAAATCAATGAAACTAATATTGGGTGCTTGTAATTTCCCTTTAAATTTTTG TATGAGGAATGAGTCTCTTTGCATTTGAATGAATTATTTGACTTAATTTTGTAATAGTATTTTTTATAAAAATGAAAAAA AAAATTTCAAAGTGTTTCTTATAAAAATGATTGGATGAAGTATTAAATAAATGTGAATTAAAACCGTTTTAAATCTTACT CACCGTTTTAATTTTTCATAAATTTCTCATTGATGAAAACCAAAATGGGTTCTTCTATGGTACTAAATAGCTTCCTGCGT CTGACTGCAGTTGAAAGAGAATGGCAAGGCAAGATGAGGGATTGGTGATAGGAATCGACCTCGGCACGACGTACTCATGT GTTGCAGTATGGGAAGAGCAACACTGTCGAGTGGAGATCATCCACAATGACCAAGGAAACAAAACCACTCCTTCTTTTGT TGCTTTCACAGATCACCAAAGATTGATTGGCGATGCTGCTAAAAATCAGGCTGCAACAAACCCAGCAAACACTGTCTTTG GTAATAAATTTTTCTTTTGTTAATGGACTCATTTCAATGATTATTTTGATGTTGCTTTTAATTGAACAAATATATGGTCA CATTTTTTTATAAGCAAAGTGCATTATAGCAAGCACAAGCGTGCTTGAATCCTATAACAAATAGGCTTAATTGCACTTTT CGTCCCTCATCTATACCTCTTGTGCAAATTTGGTCCCCTTTGTTTAAAAGGAGCAATTTTGGTACATCAAAGAATAGGAT GTGACAATTAGGTCCGCCGTTAGCTTCCGTCCAATTTTAAACGGAATATTCTTATTGAGATTTTTTTTATTACACCACCA TAACACATCAGCAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAATAAAACAAATTAAATAAAGAA TGAAATTAAACGTATTGAACCCTAATCCCAATTTTCCCCAGCCACCATCACTCTCAACTCCCTTGAATCCTCCATCATCC ACAACCAACATTTTCCTCCACCTTCGAGCATCTTCATCGTCCTCCCCTTCATCTTCACACACGTAGAGAGACAAATCCAG ATCGAGAGAATCGGTGGTGCGTCTCCAAATAGAGAGAAAATGTCGGTGCTTCTCCAGATCGAGAGAAAGGGAAGCGGGGA AAGGGTGGACGCACAACAAGGAGAGAGACTTGATGCGAGCTTTGATGGTGTTGGTGAAGATGGTGCGGTGCGTGATGCCA TGGCCAAGGAGCGGTTCTGTCAACGACGACCATGGTCTGAACCTCGACTGTGGGCTGGATCGAGGTTGCGCGGCGGTGAC AAAAGTATGCTCTGCGGCGAAAGTTGGTGGCTGAGATGAGATTAGGGCCTCTGTTCTTTATGGTATGTTGGAATTTATGT TGTGGTTCCAGAATTTATGTTATGGGTTTGAATCAGATGCAATTTCAGATTGGAATTTGTGGTGGTGAAAAGTTTTGCAG CAGGGCTTAGTGGTGGAGAAGAAAGAGGTGATATGCAGAGGATTGCTTTGGGTTTATTGTTTGGATCAGCAAGGATAAGT TGAAAGGTTTTTGTTGTTGATTAATTCCAGATGAAGATGGAGGTTTTTTTTTTGAACGTATGAAGATGGAGGTTGATTAG ATTAATAATTTGATTACGATTAAAGTTAAATAAATTTTGATTTTTTTGATTTTTAAATTTTAATTACTTTTATGTTGTAT TACGTGGAGTCCTAGTGGCATCTAAGTGGCAAAATGTGTTAGGGCCACGTTATGAATGAGCGCCACGTATGAAAAATCTG TTAGGAATTGAACGGAATCTAACGGAAGGATCAAATTGTCACAAATTGATCTTTGATGTACCAAAATTGCTCCTTTTAAA TAAAAGGGACCAAAATTGCACAAGAGGCATAGATGAGGGACGAAAAGTGCAATTAAGCCTAACAAATATATGGCAACATA ACTCATGATTGTTACCTTTACGGCAAAAAATATCATTTTATCAAGTGCTCAAGTTTGCTCTCTAACTTTACCTTGTTTCA AATTATTTCTTTCAAGTTATTAAATTAATAGTGTTTTGTTTTCTGCTAGGCTACCTTGACTTGATTAACATCATTAACAA ATAATTCCTAACTTGTTCCTATGTGACACTGATTATGTTTTGAAGATGGGAAGAGGTTAATTGGAAGAAAATATAGTGAT CCAGTTATTAAAGATGATCTAATGTTTTGGCCATTCAAGGTCATTGCTGGTGCTGATGACAAACCCATGATCATTATTAA GCACAAGGGACAGGAGAAGCATATTTCTGCTGAGGAAATTTCTGCCACAGTCCTGACAAAGATGCGCGAGACTGCAGAGG CATATCTGGAGTCACCAATAAAGAATGCTGTTGTTACAGTGCCTGCTTATTTCAACGACTCTCAGCGCCAAGCTACGAAA GATGCTGGTACCATTGCTGGTCTAAATGTTGTAAAAATAATCAATGAGCCTACTGCTGCAGCTCTAGCATATGGACTTGA AAAGAGGGCTAATTGTGTTGGAGAGAGAAATATTTTCGTCTTTGATCTTGGTGGTGGAACATTTGATGTGTCACTCCTCA CCATCAAGGGTGAAATCTTTGAAGTCAAAGCCACTGCTGGAGACACGCACCTTGGAGGAGAAGACATTGATAACAGAATG GTGAACTACTTTGTTAAGGAGTTGAAGAGGAAGAACAAAGTGAACATTACTGGGAATGCAAGAGCCTTGAGAAGGTTGAG AACTGTATGTGAGAGGGCAAAAAGGACACTTTCATTTGCCATTGATACTACCATTGAGGTAGATGCTATATTTGAGAGCA TTGACTTGTGTTCATCAATTACTCGCGCCAGATTTGAGGAACTCAACATGGACCTCTTTAAAAAGTGTATGGAGACTGTT GAGAGGTGTCTTAATGATTCTAAGATGGACAAAAATAGTATCCATGATGTTGTCCTTATTGGTGGCTCTTCTAGGATTCC CAAAGTGCAGCAGCTATTGCAGGACTTCTTCAGTGGAAAGGAACTATGCAAGGGGATCAATCCTGATGAGGCTGTTGCTC ATGGTGCAGCTGTCCAGGCTGCGTTGTTGAATAAAGGCATTAAGAATGTTCCAAACTTGGTGCTATTGGATGTGACACCA CTTTCACTTGGTATATCGGTAAAAGGAGGTCTGATGAGTGTGGTGATTCCAAGGAATACCACTATTCCTTCGAAGAAGAT AGACACATACTTAACTAGTGAAGATAACCAAACCAGTGTCCTGATTGAGGTTTATGAGGGTGAGAGGAAAAGAGCCAGCG ATAACAACTTGCTTGGTTTGTTTAACCTTAATGGCATTCCTTCTGCTCCTGCAGGCCATCCTTTAAATGTATGCTTCGAT TTAGATGCTAATGGTATCCTAAATGTCTCGGCTGAAGAAGAAACCACTGGTATTAAGAATGGGATTACCGTAACCAATGA CAATGGAAGACTATCTTCTGAACAAATTATGAGATTGATTCAAGAAGCTGAGAAACACCGGGCTGAAGATAGGATGTATG AGAAGAAAGTTGAAGCAATGAATGCTTTGGATGACTATGTTTACAAGTTAAGGAATGCTATAAAGGATATTGATAGAAGT TCTAAGCTTCGTCTACAAGATAAAAGTAAGATCAGAGTGGCAGTTACAAAGGCCAGAAATTTGCTTGGTACTAGCGACCA GACAGAGACAGAGGTGTTTGAAGATTATTTGAATGAGATGGAGGGCATTGTAGAATCCATTGTCAAGATTGACTAGTTAC TTTCTTCTTCTGTTTTGTATTTGGTCCAATGTTACTTTATAGATTATGTGATGGGTATGAAATATCCAAAACTGCGTGTA CCATATTATCTATACAAACTCCTTTGATTTCTGTTTTTGGAATCGAATTCAAGCTAATCGGGAGAACATGGAACAAGTTG CTTGCATAATTTATACTTATATGGAGTTTAAAGCAAGTAAAGAAATGAAGCTCATGTCAATTGGAAAAATCCCAGATTCA GAGTTAACGACCACAAAGGCAATTTATGCTGCTATATCCTTCTTGGCCAATTCTCCATAAAAATAACTCCTCCTTGTTTT CTACTAAGATATTTGCGAAACATTGTTTCTGTTGTCATCTAAG
CDS sequence (LotjaGi1g1v0539900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTGGCCATTCAAGGTCATTGCTGGTGCTGATGACAAACCCATGATCATTATTAAGCACAAGGGACAGGAGAAGCA TATTTCTGCTGAGGAAATTTCTGCCACAGTCCTGACAAAGATGCGCGAGACTGCAGAGGCATATCTGGAGTCACCAATAA AGAATGCTGTTGTTACAGTGCCTGCTTATTTCAACGACTCTCAGCGCCAAGCTACGAAAGATGCTGGTACCATTGCTGGT CTAAATGTTGTAAAAATAATCAATGAGCCTACTGCTGCAGCTCTAGCATATGGACTTGAAAAGAGGGCTAATTGTGTTGG AGAGAGAAATATTTTCGTCTTTGATCTTGGTGGTGGAACATTTGATGTGTCACTCCTCACCATCAAGGGTGAAATCTTTG AAGTCAAAGCCACTGCTGGAGACACGCACCTTGGAGGAGAAGACATTGATAACAGAATGGTGAACTACTTTGTTAAGGAG TTGAAGAGGAAGAACAAAGTGAACATTACTGGGAATGCAAGAGCCTTGAGAAGGTTGAGAACTGTATGTGAGAGGGCAAA AAGGACACTTTCATTTGCCATTGATACTACCATTGAGGTAGATGCTATATTTGAGAGCATTGACTTGTGTTCATCAATTA CTCGCGCCAGATTTGAGGAACTCAACATGGACCTCTTTAAAAAGTGTATGGAGACTGTTGAGAGGTGTCTTAATGATTCT AAGATGGACAAAAATAGTATCCATGATGTTGTCCTTATTGGTGGCTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCA GGACTTCTTCAGTGGAAAGGAACTATGCAAGGGGATCAATCCTGATGAGGCTGTTGCTCATGGTGCAGCTGTCCAGGCTG CGTTGTTGAATAAAGGCATTAAGAATGTTCCAAACTTGGTGCTATTGGATGTGACACCACTTTCACTTGGTATATCGGTA AAAGGAGGTCTGATGAGTGTGGTGATTCCAAGGAATACCACTATTCCTTCGAAGAAGATAGACACATACTTAACTAGTGA AGATAACCAAACCAGTGTCCTGATTGAGGTTTATGAGGGTGAGAGGAAAAGAGCCAGCGATAACAACTTGCTTGGTTTGT TTAACCTTAATGGCATTCCTTCTGCTCCTGCAGGCCATCCTTTAAATGTATGCTTCGATTTAGATGCTAATGGTATCCTA AATGTCTCGGCTGAAGAAGAAACCACTGGTATTAAGAATGGGATTACCGTAACCAATGACAATGGAAGACTATCTTCTGA ACAAATTATGAGATTGATTCAAGAAGCTGAGAAACACCGGGCTGAAGATAGGATGTATGAGAAGAAAGTTGAAGCAATGA ATGCTTTGGATGACTATGTTTACAAGTTAAGGAATGCTATAAAGGATATTGATAGAAGTTCTAAGCTTCGTCTACAAGAT AAAAGTAAGATCAGAGTGGCAGTTACAAAGGCCAGAAATTTGCTTGGTACTAGCGACCAGACAGAGACAGAGGTGTTTGA AGATTATTTGAATGAGATGGAGGGCATTGTAGAATCCATTGTCAAGATTGACTAG
Protein sequence (LotjaGi1g1v0539900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFWPFKVIAGADDKPMIIIKHKGQEKHISAEEISATVLTKMRETAEAYLESPIKNAVVTVPAYFNDSQRQATKDAGTIAG LNVVKIINEPTAAALAYGLEKRANCVGERNIFVFDLGGGTFDVSLLTIKGEIFEVKATAGDTHLGGEDIDNRMVNYFVKE LKRKNKVNITGNARALRRLRTVCERAKRTLSFAIDTTIEVDAIFESIDLCSSITRARFEELNMDLFKKCMETVERCLNDS KMDKNSIHDVVLIGGSSRIPKVQQLLQDFFSGKELCKGINPDEAVAHGAAVQAALLNKGIKNVPNLVLLDVTPLSLGISV KGGLMSVVIPRNTTIPSKKIDTYLTSEDNQTSVLIEVYEGERKRASDNNLLGLFNLNGIPSAPAGHPLNVCFDLDANGIL NVSAEEETTGIKNGITVTNDNGRLSSEQIMRLIQEAEKHRAEDRMYEKKVEAMNALDDYVYKLRNAIKDIDRSSKLRLQD KSKIRVAVTKARNLLGTSDQTETEVFEDYLNEMEGIVESIVKID
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 2 | 101 | 100 | 9.71E-31 | ||
| PANTHER | 2 | 521 | 520 | 7.1E-248 | ||
| Gene3D | 2 | 36 | 35 | 3.6E-122 | – | |
| PANTHER | 2 | 521 | 520 | 7.1E-248 | – | |
| Pfam | 2 | 521 | 520 | 8.0E-180 | ||
| Gene3D | 37 | 293 | 257 | 3.6E-122 | – | |
| PRINTS | 56 | 76 | 21 | 9.6E-53 | – | |
| Gene3D | 102 | 276 | 175 | 3.6E-122 | – | |
| SUPERFAMILY | 108 | 296 | 189 | 9.07E-62 | ||
| ProSitePatterns | 113 | 126 | 14 | - | ||
| PRINTS | 119 | 129 | 11 | 9.6E-53 | – | |
| Gene3D | 145 | 228 | 84 | 3.6E-122 | – | |
| PRINTS | 247 | 263 | 17 | 9.6E-53 | – | |
| ProSitePatterns | 250 | 264 | 15 | - | ||
| PRINTS | 279 | 299 | 21 | 9.6E-53 | – | |
| Gene3D | 297 | 423 | 127 | 3.7E-49 | ||
| SUPERFAMILY | 302 | 457 | 156 | 1.06E-51 | ||
| PRINTS | 305 | 324 | 20 | 9.6E-53 | – | |
| PRINTS | 385 | 401 | 17 | 9.6E-53 | – | |
| Gene3D | 424 | 523 | 100 | 2.1E-19 | ||
| SUPERFAMILY | 451 | 521 | 71 | 3.34E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0539900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…